| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009273 | 3,371,135 | G→T | intergenic (‑356/+39) | sspA ← / ← rpsI | stringent starvation protein A, phage P1 late gene activator, RNAP‑associated acid‑resistance protein, inactive glutathione S‑transferase homolog/30S ribosomal subunit protein S9 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,371,135 | 0 | G | T | 96.9% | 169.1 / NA | 65 | intergenic (‑356/+39) | sspA/rpsI | stringent starvation protein A, phage P1 late gene activator, RNAP‑associated acid‑resistance protein, inactive glutathione S‑transferase homolog/30S ribosomal subunit protein S9 |
| Reads supporting (aligned to +/- strand): ref base G (1/0); major base T (33/29); minor base A (2/0); total (36/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.97e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TGCGCTTTAGTCTGAAATAGTTGACTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGTTCA > CP009273/3370991‑3371279 | tGCGCTTTAGTCTGAAATAGTTGACTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGGCTGTCAGGCGGCAACAAAAAGCAACTTTCCAGTTTTTACGCCGAATCAGACTTTAGCTATAAAAACACCCGCCGAAGCGGAtttt > 2:469826/1‑149 (MQ=255) gcgcTTTAGTCTGAAATAGTTGACTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGtttttt > 1:418382/1‑149 (MQ=255) tCTTAAATAGTTGACTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAAtt < 2:895703/149‑1 (MQ=255) tCTGAACTAGTTGACTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCTAAAAGCAACTTTCCAGTTTTTACTCTTATTCAGATTTTAGCTATAAAAAAACCCGCCGAATCGGTTATTTTAGAAAAtt > 1:509133/1‑149 (MQ=255) aaaTAGTTGACTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGttt > 1:1154551/1‑149 (MQ=255) cTTAGTCCCTTATTCGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCAGATTCTGATTTTATCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAg < 1:750734/149‑1 (MQ=255) aGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAg > 1:10904/1‑149 (MQ=255) ccTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAAACCGCCGAAGCGGATTTTTTCAAAAATTGTTTTCTGCCGGAGCAGAAGc > 1:435800/1‑149 (MQ=255) tATTGGCTATGTGGTTTTTGTTTTACCTGTCTGTCTGTTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCaa < 1:554837/149‑1 (MQ=255) aTGTGTTTTTTGTTTTACCTGTCTGTCAGGTGGAAGCAAAAAGGAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGTTATAAAAAAACCCGCCGAAGCAGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGtt < 1:464626/149‑1 (MQ=255) aTGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGtt < 2:418382/149‑1 (MQ=255) ggTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGACAATTAACGTTTGga > 1:464750/1‑149 (MQ=255) ggTTTTTGTTTTACCTGTCGGTCAGGTGGCAGCAAACAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGga < 2:1073280/149‑1 (MQ=255) gTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGgag > 1:994379/1‑149 (MQ=255) gTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACCCTGATTCAGATGTTAGCTATAAAAAAACACGCCAAAGCGATTTTATTCGAAATTTGTTTAGTACCGGGGCAGAAGACAATTAACGttgagag > 1:4581/1‑144 (MQ=255) ttttGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGaa > 1:587373/1‑149 (MQ=255) ttGTTTTTCCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACt < 1:294788/149‑1 (MQ=255) ttGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACt > 1:398247/1‑149 (MQ=255) tttttACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACTCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGc < 1:1019529/148‑1 (MQ=255) gTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAATTTTACTGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGTTGTGTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGc < 1:1024593/149‑1 (MQ=255) ctgtctgtCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTCTAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGGGAACGGCGaacgac > 2:69082/1‑149 (MQ=255) ctgtctgtCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGgacgac > 2:1079978/1‑149 (MQ=255) gtctgttAGGTGGGAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGgacgacga < 2:465280/149‑1 (MQ=255) gtctgtcAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGgacgacga > 1:1101145/1‑149 (MQ=255) gtctgtcAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAAAGTTTGGAGAACTGCGaacggcga > 2:838373/1‑149 (MQ=255) tctgtcAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGATGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGgacgacgac < 1:506334/149‑1 (MQ=255) tgtcAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTTGATTTTTTTTTTCTGCCGGAGCCACAGCCAATTAACGTTTGGAGAACTGCGgccgcggcggg > 2:187576/1‑142 (MQ=255) tcAGGTGGCAGCAAAAAGCGACTTTCCAGTTTTTACGCTGATTCGGATTTTAGCTATAAAAAACCTCGCGGCGGCGGTTTTTTTCGAACATTGTTTTGTGCCGGAGCAGAAGCCAGTTTACGTTTGGTGACCTGTGGAGGAGGGCGTgg > 2:161926/1‑148 (MQ=255) tcAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTATGACGGAGCAGAAGCCAATTAACATTTGCAGAACTGCGGACAACGACGTGc > 1:415850/1‑149 (MQ=255) gTGGCAGCAAAAAGCAACTTTCCAGATTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTCTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATAAACGTTAGGAGAACAGCGGACGACGACGTGCttaa > 2:117571/1‑147 (MQ=255) gcagcaAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTAAGc > 1:220861/1‑149 (MQ=255) gcagcaAAAAGCAACTTTCCAGTATTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGGGCTTTACGc > 1:685258/1‑149 (MQ=255) agcaAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAg > 1:1010283/1‑149 (MQ=255) agcaAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAg > 1:809356/1‑149 (MQ=255) gcaAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGa > 1:1107625/1‑149 (MQ=255) taaaaaGCAATTTTCCAGTTTTTATGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGAc < 1:787382/148‑1 (MQ=255) caAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGAc < 1:983833/149‑1 (MQ=255) caAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGAc < 1:1019572/149‑1 (MQ=255) caAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTAACGCAGAc > 1:714424/1‑149 (MQ=255) aaaaaGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGAcc > 2:215323/1‑149 (MQ=255) aaCTTTCCAGGTGTTACGCTGATTCAGATATTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTTTTTTCTGCGGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTc < 2:1025407/149‑1 (MQ=255) cAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGtt < 1:978810/149‑1 (MQ=255) cAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCCGTCGGAGACGGGCTTTACGCAGACCGACTTTCTTACGtt < 1:907860/149‑1 (MQ=255) tttgtACTCTGATTCATATTTTGACTATAAAAAACCCCGCCGAAGCTGTTTTTTTCGAAAATTTTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCaa < 2:669603/149‑1 (MQ=255) cTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCTGAAGCAGAAACCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTGTCTTAAGTTCAACCTGACGa > 1:541713/1‑149 (MQ=255) tGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACAACGATCTATACGCAGACCGACTTTCTTACGTTCAACCTGACGAg > 1:1146831/1‑149 (MQ=255) tGATGCAGATTTTAGCTATAAAAAACCCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAg < 2:509305/149‑1 (MQ=255) gagtCAGATTTTAGCTAAAAAAAAACCCGGCGAAGCGGTGTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGc < 1:212929/146‑1 (MQ=255) tCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGGGTc > 1:1074380/1‑149 (MQ=255) tCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTc > 1:822791/1‑149 (MQ=255) cAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCa < 2:464750/149‑1 (MQ=255) aGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCAc < 2:10904/149‑1 (MQ=255) aGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCAc < 1:215323/149‑1 (MQ=255) aGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGAAGACGAAAAATAACGTTTGGAGAAATGCGGACGACGACAGGCTTTACGCAGAGCGGCTTTGTTACGGTAAACCGGACGAGCGTcgc > 2:242384/1‑147 (MQ=255) aGATTTTAGCTAGAAAAGAACCCGCTTGAGCGTTTTTTTTCGAAAATTGTTTTCGGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCAc > 2:724028/1‑149 (MQ=255) ttttAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAg < 2:1154551/149‑1 (MQ=255) tataAAACAATACGCCGATGTGGTTTATTTCGAAAATTTTTTGCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGaa < 2:1157716/149‑1 (MQ=255) tataAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGaa > 1:1139060/1‑149 (MQ=255) aaaaaCCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTATGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGCGTAACGAAGCCAg > 2:887428/1‑149 (MQ=255) aaaccgcttcggCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTCTCGCGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCGGACGAGCGTCACGAGTAACGAAGCCGGCtt > 2:506028/12‑149 (MQ=255) ccgccgAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGAGTCACGAGTAAAGAAACCACCTTTAc > 1:262306/1‑149 (MQ=255) ccgccgAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACAAGCGTCACGAGTAACGAAGCCAGCTTTAc > 1:104546/1‑149 (MQ=255) cgccgAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACg < 2:587373/149‑1 (MQ=255) gccgAAGGGGTTGTTTTCGAAAATGGGTTTCTGGCGGAGCAGAAGCCAATTAACGTTGGGAGAACTGCGGACGACGATGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGc < 1:30204/149‑1 (MQ=255) gAAGGGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACTTTTGGAGAACTGCGGACGACGACGTGCTTTACCCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAATCCAGCTTTACGCAGt < 2:777819/149‑1 (MQ=255) gCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCTGCTTTACGCAGTTCa < 2:685258/149‑1 (MQ=255) | TGCGCTTTAGTCTGAAATAGTTGACTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGTTCA > CP009273/3370991‑3371279 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |