New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	1942820 =	55 (0.900)	3 (0.050)	3/278	9.4	5.5%	coding (70/453 nt)	nudB	dihydroneopterin triphosphate pyrophosphatase
	?	CP009273	1942866 =	52 (0.900)					coding (24/453 nt)	nudB	dihydroneopterin triphosphate pyrophosphatase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTAAGGTCAGTTGTTCAGCGACAACATCAATGGTGACCTCTTCCTTTACTTCGCGCATGGCAGCTTGCGGCGCGGTTTCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATCCCATTCACATAGTTATCTATGCTCATGGGAGTTCACTCAGTTGC  >  CP009273/1942673‑1942964                                                                                                                                                    |                                                                                                                                                 ttAAGGTCAGTTGTTCAGCGACAACATCAATGGTGACCTCTTCCTTTACTTCGCGCATGGCAGCTTGCGGCGCGGTTTCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGCCACGCCGCTGCACCACCAGCAcc                                                                                                                                                 >  2:123523/1‑149 (MQ=255)          gttgttCAGCGACAACATCAATGGTGACCTCTTCCTTTACTTCGCGCATGGCAGCTTGCGGCGCGGTTTCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTa                                                                                                                                        <  1:131538/149‑1 (MQ=255)              ttCAGCGACAACATCAATGGTGACCTCTTCCTTTACTTCGCGCATGGCAGCTTGCTGCGCGGTTTCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCtt                                                                                                                                    <  1:257030/149‑1 (MQ=255)                  gctacaataTCAATGGTGACCTCTTCCTTTACTTCGCGCATGGCAGCTTGCGGCGCGGTTTCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGc                                                                                                                                <  1:209954/146‑1 (MQ=255)                    gACACCATCAATGGTGCCCTCTTCCTTTACTTCGCGCATGGCAGCTTGCGGCGCGGTTTCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCAGGATCGGCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGt                                                                                                                              <  2:653460/149‑1 (MQ=255)                          accAATGGTGACCGCTTCCTTTCCTTCGCGCATGGCAGCTTGCGGCGCGGTTTCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGAGCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGa                                                                                                                        <  1:220900/147‑1 (MQ=255)                          aTCAATGGTGACCTCTTCCTTTACTTCGCGCATGGCAGCTTTCGGCGCGGTTTCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGCAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTAACTGTTGCGTAGATGa                                                                                                                        >  2:32519/1‑149 (MQ=255)                          aTCAATGGTGACCTCTTCCTTTACTTCGCGCATGGCAGCTTGCGGCGCGGTTTCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGa                                                                                                                        <  1:785075/149‑1 (MQ=255)                          aTCAATGGTGACCTCTTCCTTTACTTCGCGCATGGCAGCTTGCGGCGCGGTTTCAACCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCGGCAACATCAGCACCCGTTGCGTATCTTTTGCGTAGATGa                                                                                                                        >  2:985104/1‑149 (MQ=255)                             aaTGGTGACCTCTTCCTTTACTTCGCGCATGGCAGCTTGCGGCGCGGTTTCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCa                                                                                                                     <  1:48435/149‑1 (MQ=255)                              aTGGTGACCTCTTCCTTTACTTCGCGCATGGCAGCTTGCGGCGCGGTTTCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCAc                                                                                                                    >  2:393707/1‑149 (MQ=255)                                 gTGACCTCTTCCTTTCCTTCTCGCATGCCAGCTTGCGGCTCGGTTTCACCCTCTCCCACTCGGCTGGTTCCCGACTGCCAGTAATCGGCTGCGTCACGCCGCTGCAACATCAGCATGCGTTTCGCATCTTGCGCGTAGATGACCACTaa                                                                                                                 <  2:181592/149‑1 (MQ=255)                                     ccTCTTCCTTTACTTCGCGCATGGCAGCTTGCGGCGCGGTTTCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATc                                                                                                             <  1:719047/149‑1 (MQ=255)                                      ctctTCCTTTACTTCGCGCATGGCAGCTTGCGGCGCGGTTTCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCg                                                                                                            >  1:103175/1‑149 (MQ=255)                                       tctTCCTTTACTTCGCGCATGGCAGCTTGCGGCGCGGTTTCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCCGCCCCCGTTTCGTATCCTGTGCGTAGACGACCCCCAAGacgga                                                                                                           >  2:689264/1‑145 (MQ=255)                                        tttCCTTTACTTCGCGCATGGCAGCTTGCGGCGCGGTTTCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACTAGCCTCTTATCTTGTGCGTAGATGACCACTAAGATCGaa                                                                                                          <  1:242799/148‑1 (MQ=255)                                         ttCCTTTACTTCGCGCATGGCAGCTTGCGGCGCGGTTTCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGaaa                                                                                                         >  2:730081/1‑149 (MQ=255)                                            cTTTACTTCGCGCATGGCAGCTTGCGGCGCGGTTTCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACgg                                                                                                      <  1:839215/149‑1 (MQ=255)                                             tttACTTCGCGCATGGCAGCTTGCGGCGCGGTTTCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACggg                                                                                                     >  1:816583/1‑149 (MQ=255)                                             tttACTTCGCGCATGGCAGCTTGCGGCGCGGTTTCACCCTCTTCAACGCTTCGGGTTACAGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAATTTCGAAACggg                                                                                                     >  1:985304/1‑149 (MQ=255)                                                ccgtCGGGCATGGCGGCTTGCGGCGCGGTTTCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACg                                                                                                  <  1:111722/146‑1 (MQ=255)                                                aCTTCGCGCATGGCAGCTTGCGGCGCGGTTTCCCCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCATATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACg                                                                                                  <  1:360504/149‑1 (MQ=255)                                                 cTTCGCGCATGGCAGCTTGCGGCGCGGTTTCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGAGCGTCAGGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGc                                                                                                 >  2:103147/1‑149 (MQ=255)                                                 cTTCGCGCATGGCAGCTTGCGGCGCGGGTTCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGc                                                                                                 >  2:838093/1‑149 (MQ=255)                                                  ttCGCGCATGGCAGCTTGCGGCGCGGTTTCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCt                                                                                                <  2:191615/149‑1 (MQ=255)                                                     gcgcATGGCATCTTGCGGCGCGGTTTCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTtat                                                                                             >  2:590947/1‑149 (MQ=255)                                                      cgcATGGCAGCTTGCGGCGCGGTTTCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTtata                                                                                            <  1:279242/149‑1 (MQ=255)                                                         aTGGCAGCTTGCGGCGCGGTTTCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATacac                                                                                         <  2:289933/149‑1 (MQ=255)                                                         aTGGCAGCTTGCGGCGCGGTTTCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATacac                                                                                         <  1:402018/149‑1 (MQ=255)                                                          tGGCAGCTTGCGGCGCGGTTTCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATCCACt                                                                                        >  1:607141/1‑149 (MQ=255)                                                                     ttcactttttCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCAc                                                                             >  2:869087/8‑149 (MQ=255)                                                                        gcgGTTTCACCCTCTTCCACGCTGCCGGCTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGTGACGCTTATACACTTTATCCTTCACGCt                                                                          <  1:537343/149‑1 (MQ=255)                                                                                ccccTCTTCCACGCTGCCGGTTACCGACTGACAGCAATCGGGATCGCCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAACCGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTc                                                                  <  2:798901/148‑1 (MQ=255)                                                                                aCCCTCTTCCACGCTGCCGATTACCGACTGCCAGAAATAGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGTGTTCCACGAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTc                                                                  >  1:729267/1‑149 (MQ=255)                                                                                  ccTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGt                                                                <  2:643120/149‑1 (MQ=255)                                                                                     ctTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGa                                                             <  2:918935/149‑1 (MQ=255)                                                                                      ttCCACGCTGCCGGGTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTGTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGAc                                                            <  2:759808/149‑1 (MQ=255)                                                                                              tGCCGGCTACCGACGGCCAGAAATCGTGAGCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCg                                                    <  2:700084/149‑1 (MQ=255)                                                                                               gCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGc                                                   <  1:532860/149‑1 (MQ=255)                                                                                                  ggTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCa                                                >  2:819228/1‑149 (MQ=255)                                                                                                   gTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCAt                                               <  2:926812/149‑1 (MQ=255)                                                                                                    ttACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATc                                              <  1:624728/149‑1 (MQ=255)                                                                                                    ttACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACAAATTATCCTCCTCGCTGTCACTACGTTGACTGCCTTCGCTCATc                                              <  2:988621/149‑1 (MQ=255)                                                                                                         gACTGCCAGAAATCGGGATCATCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATCCCAtt                                         <  1:857481/149‑1 (MQ=255)                                                                                                           cggCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATCCCATTca                                       <  1:22965/147‑1 (MQ=255)                                                                                                                aGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGTCTCTTCGTTGACTGCCTTCGCTCATCCCATTCACATAg                                  >  1:19357/1‑149 (MQ=255)                                                                                                                aGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATCCCATTCCCATAg                                  >  2:939333/1‑149 (MQ=255)                                                                                                                   aaTCGGGATCGTCACGCCGCTGCAACATCCGCACCCGTTTCGTATCGTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATTCTTCACGCTGCCTCTTCGTTGACTGACTTCGCTCATCCCATTCCCATAGttc                               >  2:944035/1‑148 (MQ=255)                                                                                                                      cGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATCCCATTCACATAGTTATCt                            <  2:699573/149‑1 (MQ=255)                                                                                                                                aCGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATCCCATTCACATAGTTGTCTATGCTCATgg                  >  2:72879/1‑149 (MQ=255)                                                                                                                                  gccgcTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATCCCATTCACATAGTTATCTATGCCCATGGGa                >  1:111431/1‑149 (MQ=255)                                                                                                                                        gCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATCCCATTCACATAGTTATCTATGTCCATGGGAGTTCAc          >  2:233924/1‑149 (MQ=255)                                                                                                                                        gCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATCCCATTCACATAGTTATCTATGCTCATGGGAGGTCAc          >  2:794766/1‑149 (MQ=255)                                                                                                                                               cAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATCCCATTCACATAGTTATCTATGCTCATGGGAGTTCACTCAGTTg   >  1:896141/1‑149 (MQ=255)                                                                                                                                                aGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATCCCATTCACATTGTTATCTATGCTCATGGGAGGTCACTCAGTTgc  >  2:772757/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                 TTAAGGTCAGTTGTTCAGCGACAACATCAATGGTGACCTCTTCCTTTACTTCGCGCATGGCAGCTTGCGGCGCGGTTTCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATCCCATTCACATAGTTATCTATGCTCATGGGAGTTCACTCAGTTGC  >  CP009273/1942673‑1942964

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.