| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 225231 | 70 (0.930) | 12 (0.170) | 8/284 | 8.8 | 15.2% | intergenic (+82/‑12) | rrlH/rrfH | 23S ribosomal RNA of rrnH operon/5S ribosomal RNA of rrnH operon |
| ? | CP009273 | 2719583 = | NA (NA) | intergenic (‑36/+57) | rrfG/rrlG | 5S ribosomal RNA of rrnG operon/23S ribosomal RNA of rrnG operon | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAA > CP009273/225083‑225370 | ggCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGAt > 2:533473/1‑149 (MQ=32) ccGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATaa < 2:1074461/149‑1 (MQ=32) cGGGTGTGTCAGCGCAGCGATGCGTTGAGCGAACCGTCACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATaaa < 2:195820/149‑1 (MQ=255) gggTGTGTAAGCGCGGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATaaaa < 2:1165436/149‑1 (MQ=17) gggTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATaaaa > 2:813952/1‑149 (MQ=32) gggTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATaaaa > 2:1050247/1‑149 (MQ=32) gtgtAAGCGCAGCGATGCGTTGAGCTAACCGTTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTGTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGa < 1:52851/149‑1 (MQ=17) gtgtAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGa < 1:813952/149‑1 (MQ=32) tAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAGCGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACCGATTAACTCAGAACGCAGAAGCAGCCTGATAAGAAAGAAtt > 2:1102081/1‑149 (MQ=11) tAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGCCTGATAAAACAGAAtt > 2:789560/1‑149 (MQ=17) tAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAACCGGTCTGATAAAACAGAAtt > 2:437775/1‑149 (MQ=17) aaGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGGAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGACGCGGTCTGATAAAACAGAAttt > 2:1095191/1‑149 (MQ=17) gcgcAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGc > 2:1147711/1‑149 (MQ=32) gcgcAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGc < 1:210814/149‑1 (MQ=32) gcgcAGCGATGCGTTAAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGc > 2:686592/1‑149 (MQ=17) gcAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCt > 2:816533/1‑149 (MQ=32) gcAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCt < 2:233252/149‑1 (MQ=32) gcAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCt > 2:667289/1‑149 (MQ=32) gcAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATATTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCt > 1:530971/1‑149 (MQ=17) aGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTgg < 1:913360/149‑1 (MQ=32) cGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTAGGCCTGATACAGATTAAATACGAACGCAGAACCGGACTGGTAAAACAGAATTTGCCAggag > 1:1070629/1‑147 (MQ=11) aTGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTggcggc < 2:74643/149‑1 (MQ=32) cGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGt < 1:992883/149‑1 (MQ=34) gTTGAGCTACCCGGTACTAATGAACCGTGAGGGTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTa < 2:25941/149‑1 (MQ=21) ttGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAg < 2:542047/149‑1 (MQ=34) gAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAgcg < 2:408189/149‑1 (MQ=34) cTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCgg > 2:195212/1‑149 (MQ=34) cTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCgg > 1:223813/1‑149 (MQ=34) aCCGGTACTAGTGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCggtgg < 2:89367/149‑1 (MQ=21) cGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTc > 2:661794/1‑149 (MQ=34) gTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTccc > 1:408699/1‑149 (MQ=34) tACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCa > 1:187259/1‑149 (MQ=34) acgaaTGTACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGTTTGAAGCAAAAGTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCAc < 1:285641/146‑1 (MQ=11) tAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGTGGATTGGGAGAAGATTTTCAGCCTGATATAGATTAAATCAGAACGCAGGAGCGGTCTGATAAAGCCGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCt < 1:707497/149‑1 (MQ=11) aaTGAACCGTGAGGCTTAACCTTACAACGCCGAAGCGGTTTTGGCGGATTGAGCGACGATTTTCAACACGATCAAAATTAAATCTGACCCCGTAAGCGGTCTGATAGAACGGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTg > 2:309308/1‑149 (MQ=11) tGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGAc < 2:10255/149‑1 (MQ=34) gAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGAcc < 1:12191/149‑1 (MQ=34) tGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTAGTCCCACCTGACCCCATGc > 1:913103/1‑149 (MQ=21) gCTTAACCTTGCACAGCCGAAGCTGTTTTGGAGGATTGAGAGAGGATTTTCAGCCTGATACAGATTAAATCAGAAGGAAGAAGAGGTCTGGTAAACAAGAATTTTCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGaa < 1:175285/149‑1 (MQ=11) gCTTAACCTTCCAACGCCGAAGTTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGaa < 1:180530/149‑1 (MQ=17) gCTTAACCTTACAACGCCGGAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGaa < 2:100857/149‑1 (MQ=21) gCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGGTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTTTGTTTAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCCaa > 1:898130/1‑149 (MQ=11) gCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGaa < 1:179679/149‑1 (MQ=34) gCTTAACCTTACAAAGCCGAAGCTGTTTTTGCGGATTGAGAGAATATTTTCAGCCTGATACAGATTAAATCAGAACGGAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGaa < 1:453965/149‑1 (MQ=255) cTTAACCTTACAACGCCGAAGCTGTTTTGGCGTATTGAGAGAAGATTTTCAGCCTGATACAGATTTTATCAGAACGCCGTAGCGGTCTGATAAAACAGATTTTGCCTGGCGTCCGTAGCGCGGTTGTCCCACCTGTCCCCATGCCGAAc < 1:966733/149‑1 (MQ=11) ttAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGCAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGCCCGTAGCGCGGAGGACCCACCTGAACCCATGCCGAACt > 2:561931/1‑149 (MQ=11) ttAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCCTGCCGAAcc > 2:561885/1‑148 (MQ=21) aaCCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCa < 2:634123/149‑1 (MQ=34) ccTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGa < 2:1079655/149‑1 (MQ=34) cTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGaa < 1:1050247/149‑1 (MQ=34) ttACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAg > 1:1113278/1‑149 (MQ=34) aCAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGACCGCAGAAGCGGTCTGATCAATCAGACTTTGCGTGGCGACCCTAGAGCGGCGAACCCACCTGACCCCAGACCGAACCCAGAAGta > 1:1082298/1‑148 (MQ=11) aaCGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGGGGTCCCACCTGACCCCCTGCCGAAATCAGAAGTGaa > 2:341882/1‑149 (MQ=255) gcGCCGAAGCTGTTTTGGCATATTGCGAAAAGTTTTTCAGCCTGATATATATTAAATCAGAACGCAGAAGCGGTCTGATAAATCAGAATTGGCCTGGCGGCCGTAGCGTGGTGGTCCCACCTTGCCCCATGCCGAACTCAGAAGTGata < 2:534043/148‑3 (MQ=11) cgtcGAAGTTGTTTTGGCGGATTGATGGAAGTTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAAc < 1:1179864/146‑1 (MQ=11) cgcagcaGCCGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATTCCGCACTCAGAACTGacac > 2:296533/7‑149 (MQ=11) gCCGAAGCTGTTTTGGCGGCTTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGAGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACg > 2:193686/1‑149 (MQ=21) gcaGCTGTTTTGGCGGATTGATAGCAGATTTTCAGCCTGATACAGATGTAATGAGAACGCAGAAGCGGTCTGATAAAACAGATTTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCg < 2:589898/147‑1 (MQ=11) ttGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAgc < 2:1076027/148‑1 (MQ=17) cTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATAAGAACGCAGAAGCGGTTTGATAAAACAGAATTGGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAgc < 1:493654/149‑1 (MQ=16) gTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACTGTATTTTCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAgcgc < 1:21420/149‑1 (MQ=12) gTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAgcgc > 1:74345/1‑149 (MQ=32) ttttGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCa > 1:1199435/1‑107 (MQ=33) ttttGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCa < 2:1199435/107‑1 (MQ=33) cGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGt < 1:797708/149‑1 (MQ=32) ccggATACAGATTAAATCAGAACGCAGGAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACGCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCga < 1:725761/146‑1 (MQ=0) cataaCGCAACAGCGGTTTGATAAAACACAATTTGCCTGGCGGCCGTAGCGCTGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAATCGCCGGAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAg < 1:1102081/146‑1 (MQ=1) cAGAACGCAGAAGCGGTCTGATAAAGCAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCGCCTGACCCCATGCGGAACTCAGAAATGAAACGCCGTAGCGGCGATGGTGGTGTGGGGTCTCCGCATGCGGGGGTAaggcaaggcgag > 2:968858/1‑140 (MQ=1) aggaGCCGTCTGATAAAACAGAAGTTGCCTGGCGGCCGTAGCGCGGTGGGCACACCTGACCCCATGACGAACTCAAAAGTGAAACGCCGGAGCGCCGATGGTAGTGTGGGGTCGCCCCATGCGAGAGTAGGGAACTGCCAGGCATCaaa < 2:568362/146‑1 (MQ=1) gCGGTCTGATAAAACAGAATTTGCCTGGCGTCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTaa < 1:561885/149‑1 (MQ=11) gCGGTCTGAAAAAACCTAATTTGCCTGGCGGCCGTAGCGCGTTGGTCTCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTaa < 1:561931/149‑1 (MQ=11) | GGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAA > CP009273/225083‑225370 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |