Predicted mutation
evidence seq id position mutation annotation gene description
JC JC CP009273 3,178,254 IS5 (+) +4 bp coding (56‑59/291 nt) yqiC → BMFP family putative fusogenic protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 2282398 =NA (NA)45 (0.830) 37/290 0.5 100% noncoding (1195/1195 nt) IS5 repeat region
?CP009273 3178254 = 0 (0.000)coding (56/291 nt) yqiC BMFP family putative fusogenic protein
* ? CP009273 = 2283592NA (NA)65 (1.190) 51/292 0.1 100% noncoding (1/1195 nt) IS5 repeat region
?CP009273 = 3178257 0 (0.000)coding (59/291 nt) yqiC BMFP family putative fusogenic protein

Only 100 of 111 total aligned reads displayed.

AGCAACGCATAGCTTCACATAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCT  >  CP009273/3178108‑3178401
                                                                                                                                                  |                                                                                                                                                   
agcaACGCATAGCTTCACATAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTa                                                                                                                                                   <  1:432516/149‑1 (MQ=255)
  cAACGCATAGCTTCACATAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAg                                                                                                                                                 <  1:746624‑M2/149‑2 (MQ=255)
   aaCGCATAGCTTCACATAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCGAAgg                                                                                                                                                <  1:3323‑M2/149‑3 (MQ=255)
     ggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgacggtgtgtgccgagaagaatttccccgcttaatcgcaccttccCTAAAGGa                                                                                                                                              >  1:25782‑M2/142‑149 (MQ=255)
         tAGCGTCACATAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCTGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtg                                                                                                                                          >  1:650189‑M2/1‑141 (MQ=255)
          aGCTTCACATAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgc                                                                                                                                         >  1:147870‑M2/1‑140 (MQ=255)
            cTTCACATAATTCTGGTTTATGACTTACCCTTATCGCAATACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCCCGCCAGGTTCACGACTCAAAGCCTCAggaagg                                                                                                                                            <  2:733314‑M2/144‑7 (MQ=255)
             cgccttaaatggcgaagaaacggtctaaataggttgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATc                                                                                                                                           <  2:247252‑M2/11‑1 (MQ=255)
                acgTAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcg                                                                                                                                        >  2:725164‑M2/1‑134 (MQ=255)
                  taaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGa                                                                                                                                      <  2:81283‑M2/16‑1 (MQ=255)
                    aaTTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTCAAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaaca                                                                                                                                    <  2:164976‑M2/144‑15 (MQ=255)
                     aTTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaa                                                                                                                                   >  2:120320‑M2/1‑129 (MQ=255)
                      ttCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccct                                                                                                                             <  1:443363‑M2/149‑22 (MQ=255)
                       tCTGGTTTATGACTTCCCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctg                                                                                                                            >  1:176432‑M2/1‑127 (MQ=255)
                          gaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGaagct                                                                                                                         >  1:258653‑M2/121‑147 (MQ=255)
                            tttATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCCAATCGCCCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtcccag                                                                                                                            <  2:192802‑M2/144‑23 (MQ=255)
                              aaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagagatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTgg                                                                                                                     >  1:618867‑M2/117‑149 (MQ=255)
                               aacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACGGCATCAGGGAGTTCGGGGACGAt                                                                                                                         >  2:301138‑M2/116‑144 (MQ=255)
                                  ggtctacataggctgcttcaaggcatttaagggagaaaacatcggctcaaacatgaagaaatgaaatcactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACGGAATCAGGGAGTTCGGGGAAGATGTGGAGaa                                                                                                                 <  1:365706‑M2/37‑1 (MQ=255)
                                   gtctaaataggctgatttaaggcatttacgggagaaaaaagcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTgg                                                                                                                     <  2:255992‑M2/33‑1 (MQ=255)
                                   gtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGGAGATGTgg                                                                                                                     >  2:326744‑M2/112‑144 (MQ=255)
                                   gtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGaaa                                                                                                                >  1:787597‑M2/112‑149 (MQ=255)
                                    ttACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGGGCAAAGAGCTCGCCAGGATCACGAATCAATGCCTAAggaaggtgcgaaccaggccgtgatatgagatcatg                                                                                                               <  1:78243‑M2/149‑36 (MQ=255)
                                       ccccTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgttt                                                                                                            >  1:140175‑M2/1‑111 (MQ=255)
                                       cccTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgttt                                                                                                            >  1:246793‑M2/1‑111 (MQ=255)
                                       cccTTATCGCACTACAACGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgttt                                                                                                            >  1:738723‑M2/1‑111 (MQ=255)
                                        ccTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcat                                                                                                                <  2:746349‑M2/144‑35 (MQ=255)
                                        aataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGACgatgtggcggaa                                                                                                                >  2:377279‑M2/107‑139 (MQ=255)
                                         cTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatg                                                                                                               <  2:269132‑M2/144‑36 (MQ=255)
                                         atcggctgactcaaggcacttacgggagaaacaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaaggatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATc                                                                                                          <  1:249356‑M2/44‑1 (MQ=255)
                                          ttATCGCACTACAATGGAACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACAAATCAATGCCTAAggagggtgcgaacaagtcccggatatcagaccacgg                                                                                                              <  2:269630‑M2/144‑37 (MQ=255)
                                          taggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgggccagcagagaagaatttccccgcttattcgcaccttccCGAAAGGAATcagggagttcggggaaaaaaaaaaaaaaaa                                                                                                              <  2:509054‑M2/40‑15 (MQ=255)
                                          taggctgatgacaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGaaaaa                                                                                                              <  2:25908‑M2/40‑1 (MQ=255)
                                           ctcacacttacaatgcaCTGAACACCTACCAGGACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgttt                                                                                                            >  2:165874‑M2/9‑106 (MQ=255)
                                            agcgcACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgttt                                                                                                            >  2:66422‑M2/3‑106 (MQ=255)
                                               gCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtc                                                                                                         >  2:663159‑M2/1‑103 (MQ=255)
                                                            aCTCACCACCTATCAGCACATGGAAACGACAACTATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaaca                                                                                       >  1:136098‑M2/1‑90 (MQ=255)
                                                            aCTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatcgggagccataggaca                                                                                       <  1:697908‑M2/149‑60 (MQ=255)
                                                              acgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgctgattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGACGATGTGGAGAAAAAAATCCGCCAAACCCTCCAAg                                                                                          >  2:43728‑M2/85‑144 (MQ=255)
                                                               cAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaa                                                                                         <  2:223009‑M2/144‑58 (MQ=255)
                                                               cAACACCTAGCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgaggtcatgtttggcatctggagccatagaa                                                                                         <  2:223264‑M2/144‑58 (MQ=255)
                                                                gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAgcg                                                                                        <  2:562542‑M2/62‑1 (MQ=255)
                                                                     cgatcAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCGCGCCAGGTTCACGAATCAATGCCGAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatc                                                                              >  1:739168‑M2/3‑81 (MQ=255)
                                                                       aaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgataagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGa                                                                                 <  2:43918‑M2/69‑1 (MQ=255)
                                                                       aaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGa                                                                                 <  2:715868‑M2/69‑1 (MQ=255)
                                                                       aTCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcat                                                                            >  1:226403‑M2/1‑79 (MQ=255)
                                                                       aTCAGTACAGGGAAACTACAAGGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcat                                                                            >  1:226315‑M2/1‑79 (MQ=255)
                                                                          aGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtcccttatatgagatcatgtttgtcatctggagccatagaacagggttcatc                                                                              >  2:232950‑M2/1‑76 (MQ=255)
                                                                            tACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacacgtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtc                                                                       >  1:410752‑M2/1‑74 (MQ=255)
                                                                             ggctcaaacacgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGAc                                                                      <  1:319886‑M2/80‑1 (MQ=255)
                                                                              cAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga                                                                          >  2:287721‑M2/1‑72 (MQ=255)
                                                                               ctcaaacataaagaaatgaaatgactgagtcagccgagaagaatttccccgctgattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTc                                                                         <  2:410961‑M2/77‑1 (MQ=255)
                                                                               aGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatc                                                                    <  1:805914‑M2/149‑79 (MQ=255)
                                                                                 ggAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatggaacagggttcatcatgagac                                                                       <  2:68840‑M2/144‑76 (MQ=255)
                                                                                  gAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaac                                                                 <  1:261832‑M2/149‑82 (MQ=255)
                                                                                   aaaCTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcat                                                                     <  2:300089‑M2/144‑78 (MQ=255)
                                                                                      tcgaggaaaggaaatgactgagtcagccgagaagaatttccccgcttattcgcacctcccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTg                                                                  <  2:12895‑M2/84‑1 (MQ=255)
                                                                                      atgaagaaaggaaacgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGc                                                             <  1:488111‑M2/89‑1 (MQ=255)
                                                                                         aagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGTGCAGCTGACGCGCCTCGACCTTGTAAGCCGt                                                          >  1:834347‑M2/58‑149 (MQ=255)
                                                                                              atgaaatgaccgagccagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAaga                                                     <  1:273919‑M2/97‑1 (MQ=255)
                                                                                               ttctctcaaaaaaaattgagctaATCGCTCGCCAGGTCCCCGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttc                                                         >  2:443072‑M2/9‑55 (MQ=255)
                                                                                               tggacCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTGCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccga                                                    >  1:660234‑M2/3‑55 (MQ=255)
                                                                                               tgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGATAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAagag                                                    <  1:603507‑M2/98‑1 (MQ=255)
                                                                                                 cacCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagagcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgc                                                       >  2:2818‑M2/2‑53 (MQ=255)
                                                                                                  aatgactgaggccgccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTc                                                 <  1:153935‑M2/101‑1 (MQ=255)
                                                                                                  aaagactgagtcaaccgagaagaattgccccgcgtattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAATCCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTc                                                 <  1:10180‑M2/101‑1 (MQ=255)
                                                                                                      gAAAAAAATTGGGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca                                                  >  2:397378‑M2/1‑48 (MQ=255)
                                                                                                      gAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagtacagggttcatcatgagtcatcaacttaccttcgccgacagtgaa                                             <  1:291747‑M2/149‑102 (MQ=255)
                                                                                                      gAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaa                                             >  1:663351‑M2/1‑48 (MQ=255)
                                                                                                      gAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca                                                  <  2:544236‑M2/144‑97 (MQ=255)
                                                                                                        tgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTc                                           >  1:206812‑M2/43‑149 (MQ=255)
                                                                                                        aaaaaaTTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt                                                <  2:295129‑M2/144‑99 (MQ=255)
                                                                                                           aaaTTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaa                                             >  2:237518‑M2/1‑43 (MQ=255)
                                                                                                            aaTTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaat                                            <  2:764262‑M2/144‑103 (MQ=255)
                                                                                                             aTTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagca                                      <  1:234169‑M2/149‑109 (MQ=255)
                                                                                                             aTTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggggcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagca                                      >  1:317094‑M2/1‑41 (MQ=255)
                                                                                                              agccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTcc                                          <  2:560877‑M2/108‑1 (MQ=255)
                                                                                                               gccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCAAGGTCCAAACGc                                    >  1:859354‑M2/36‑149 (MQ=255)
                                                                                                                ccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCaa                                        <  2:561158‑M2/110‑1 (MQ=255)
                                                                                                                   cAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcgtcatgagtcatcagcttaccttcgcggacagtgaattcaggag                                     <  2:119750‑M2/144‑110 (MQ=255)
                                                                                                                    aaaTCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccgtgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgcggacagtgaattcggcggtgaggg                               <  1:266134‑M2/149‑116 (MQ=255)
                                                                                                                    aaaTCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcg                               <  1:123678‑M2/149‑116 (MQ=255)
                                                                                                                     aagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGCCGTCCAAACGCAAGTcc                              >  1:189377‑M2/30‑149 (MQ=255)
                                                                                                                     aagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCa                                   >  2:168253‑M2/30‑144 (MQ=255)
                                                                                                                      agatgcctcccgcttattcgcacctgccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAACCCCTACAAGCGCAGGTGACGCGCCTCGACCGTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCt                             <  1:410631‑M2/121‑1 (MQ=255)
                                                                                                                      aTCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgcc                             >  1:332761‑M2/1‑32 (MQ=255)
                                                                                                                        cgctcgcCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgt                           >  1:68361‑M2/1‑30 (MQ=255)
                                                                                                                         gctcgcCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagagccgtc                          <  1:6050‑M2/149‑121 (MQ=255)
                                                                                                                             gcCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagac                      >  1:808708‑M2/1‑25 (MQ=255)
                                                                                                                              cccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGGTAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCATGTCCTGTTACGGa                     <  1:634369‑M2/129‑1 (MQ=255)
                                                                                                                              cccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGa                     >  1:502528‑M2/21‑149 (MQ=255)
                                                                                                                                cgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGacc                   >  1:412433‑M2/19‑148 (MQ=255)
                                                                                                                                cgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACt                   >  1:787213‑M2/19‑149 (MQ=255)
                                                                                                                                 ggTTCACGAATCAATGCCGAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaactgggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcaga                       >  2:617072‑M2/1‑21 (MQ=255)
                                                                                                                                      aCCAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaaga             >  1:327026‑M2/1‑16 (MQ=255)
                                                                                                                                        gAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagaga           >  1:813729‑M2/1‑14 (MQ=255)
                                                                                                                                        gAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagaga           >  1:122261‑M2/1‑14 (MQ=255)
                                                                                                                                           accttccCCAAAGGAATCAGGGAGTGCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACt        <  1:548390‑M2/142‑1 (MQ=255)
                                                                                                                                               tGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttctt    >  1:29615‑M2/1‑7 (MQ=255)
                                                                                                                                                 ccTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgt  <  1:448113‑M2/149‑145 (MQ=255)
                                                                                                                                                  |                                                                                                                                                   
AGCAACGCATAGCTTCACATAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCT  >  CP009273/3178108‑3178401

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.