| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2686693 | 21 (0.790) | 4 (0.160) | 3/264 | NT | 15.4% | coding (2210/3888 nt) | purL | phosphoribosylformyl‑glycineamide synthetase |
| ? | CP009273 | = 2686756 | 24 (0.940) | coding (2147/3888 nt) | purL | phosphoribosylformyl‑glycineamide synthetase | |||||
CATCGACATGGAGTCTTTACCCACCGGGATCGTCAGGCCCAGCGCCGGACAAAGCTCTTCGCCCACGGCTTTAACGGCTTCATACAGGCCCGCATCTTCACCAGGGTGGCCTGCCGCCGCC‑AT‑‑CCAGT‑TGGCGGAAAGTTTGATGCGTTTGATATCGCCAATTTGTGTTGCGGCGATGTTGGTTAACGCTTCACCGACCGCCAGACGGGCAGAGGCGGCGAAATCCAGCAGCGCAACCGGCGCACGCTCGCCAATCGCCATCGCTTCACCGTAGTAGCTGTC > CP009273/2686560‑2686841 | cATCGACATGGAGTCTTTACCCACCGGGATCGTCAGGCCCAGCGCCGGACAAAGCTCTTCGCCCACGGCTTTAACGGCTTCATAGCGGCGCGCATCTTCGCCAGGGTGGACTGACGCCGCC‑AG‑‑CCCGT‑TGTCGGGCAGTTTggctcgtt > 2:233708/1‑142 (MQ=255) aTCGCCATGGAGTCTTTCCCCCCCGGGATCGTCAGGCCCAGCGCCGGACAAAGCTCTTCGCCCACGGCTTTAACGGCTTCATACAGGCCCGCATCTTCACCAGGGTGGCCTGCCGCCGCC‑AT‑‑CCAGT‑TGGCGGAAAGTTTGATGCGttt < 1:2071/149‑1 (MQ=255) tGGAGTCTTTACCCACCGGGATCGTCAGGCCCAGCGCCGGACAAAGCTCTTCGCCCACGGCTTTAACGGCTTCATACAGGCCCGCATCTTCACCAGGGTGGCCTGCCGCCGCC‑AT‑‑CCAGT‑TGGCGGAAAGTTTGATGCGTTTGATATCg < 2:456965/149‑1 (MQ=255) tGGAGTCTTTACCCACCGGGATCGTCAGGCCCAGCGCCGGACAAAGCTCTTCGCCCACGGCTTTAACGGCTTCATACAGGCCCGCATCTTCACCAGGGTGGCCTGCCGCCGCC‑AT‑‑CCAGT‑TGGCGGAAAGTTTGATGCGTTTGATATCg < 1:80093/149‑1 (MQ=255) ccACCGGGATCGTCAGGCCCAGCGCCGGACAAAGCTCTTCGCCCACGGCTTCAACGGCTTCATACAGGCCCGCATCTTCACCAGGGTGGCCTGCCGCCGCC‑AT‑‑CCAGT‑TGGCGGtcggtgaagcgttaaccaacatcgccgcaacacaa > 2:229108‑M1/1‑114 (MQ=255) aGGCCCAGCGCCGGACAAAGCTCTTCGCCCACGGCTTTAACGGCTTCATACAGGCCCGCATCTTCACCAGGGTTGCCTGCCGCCGCC‑AT‑‑CCAGT‑TGGCGGAAAGTTTGATGCGTTTGATATCGCCAATTTGTGTTGCGGCGATggttgt > 1:142546/1‑144 (MQ=255) gCCCAGCGCCGGACAAAGCTCTTCGCCCACGGCTTTAACGGCTTCATACAGGCCCGCATCTTCACCAGGGTGGCCTGCCGCCGCC‑AT‑‑CCAGT‑TGGCGGAAAGTTTGATGCGTTTGATATCGCCAATTTGTGTTGCGGCGATGTTGGTTa < 1:426392/149‑1 (MQ=255) cccAGCGGCGGACAAAGCTCTTCACCCACGGCTTTAACGGCTTCATACAGGCCCGCATCTTCACCAGGGTGGCCTGCCGCCGCC‑AT‑‑CCAGT‑TGGCGGAAAGTTTGATGCGTTTGATATCGCCCATTTGGGTTGCGGCGACGCTGGTTaa > 2:318375/1‑149 (MQ=255) ccGGACAAAGCTCTTCGCCCACGGCTTTACCGGCTTCATACAGGCCCGCATCTTCACCAGGGTGGCCTGCCGCCGCC‑AT‑‑CCAGT‑TGGCGGAAAGTTTGATGCGTTTGATATCGCCAATTTGTGTTGCGGCGATGTTGGTTAACGCTTCa < 2:418268/149‑1 (MQ=255) ccGGACAAAGCTCTTCGCCCACGGCTTTAACGGCTTCATACAGGCCCGCATCTTCACCAGGGTGGCCTGCCGCCGCC‑AT‑‑CCAGT‑TGGCGGAAAGTTTGATGCGTTTGATATCGCCAATTTGTGTTGCGGCGATGTTGGTTAACGCTTCa < 2:418271/149‑1 (MQ=255) cAACGCTCTTCGCCCACGGCTTTAACCGCTTCATACAGGCCCGCATCTTCACCAGGGTGGCCTGCCGCCGCC‑AT‑‑CCAGT‑TGGCGGAAAGTTTGATGCGTTTGCTATCGCCAATTTGTGTTGCGGCGATGTTGGTTAACGCTTCACCGAc > 1:208681‑M2/1‑148 (MQ=255) aaaGCTCTTCGCCCACGGCTTTAACGGCTTCATACAGGCCCGCATCTTCACCAGGGTGGCCTGCCGCCGCC‑AT‑‑CCAGT‑TGGCGGAAAGCTTGATGCGTTTGATATCGCCAATTTGTGTTGCGGCGATGTTGGTTAACGCTTCACCGAcc > 2:333997‑M2/1‑147 (MQ=255) ttCGCCCACGGCTTTAACGGCTTCATACAGGCCCGCATCTTCACCAGGGTGGCCTGCCGCCGCC‑AT‑‑CCAGT‑TGGCGGtcggtgaagcgttaaccaacatcgccgcaacacaaattggcgatatcaaacgcatcaaactttccgccaact < 1:229108‑M1/149‑73 (MQ=255) cTTTAACGGCTTCATACAGGCCCGCATCTTCACCAGGGTGGCCTGCCGCCGCC‑AT‑‑CCAGT‑TGGCGGAAAGTTTGATGCGTTTGATATCGCCAATTTGTGTTGCGGCGATGTTGGTTAACGCTTCACCGACCGCCAGACGGGCAGAggcg > 1:400814/1‑149 (MQ=255) cGGCTTCATACAGGCCCGCATCTTCACCAGGGTGGCCTGCCGCCGCC‑AT‑‑CCAGT‑TGGCGGAAAGTTTGATGCGTTTGATATCGCCAATTTGTGTTGCGGCGATGTTGGTTAACGCTTCACCGACCGCCAGACGGGCAGAGGCGGCGaaa < 1:268654/149‑1 (MQ=255) tctttctcccggcccgcatcttCAGCAGGGTGGCCTGCCGCCGCC‑TCCGCCCGTCTGGCGGtcggtgaagcgttaaccaacatcgccgcaacacaaattggcgatatcaaacgcatcaaactttccgccaactggatggcggcggcagg < 2:103205‑M1/139‑89 (MQ=255) gCTTCCTACAGGCCCGCATCCGCACCGGGGTGGCCTGCCGCCGCCTCTG‑CCCGTCTGGCGGtcggtgaagcgttaaccaacatcgccgcaacataaattggcgagatcaaacgcatcaaactttccgccaactggatggcggcggcagg < 2:103160‑M1/149‑89 (MQ=255) cTTCATACAGGCCCGCATCTTCACCAGGGTGGCCTGCCGCCGCC‑AT‑‑CCAGT‑TGGCGGAAAGTTTGATGCGTTTGATATCGCCAATTTGTGTTGCGGCGATGTTGGTTAACGCTTCACCGACCGCCAGACGGGCAGAGGCGGCGAAATcc > 1:422575/1‑149 (MQ=255) cAGGCCCGCATCTTCACCAGGGTGGCCTGCCGCCGCC‑AT‑‑CCAGT‑TGGCGGAAAGTTTGATGCGTTTGATATCGCCAATTTGTGTTGCGGCGATGTTGGTTAACGCTTCACCGACCGCCAGACGGGCAGAGGCGGCGAAATCCAGCAgcg < 1:292898/149‑1 (MQ=255) cGCATCTTCACCAGGGTGGCCTGCCGCCGCC‑AT‑‑CCAGT‑TGGCGGAAAGTTTGATGCGTTTGATATCGCCAATTTGTGTTGCGGCGATGTTGGTTAACGCTTCACCGACCGCCAGACGGGCAGAGGCGGCGAAATCCAGCAGCGCAACCg > 1:377556/1‑149 (MQ=255) gcgtCTTCACCAGGGTGGCCTGCCGCCGCC‑AG‑‑CCAGT‑TGGCGGAAAGTTTGATGCGTTTGATACCGCCAATTTGTGTTGCGGAGATGTTGGTTAACGCTTCACCGACCGCCAGACGGGCAGAGGCGGCGAAATCCAGCAGCGCAACCgg < 1:15338/146‑1 (MQ=255) tCTTCACCAGGGTGGCCTGCCGCCGTC‑AT‑‑CCAGT‑TGGCGGAAAGTTTGATGCGTTTGATATCGCCAATTTGTGTTGCGGCGCTGTTGCTTAACGCTTCACCGACCGCCAGACGGGCAGACGCGGCGAAATCCAGCAGCGCAACCGgcgc < 1:286358/149‑1 (MQ=255) tCTTCACCAGGGTGGCCTGCCGCCGCC‑AT‑‑CCAGT‑TGGCGGAAAGTTTGATGCGTTTGATATCGCCAATTTGTGTTGCGGCGATGTTGGTTAACGCTTCACCGACCGCCAGACGGGCAGAGGCGGCGAAATCCAGCAGCGCAACCGgcgc < 1:54527/149‑1 (MQ=255) tCACCAGGGTGGCCTGCCGCCGCC‑AT‑‑CCAGT‑TGGCGGAAAGTTTGATGCGTTTGATATCGCCAATTTGTGTTGCGGCGATGTTGGTTAACGATTCACCGACCGCCAGACGGGCAGAGCCGGCGAAATCCAGCGGCGCAACCGGCGCCCg > 2:73723/1‑149 (MQ=255) cAGGGTGGCCTGCCGCCGCC‑AT‑‑CCAGT‑TGGCGGAAAGTTTGATGCGTTTGATATCGCCAATTTGTGTTGCGGCGATGTTGGTTAACGCTTCACCGACCGCCAGACGGGCAGAGGCGGCGAGATCCAGCAGCGCAACCGGCGCACGCTCg < 1:281347/149‑1 (MQ=255) ggCCTGCCGCCGCC‑AT‑‑CCAGT‑TGGCGGAAAGTTTGATGCGTTTGATATCGCAAACTCGCGTTGCGGCGATGTTGGTTAACGCTTCACCGACCGCCAGACGGGCAGAGGCGGCGAAATCCAGCAGCGCAACCGGCGCACGCTCGCCAATc < 1:223258/149‑1 (MQ=255) ccTGCCGCCGCC‑AT‑‑CCAGT‑TGGCGGAAAGTTTGATGCGTTTGATCTCGCCAATTTATGTTGCGGCGATGTTGGTTAACGCTTCACCGAccgccagacgggcagaggcggcggcaggccaccccggtgcggatgcgggcctgtaggaagc < 2:103160‑M2/149‑62 (MQ=255) ccTGCCGCCGCC‑AT‑‑CCAGT‑TGGCGGAAAGTTTGATGCGTTTGATATCGCCAATTTGTGTTGCGGCGATGTTGGTTAACGCTTCACCGAccgccagacgggcggaggcggcggcaggccaccctgctgaagatgcgggccgggagaaaga < 2:103205‑M2/149‑62 (MQ=255) t‑‑CCAGT‑TGGCGGAAAGTTTGATGCGTTTGATATCGCCAATTTGTGTTGCGGCGATGTTGGTTAACGCTTCACCGACCGCCAGACGGGCAGAGGCGGCGAAATCCAGCAGCGCAACCGGCGCACGCTCGCCAATCGCCATCGCTTCACCg > 1:14546/1‑149 (MQ=255) aGT‑TGGCGGAAAGTTTGATGCGTTTGATATCGCCAATTTGTGTTGCGGCGATGTTGGTTAACGCTTCACCGAccgccaactggatggcggcggcaggccaccctggtgaagatgcgggcctgtatgaagccgttaaagccgtgggcgaa < 1:229108‑M2/149‑78 (MQ=255) gCGGAAAGTTTGATGCGTTTGATATCGCCAATTTGTGTTGCGGCGATGTTGGTTAACGCTTCACCGACCGCCAGACGGGCAGAGGCGGCGAAATCCAGCAGCGCAACCGGCGCACGCTCGCCAATCGCCATCGCTTCACCGTAGTAGCt > 2:378749/1‑149 (MQ=255) ggtcggtgaagcgttaaccaacatcgccgcaacacaaattggcgatatcaaacgcatcaagctttccgccaactggatggcggcggcaggccaccctggtgaagatgcgggcctgtatgaagccgttaaagccgtgggcgaagagcttt > 2:333997‑M1/1‑2 (MQ=255) gtcggtgaagcgttaaccaacatcgccgcaacacaaattggcgatagcaaacgcatcaaactttccgccaactggatggcggcggcaggccaccctggtgaagatgcgggcctgtatgaagcggttaaagccgtgggcgaagagcgttg > 1:208681‑M1/1‑1 (MQ=255) | CATCGACATGGAGTCTTTACCCACCGGGATCGTCAGGCCCAGCGCCGGACAAAGCTCTTCGCCCACGGCTTTAACGGCTTCATACAGGCCCGCATCTTCACCAGGGTGGCCTGCCGCCGCC‑AT‑‑CCAGT‑TGGCGGAAAGTTTGATGCGTTTGATATCGCCAATTTGTGTTGCGGCGATGTTGGTTAACGCTTCACCGACCGCCAGACGGGCAGAGGCGGCGAAATCCAGCAGCGCAACCGGCGCACGCTCGCCAATCGCCATCGCTTCACCGTAGTAGCTGTC > CP009273/2686560‑2686841 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |