New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 350323	59 (0.790)	6 (0.080)	6/282	9.9	9.4%	noncoding (14/171 nt)	REP26 (repetitive extragenic palindromic) element; contains 4 REP sequences	REP26 (repetitive extragenic palindromic) element; contains 4 REP sequences
	?	CP009273	= 350357	59 (0.830)					noncoding (48/171 nt)	REP26 (repetitive extragenic palindromic) element; contains 4 REP sequences	REP26 (repetitive extragenic palindromic) element; contains 4 REP sequences
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CCAGGCGATTTGCGAAGGACGCGATCCTGGAGATCTGACGACCATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATT  >  CP009273/350210‑350503                                                                                                                                                    |                                                                                                                                                   ccAGGCGATGTGCGAAGGACGCGATCCTGGAGATCTGACGACCATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATg                                                                                                                                                   <  2:665668/149‑1 (MQ=255)  cAGGCGATTTGCGAAGGACGCGATCCTGGAGATCTGACGACCATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAATAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGc                                                                                                                                                  >  1:320051/1‑149 (MQ=255)            gCGAAGGACGCGATCCTGGAGATCTGACGACCATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGAcg                                                                                                                                        >  2:1134323/1‑149 (MQ=255)             cGAAGGACGCGATCCTGGAGATCTGACGACCATTGATGATCCTGCGTCGTTGGATCCGATCCGCCAGGCGATGTAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCGGAcgc                                                                                                                                       >  2:205743/1‑149 (MQ=255)             cGAAGGACGCGATCCTGGAGATCTGACGACCATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGAcgc                                                                                                                                       >  1:1001762/1‑149 (MQ=255)             cGAAGGACGCGATCCTGGAGATCTGACGACCATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGAAGCGACGCGCGGTGCATCCGGCACAGTGTGCCGATGCCTGATGCGACGCTGAcgc                                                                                                                                       >  1:341780/1‑149 (MQ=255)                  gACGCGATCCTGGAGATCTGACGACCATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGCAGCGTAGGTTATTGTCGGATGCGTATCGCGTTTCATCCGGCACTTTGTGCCGATGCCTGATGCGACGCTGACGCGtttt                                                                                                                                  >  1:472935/1‑149 (MQ=255)                    cgcgATCCTGGAGATCTGACGACCATTGATGTTCCTGTGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTAt                                                                                                                                <  1:206809/149‑1 (MQ=255)                        aTCCTGGAGATCTGACGACCATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATAATg                                                                                                                            >  2:340663/1‑149 (MQ=255)                                        gacCATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCGTCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGGCCTGAAcc                                                                                                            >  1:885090/1‑149 (MQ=255)                                          ccATTGATGCTCCTGCGTCGTTGGATCAGATCCGCCAGGCGGTGGAAGAGTAGGGTATTGTCGGATGGGTCGCGCGGTGCAGCCGGCACTGTGTGCCGGTGCCTGATGCGACGCGGACGCGTTTTATCATGCCTACCGACCTGAACCgg                                                                                                          >  2:228514/1‑148 (MQ=255)                                          ccATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTTTCGGATGCGTCGCGCGGTGCATCAGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGt                                                                                                          <  1:224497/149‑1 (MQ=255)                                           ccttGATGTCCCTGCGTCGTTGGATTAGATGCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGAGGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTa                                                                                                         <  1:172355/147‑1 (MQ=255)                                           cATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCATACGGAACTGAACCGTa                                                                                                         >  1:867017/1‑149 (MQ=255)                                           cATTGATGATCCTGCGTCGTTGGAGCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTa                                                                                                         >  2:1190420/1‑149 (MQ=255)                                            aTTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAg                                                                                                        >  2:359298/1‑149 (MQ=255)                                            aTTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGCGCCGATGCCTGATGCGACGCTGCCGCGTTTTATCATGCCTACGGCCCTGCACCGtgg                                                                                                        >  2:62014/1‑147 (MQ=255)                                            aTTGAGGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGtcg                                                                                                        <  2:215334/149‑3 (MQ=255)                                                atgatCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCg                                                                                                    >  1:1181297/1‑149 (MQ=255)                                                  gatCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGGTGCGTCGGGCGGTACATGCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTGGGTGGGa                                                                                                  >  2:281946/1‑149 (MQ=39)                                                   atCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGTGTCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGAt                                                                                                 <  1:544802/149‑1 (MQ=255)                                                      cTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAg                                                                                              <  2:603715/149‑1 (MQ=255)                                                       tGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAgg                                                                                             >  2:1055559/1‑149 (MQ=255)                                                              ttGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGCCACTGACGCGTTTTATCATGCCTACGCACCTGAACCGTAGGTCGGATAAGGCGCTcgc                                                                                      >  2:159592/1‑149 (MQ=255)                                                                    cAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCa                                                                                <  1:359298/149‑1 (MQ=255)                                                                      gATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATc                                                                              >  1:1220380/1‑149 (MQ=255)                                                                          cGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCTGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGTATAAGGCGCTCGCGTCGCATCCGac                                                                          <  1:615366/149‑1 (MQ=255)                                                                           gCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGaca                                                                         >  1:1134099/1‑149 (MQ=255)                                                                              aGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCa                                                                      <  1:690026/149‑1 (MQ=255)                                                                              aGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCa                                                                      <  2:1198689/149‑1 (MQ=255)                                                                                    tGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCa                                                                <  2:341780/149‑1 (MQ=255)                                                                                         gagTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGc                                                           <  1:1198167/149‑1 (MQ=255)                                                                                         gagTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGc                                                           <  1:236194/149‑1 (MQ=255)                                                                                           ttatgTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCt                                                         <  2:916432/145‑1 (MQ=255)                                                                                           gTAGTTTATTGTCGGAGGCGTCGCGCGTTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCt                                                         <  2:214998/149‑1 (MQ=255)                                                                                               gTTATTGTCGGATGCGTCGCGCGGTGCATGCGGCACTGTGTGCCGTTGTCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATg                                                     <  1:421882/149‑1 (MQ=255)                                                                                                ttATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGc                                                    >  2:276678/1‑149 (MQ=255)                                                                                                  aTTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGAAAAAGCGCTCGCGTCGCATCCGACACCCTGATCAAATGCCTGATGCgg                                                  >  1:256081/1‑148 (MQ=39)                                                                                                     gTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCCCAGATGCCTGATGCGACGc                                               >  2:612566/1‑149 (MQ=255)                                                                                                      tCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGcc                                              >  2:1016635/1‑148 (MQ=255)                                                                                                        ggATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGa                                            <  2:317452/149‑1 (MQ=255)                                                                                                         ggtGCGGCGCGCGGTCCATCCGGCACTGTGTGCCGAGGCCTGATGCGACGCTGACGCGTGTTATCCTGCCTACGGACCGGATCCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGAc                                           <  2:713472/147‑1 (MQ=38)                                                                                                           tGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTgcggc                                         >  1:927211/1‑145 (MQ=255)                                                                                                            gCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGAcgcg                                        >  2:90512/1‑149 (MQ=255)                                                                                                              gTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTc                                      <  1:1055559/149‑1 (MQ=255)                                                                                                                 gcgcgGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTa                                   >  2:639231/1‑149 (MQ=255)                                                                                                                   gcgGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGcgtcagcgtcgcatc                                 <  1:1190420/149‑15 (MQ=255)                                                                                                                         gcatcggcacacagtgCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCGCAGATGCCTGATGCGACGCGGACGCGCCTTATCAGGCCt                           >  2:732362/14‑149 (MQ=38)                                                                                                                          catcggcacacagtgCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTa                          >  1:805372/13‑149 (MQ=255)                                                                                                                          aTCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTa                          >  1:1011269/1‑149 (MQ=255)                                                                                                                             cGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTAccc                       >  2:701258/1‑149 (MQ=255)                                                                                                                               gCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACATGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCCTGCTCAGATGCCTGATGCGAGGCTGACGGGTTTTATCAGGGCTACCCAc                     >  2:45116/1‑149 (MQ=38)                                                                                                                                  cTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGCCACCATGCTCAGATGCCTGATGCGGCGCTGACGCGTCTTATCACGCCTACCACCTGt                  >  2:1002938/1‑149 (MQ=39)                                                                                                                                   tgtgtgCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGCCTTATCAGGCCTACCCAcgttt                 >  1:491649/1‑145 (MQ=255)                                                                                                                                      gtgCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGttttt              <  1:1062511/149‑1 (MQ=255)                                                                                                                                          cGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTacac          <  2:1001762/149‑1 (MQ=255)                                                                                                                                          cGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTacac          <  2:171325/149‑1 (MQ=255)                                                                                                                                          cGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTacaa          <  2:824159/149‑2 (MQ=255)                                                                                                                                                 tGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCGCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCCACCCACTGTTTTTACACCGATAAt   >  2:619813/1‑149 (MQ=255)                                                                                                                                                  gATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAAtt  >  1:232514/1‑149 (MQ=255)                                                                                                                                                  gATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGAGAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAAtt  >  2:177032/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                   CCAGGCGATTTGCGAAGGACGCGATCCTGGAGATCTGACGACCATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAGGTTATTGTCGGATGCGTCGCGCGGTGCATCCGGCACTGTGTGCCGATGCCTGATGCGACGCTGACGCGTTTTATCATGCCTACGGACCTGAACCGTAGGTCGGATAAGGCGCTCGCGTCGCATCCGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATT  >  CP009273/350210‑350503

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.