| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3417182 = | NA (NA) | 12 (0.170) | 7/284 | 9.4 | 14.0% | intergenic (‑36/+57) | rrfD/rrlD | 5S ribosomal RNA of rrnD operon/23S ribosomal RNA of rrnD operon |
| ? | CP009273 | = 3940048 | 77 (1.030) | intergenic (+81/‑12) | rrlC/rrfC | 23S ribosomal RNA of rrnC operon/5S ribosomal RNA of rrnC operon | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGTAAGC > CP009273/3939901‑3940196 | ggCCGGGTGTGTAAGCGCATCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCtgatg < 2:1209473/149‑1 (MQ=17) ggcGGGTGTGTAAGCGCAGCGAGGCCTTGGGCGAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCtgatga < 2:1033369/147‑1 (MQ=255) gCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCtgatga > 2:644228/1‑149 (MQ=33) cGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCTGAACGCAGAAGCGGTCTGATGaaa < 1:914106/149‑1 (MQ=21) cGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGaaa > 2:1021182/1‑149 (MQ=34) gtgtAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGaa < 1:329531/149‑1 (MQ=35) gtAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGGACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAAtt < 2:1048156/149‑1 (MQ=25) tAAGCGCAGCGATGCGTTGAGCTAACCGGTACTTGTGATCCTGGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAAttt > 1:1216768/1‑149 (MQ=11) tAAGCGCAGCGATACGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAAttt > 2:1065586/1‑149 (MQ=21) aGCGATGCGGTGAGCGAACGAGTACGAATGAACCGGGGGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATAAAGGTTCCATACGGGCACAGTACCGGTCTGATGAAACAGCATTTGCCTggc > 2:256979/1‑149 (MQ=11) gATGCCTTGACCTAACCGGTACTAATGAAACGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTggcggc < 1:331335/149‑1 (MQ=255) cGTTGAGCTAACCGGTACTAATGAACCGAGGAACTGAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCCGGCGGCCGTa > 2:268851/1‑149 (MQ=11) gCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCgg < 1:414253/149‑1 (MQ=35) cTAACCGGTACTAATGATACGTGAGGCTTAACCTTACATCGCTGTAGATGTTTTAGCGGATGAGAGAAGATTTTCAGCCTTATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCggt < 1:288090/149‑1 (MQ=11) tAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCggtg > 1:60142/1‑149 (MQ=35) aaccccgTACTAATGAACCGTGAGGCTTAACCTTAAAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCACAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCggtg < 2:6183/143‑1 (MQ=255) aCCGGTACTAATGATCTGGGAGGCTTAACCTTACAGCGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCggtggt < 2:336219/149‑1 (MQ=255) aCCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGACACAGAATTTGCCTGGCGGCGGGAGCGCggcggt > 2:300089/1‑149 (MQ=255) gTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCa > 2:142881/1‑149 (MQ=34) gTACGAATGAAGCGTGAGGCTTAACCTTACAACGGCGAAGATGTTTTGGCGGATTAGTGAAGATTTTTAGCCTGATATGGATTAAATCAGAACCTAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCa < 1:13655/149‑1 (MQ=11) tACTAATGCACGGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGAAGCGAGAAGTTTTTCAGCCTGATACAGATCAACTCAGACCGCAGAAGCGGTTTGATGAAACCGTATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCAc < 2:344524/149‑1 (MQ=11) tACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGACTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCAc > 1:369366/1‑149 (MQ=21) tACGAATGAACCGTGAGGCTTAACCTTACAAGGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACGGATTAAATCAGAACGCAGAAGCGGTCTGATGCAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCAc < 2:1115694/149‑1 (MQ=255) cTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTAATGAAACAGAATTTACCTGACGGCCGAAGCGCGATGGTCCCACCt > 1:522382/1‑149 (MQ=11) aaTGAACCGTGAGGCTTAACCTTACAACGCCGAAGTTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGa < 1:32033/149‑1 (MQ=17) attaaCCGTGAGGCTTACCCTCACTACTCCTAATATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGAc < 1:333372/146‑1 (MQ=11) tGAACCGTGATGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGAcc < 1:1094430/149‑1 (MQ=21) ctaaCCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGAcc < 1:399569/147‑1 (MQ=21) gAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGAccc < 1:218588/149‑1 (MQ=35) aaCCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGAcccc > 2:269640/1‑149 (MQ=35) gTGAGGCTTAACGTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGAGGTCGTTAGCGCGGTGGTCCCACCTGACCCCATGc < 2:1185743/149‑1 (MQ=11) tGAGGCTTAACCTTACAACGCCGAACATCTTTAGGCAGCTGCGCAAAGACATTCAGCCACATAGAGACGGAATCAGAACCCGGATGCGGTCGGGTGAAACACAATGTTCGTGGTTGCCGTAGCGCGGTGGTCCCACCTGACCCCATGcc < 2:597173/149‑1 (MQ=2) gggctAAGCTTAGAACGACGAAGATGTTTCGGCTGATGTGGTACGATGTTCCGCCTGATACAGATTAGATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTCCCTCGCGGCCGTAGGGCGGTGGTCCTTCCTGACCCCATGCCGat < 2:635902/145‑2 (MQ=11) gCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGGGAAGATTTCCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGGCGGATGAAACAGAATGTGCCTGGCAGCCGTAGCGCGGTGGGCCCACCTGACCCCAGGCCGacc > 2:686927/1‑147 (MQ=11) gCTTAACCTTACAACGCCGAAGATATTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAAc > 1:913903/1‑149 (MQ=25) ccTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTTATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGaa < 2:58474/149‑1 (MQ=25) ccTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTGGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGaa < 1:478145/149‑1 (MQ=21) aCAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCGGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGa < 2:697555/149‑1 (MQ=21) cAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGaa < 1:1004139/149‑1 (MQ=35) aaCGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGaaa < 2:1203621/149‑1 (MQ=35) gCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGc > 2:301825/1‑149 (MQ=35) aaGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTa < 1:107652/149‑1 (MQ=34) aTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAgcg > 2:941578/1‑149 (MQ=33) gTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAGTTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAATTCAGAAGTGAAACGCCGTAGCGcc < 1:917743/149‑1 (MQ=17) ggCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGACCTCAGAAGTTAAACGCCGTAGCGCCGATgg < 2:10773/149‑1 (MQ=17) gCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGt > 1:719170/1‑149 (MQ=32) cgtaTGAGAGAAGATTTTCAGTCTGATACAGATTAAATCAGAACGAAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTa < 2:60142/146‑1 (MQ=12) ggATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAg > 2:1129732/1‑149 (MQ=32) gagagaAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGtgtg < 2:476691/149‑1 (MQ=32) gagaAGATTTCCAGCCTGATACAGATTAAATCAGAGCGCAGAAGCCGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAACGAAACGCCGTAGCGACGACGCTAgttttta < 2:517708/149‑6 (MQ=11) agaagaTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTgggg > 2:274081/1‑149 (MQ=32) agaagaTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTgggg > 1:816009/1‑149 (MQ=32) gaagaTTTTCAGCCTGATACAGATTAAGTCAGAACGCAGAAGCGGTCTGATGAAACAGACTTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGACGAGGGTAATTTGGGGt > 1:532655/1‑149 (MQ=11) aagaTTTTCAGCCTGATTCAGATTAAAGCAGAACGCAGAAGCGGTCTGCTGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATCGTAGTGTGGGGtc < 2:751703/149‑1 (MQ=255) tttttCATCCTGATACAGATTAAATCAGAACTCAGAAGCTGTCTGATGAAACAGAATTTTCCTGGCGGACGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTcc < 1:517974/148‑1 (MQ=11) aTTTTCAGCCTGATACAGATCAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTcc < 2:344197/149‑1 (MQ=17) atCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGCATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCTCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCa < 1:89242/148‑1 (MQ=17) cTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGCCTCACCATGcaga > 1:1219988/1‑146 (MQ=12) tGATTCAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCgaga < 2:1015952/149‑1 (MQ=17) tGAAACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGCCCCACCTGACCTCTTGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCgaga < 2:1053196/149‑1 (MQ=255) gATACAGTTTATATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGagag < 1:464712/149‑1 (MQ=17) cggATTAAATCAGACCGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAgg < 2:943692/147‑1 (MQ=17) aTTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCTGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAATGTGGGGTCTCCCCATGCGAGAGTAGGGaa < 1:644228/149‑1 (MQ=17) tAAATCAGAACGCAGAAGCGGTTTGATGATACAGAATTTGCCTGTCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACt < 1:764055/149‑1 (MQ=12) aTCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGGGAAACGCCGTAGCGCCGACGGTAGTATGGGGTCCACCCATCCGAGCGCAGGGCACTGcc > 2:1033892/1‑149 (MQ=11) tCAGAACGCAGAAGCGGTCTGATGAAATAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGTCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCa < 1:702585/149‑1 (MQ=17) cagaaccacggaGCGGTCTGCTGAAACAGCAGTTGCCTGGCGGCCGTAGCGCGGTGGTCCAACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGAAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAg < 2:71042/138‑1 (MQ=11) gAACGCAGAAGCGGTCTGATGAAACCGAATTTGCCTGGCGGCCGGCGCGCGGAGGTCCCACCTGACCACCTGCCCAACGCTGAAGTGAAAGGTCGTCGCGCCGCCGGAAGGGTGGGGTCTCCCCACGCGAGAGTTGGGAGCTGCCAGGc > 2:378817/1‑149 (MQ=11) aGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCaaa < 1:485611/149‑1 (MQ=32) aGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCaaa > 1:1056862/1‑149 (MQ=32) aaGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCaaact > 2:476145/1‑147 (MQ=17) aaGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAAtt < 1:142881/149‑1 (MQ=32) aaGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCAGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAAtt > 1:18074/1‑149 (MQ=17) tCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGTGTCTCCCCATGAGAGAGAAGAAAACTGACAAGCATCAAATTaagaag > 1:147094/1‑149 (MQ=11) tCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGGAGGGAACTGCCAGGCATCAAATTAAGCAg > 2:461894/1‑149 (MQ=17) atgaAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGAGTGGGGTCTCGACATGATGGAGGAGGGAACTGCCAGGCATCAAATTAAGCAGTAAg > 2:866692/1‑149 (MQ=11) tgaAACATAATGTGCCTGGGGGTCGTAGCGGGGTGGTCCCACCTGGACCACTGCCGAACTCATAAGTGAAACGTCGTAGCGACGATGGTACTGTGGGGTCTCCCCATGTGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGTAAGc < 2:428521/149‑1 (MQ=11) | GGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGATGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGTAAGC > CP009273/3939901‑3940196 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |