| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009273 | 3,528,506 | A→C | V241G (GTA→GGA) | envZ ← | sensory histidine kinase in two‑component regulatory system with OmpR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,528,506 | 0 | A | C | 98.4% | 216.7 / ‑4.7 | 64 | V241G (GTA→GGA) | envZ | sensory histidine kinase in two‑component regulatory system with OmpR |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base C (41/22); minor base G (1/0); total (42/22) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.76e-01 | |||||||||||
GCAGGTAGTCGATAAACTGCTCAATGATGGCGTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAGGCACGGGTAACGGAACGCACCTCCGAAGCGCCATACTCACGCAGCGGCGGCGGAATAATCCCTTTACCA > CP009273/3528363‑3528640 | gcAGGTAGTCGATAAACTGCTCAATGATGGCGTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTcccccc < 2:364698/149‑1 (MQ=255) aGGTAGTCGATAAACTGCTCAATGATGGCGTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGc > 2:750912/1‑149 (MQ=255) gTAGTCGATAAACTGCTCAATGATGGCGTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCa > 2:262291/1‑149 (MQ=255) gTAGTCGATAAACTGCTCAATGATGGCGTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCa < 2:1006090/149‑1 (MQ=255) tCGATAAACTGCTCAATGATGGCGTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATcag > 2:196167/1‑149 (MQ=255) gATAAACTGCTCAATGATGGCGTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATcagca > 2:996259/1‑149 (MQ=255) tacaCTGCTCAATGATGGCGTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAGTACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATca < 1:419420/141‑1 (MQ=255) tAAACTGCTCAATGATGGCGTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTCCCCCCCGCCATca > 1:480306/1‑144 (MQ=255) tCAATGGTGGCGTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATcattgagcag < 1:285645/144‑9 (MQ=255) tCAATGATGGCGTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGGGCGCAAGTCCTGACGTCCCCCCGCCCTCAGCCGCGTg > 1:922503/1‑144 (MQ=255) aaTGATGGCGTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCTTCAGCAGCGTGCg < 1:660139/144‑1 (MQ=255) aaTGATGGCGTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCg < 1:201409/144‑1 (MQ=255) aaTGATGGCGTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTcct > 2:291799/1‑147 (MQ=255) tgatgGCGTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGt < 1:330396/144‑1 (MQ=255) tcgtgGCGTTGCACTCTTCGAAATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCCTCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCAACAGCAGCGTGCGGTCATcc < 2:756104/146‑1 (MQ=255) atgGCGTTGCACTCTTCGATATCTTTATTGAGCGATTCTGCCAGATAGCCATCCTGCTCGCTCGTCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATCGGCAGCGCGCGGTCa > 1:931542/1‑144 (MQ=255) agtgCGTTGCCCCTTTCGAATTCTTTATTGATCGACTCTGCCAGATGCCCACTCTGCTCGCTAACGAGCTCAGTCGCCGGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCa < 1:572964/141‑1 (MQ=255) tgGCGTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGcc < 2:533539/149‑1 (MQ=255) ttGCACTCTTCGATATCTTTATTGACCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTg < 2:586201/149‑1 (MQ=255) cACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGCCCGTTGCtt > 2:720575/1‑149 (MQ=255) tctTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAac > 2:720345/1‑149 (MQ=255) ttCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCtt > 1:350130/1‑144 (MQ=255) gATATCTTTATTGATCGATTCTGCGAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCTGCGTGCGCAAGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAg > 2:528509/1‑149 (MQ=255) gATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTTAGTCGCCAGGCGAATACGCGCCAGCGGCGTGCGCACGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAg > 2:817280/1‑149 (MQ=255) atatCTTTATTGATCGATTCTGCTAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAaca > 1:646994/1‑144 (MQ=255) atCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGCCCGTTGCTTAACAcc > 1:347668/1‑144 (MQ=255) atCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACAcc > 1:584773/1‑144 (MQ=255) tttATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCAACCTCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGCCGGTGGCTTCACACCAgc > 1:292036/1‑144 (MQ=255) ttGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTCACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATg < 2:695969/149‑1 (MQ=255) aTCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCCTCCGCCAGTTGCTTAACACCAGCCGCCATATGGtt > 2:28008/1‑149 (MQ=255) aTCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGtt > 2:610889/1‑149 (MQ=255) aTCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGtt > 2:301419/1‑149 (MQ=255) aTCGATTCTGCCAGATAGCCATCCTGCTCGCGCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGGCTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCCGCCGCCata > 1:477760/1‑144 (MQ=255) tCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTa > 2:686292/1‑149 (MQ=255) aTTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAg < 2:465740/149‑1 (MQ=255) ccAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAgg > 1:176029/1‑144 (MQ=255) ccAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAGGCACgg < 2:339740/149‑1 (MQ=255) cAGATAGCCATCCTGCTCGCTCATCATCGCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGCCTTCCCCCCGCCCTCAGCAGCGTGCGGTCATCCACCAGTTGCTTAACACCAGCCGCCAAAAGGTTAAAGGc > 1:282016/1‑144 (MQ=255) cctCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAGGCACGGGTAACGGaa < 2:295008/147‑1 (MQ=255) aTCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAGGCACGGGTAACGGAAc > 2:880973/1‑149 (MQ=255) ccTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAGGCCCGGGTAACGGAACGc > 2:615126/1‑149 (MQ=255) cgctcATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAGGCACGGGTAACGGAACGCACcccc > 2:442014/1‑149 (MQ=255) ctcATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAGGCACGGGTAACGGAACGCCCCTCCGa > 2:528904/1‑149 (MQ=255) tcaccaTCTCAGTCGCCAGGCGAATACGCGTCGGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAGGCACGGGTAACGGGACGCACCTCCGaa < 2:709180/149‑1 (MQ=255) atcctcTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAGGCACGGGTAACGGAACGCACCTCCGAAgc < 2:230858/149‑1 (MQ=255) tcatcTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAGGCACGGGTAACGGAAGGCTCCTCCGAAgcg > 2:793333/1‑149 (MQ=255) tcatcTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAGGCACGGGTAACGGAACGCACCTCCg < 1:24981/144‑1 (MQ=255) tctcAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACAAGCGTTCCTTCATTGTTAAAGGCACGGGTAACGGAACGCACCTCCGAAGCGCCa > 2:754034/1‑149 (MQ=255) tcAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCTCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAGGCCCGGGTAGCGGAACGGACCTCCAAAgcg > 1:2123/1‑144 (MQ=255) tcAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAGGCACGGGTAACGGAACGCACCTCCGAAgcg > 1:721821/1‑144 (MQ=255) tcAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAGGCACGGGTAACGGAACGCACCTCCGAAGCGCCATa > 2:280542/1‑149 (MQ=255) tcAGGCGCCAGCGGAATACGCGTCAGCGGCGTCCGCCTGTCGTGACGTCCCCCCGGCCTCAGCAGCGTGCGGTCATCCGCCAGGTGCTTAACACCAGCCGCCATATGGTTAAAGGCACGGGTAACGGAACGCACCTCCGAAgcg < 1:423822/144‑1 (MQ=255) aGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACAGCAGCCGCCATATGGTTAAAGGCACAGGTGCAGGAAGGCACCTCCGAAGCGcc > 1:97150/1‑144 (MQ=255) tCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAGGCACGGGTAACGGAACGCACCTCCGAAGCGCCAt > 1:369697/1‑144 (MQ=255) aGGCGAATACGGGTCTGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAGGCACGGGTAACGGAACGCACCTCCGAAGCGCCATACTCa < 1:413203/144‑1 (MQ=255) aGGCGAAGACGCGTCGGCGGCGTGCGCAAATCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAGGCACGGGTAACGGAACGCACCTCCGAAGCGCCATACTCa < 1:517156/144‑1 (MQ=255) aaTACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAGGCACGGGTAACGGAACGCACCTCCGAAGCGCCATACTCACGCAg > 1:68300/1‑144 (MQ=255) tACGCGTCAGCGGCGTGCGCAAGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAGGCACGGGTAACGGAACGCACCTCCGAAGCGCCATACTCACGCAgcg < 1:179627/144‑1 (MQ=255) gcggcgTGCGCAAGTCGTGACTTCCCCCCGCCATCAGCAGCGGGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAGGCACGGGTAACGGAACGCACCTCCGAAGCGCCATACTCACGCAGCGGCGGCGGAATAATc < 2:65330/149‑1 (MQ=255) cggcgTGCGCAAGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAGGCACGGGTAACGGAACGCACCTCCGAAGCGCCATACTCACGCAGCGGCGGCGGAAAAAGcc > 2:961694/1‑149 (MQ=255) ggggggaagtcacgACTTGCGCACGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAGGCACGGGTAACGGAACGCACCTCCGAAGCGCCCTACTCACGCAGCGGCGGCGGCATAATCCCttt > 2:193891/14‑149 (MQ=255) aaGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAGGCACGGGTAACGGAACGCACCTCCGAAGCGCAATACTCACGCAGCGGCGGCGGAATAATCCCTTTa > 1:483140/1‑144 (MQ=255) aaGTCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCACCAGTGGCTTAACACCAGCCGCCATATGGGTAAAGGCACGGGTAACGAAACGGACCTCCAAAGCGCCATACTCACGCAGCGGCGGCGGAATAACCCCTTTa > 1:371340/1‑144 (MQ=255) aaGTCGGGACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAGGCACGGGTAACGGAACGCACATCCGACGCGCCATACTCACCCCGCGGCGGCGGAATACTCCATTTa > 1:371352/1‑144 (MQ=255) tCGTGACTTCCCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAGGCACGGGTAACGGACCGCACCGCCGAAGCGCCATACTCACGCAGCGCCGGCGGAATAATCCCTTTAccc > 1:519850/1‑143 (MQ=255) | GCAGGTAGTCGATAAACTGCTCAATGATGGCGTTGCACTCTTCGATATCTTTATTGATCGATTCTGCCAGATAGCCATCCTGCTCGCTCATCATCTCAGTCGCCAGGCGAATACGCGTCAGCGGCGTGCGCAAGTCGTGACTTACCCCCGCCATCAGCAGCGTGCGGTCATCCGCCAGTTGCTTAACACCAGCCGCCATATGGTTAAAGGCACGGGTAACGGAACGCACCTCCGAAGCGCCATACTCACGCAGCGGCGGCGGAATAATCCCTTTACCA > CP009273/3528363‑3528640 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |