| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | CP009273 | 3,528,829 | (GTTTTCAGCCAG)1→2 | coding (399/1353 nt) | envZ ← | sensory histidine kinase in two‑component regulatory system with OmpR |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3528811 = | 9 (0.080) | 173 (1.550) | 104/278 | 0.0 | 96.5% | coding (417/1353 nt) | envZ | sensory histidine kinase in two‑component regulatory system with OmpR |
| ? | CP009273 | = 3528822 | 4 (0.040) | coding (406/1353 nt) | envZ | sensory histidine kinase in two‑component regulatory system with OmpR | |||||
Only 100 of 355 total aligned reads displayed.
CGACCAACGGTCGGTTCTGGATACGAATAAACAGCCACGCCCCGCCTATCGCCAATAGCATAATCGCCAGCGTATAGCGGAACAGCGGAGAGAAATCGCCCTGATGAATTTCGGTCAGCGGCACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGG > CP009273/3528666‑3528959 | cGACCATCTGCCGGTTCTGTATACCAATAAACAGCCACGCCCCGCCTATCGCCAATAGCATAATCGCCAGCGTATAGCGGAACAGCGGAGAGAAATCGCCCTGATGAAGTTCGGTCAGTGGCACGCGTACCCAGATATTGGGCGACAGc < 2:166959/149‑1 (MQ=255) tctggatacgaataaacagccacgccccgcctatcgccaatagcataatcgccagcgtatagcggaacagcggagagaaatcgccctgatgaatttcggtcagcggcacgcgtacccagatattgggcgacagccaggttttca > 1:193245‑M1/143‑144 (MQ=255) ccAACGGTCGGTTCTGGATACGAATAAACAGCCACGCCCCGCCTATCGCCAATAGCATAATCGCCAGCGTATAGCGGAACAGCGGAGAGAAATCGCCCTGATGAATTTCGGTCAGCGGCACGCGTACCCAGATATTGGGCGACAGCCAg < 2:1569657/149‑1 (MQ=255) ccAACGGTCGGTTCTGGATACGAATAAACAGCCACGCCCCGCCTATCGCCAATAGCATAATCGCCAGCGTATAGCGGAACAGCGGAGAGAAATCGCCCTGATGAATTTCGGTCAGCGGCACGCGTACCCAGATATTGGGCGACAGCCAg < 2:1560792/149‑1 (MQ=255) ccAACGGTCCGTTCTGGCTACGAAGAAACCGCCACGCCCCGCCTATCCCCAATAGCATAATCGCCAGCGTATAGCGGAACAGCGGAGAGAAATCGCCCTGATGAATTTCGGTCAGCGGCACGCGTACCCAGTTATTGGGCGACAGCCAg < 2:293343/149‑1 (MQ=255) acgaataaacagccacgccccgcctatcgccaatagcataatcgccagcgtatagcggaacagcggagagaaatcgccctgatgaatttcggtcagcggcacgcgtacccagatattgggcgacagccaggttttcagccaggttttca > 2:1158202‑M1/136‑149 (MQ=255) acgaataaacagccacgccccgcctatcgccaatagcataatcgccagcgtatagcggaacagcggagagaaatcgccctgatgaatttcggtcagcggcacgcgtacccagatattgggcgacagccaggttttcagccaggttttca < 2:1627008‑M1/14‑1 (MQ=255) acgaataaacagccacgccccgcctatcgccaatagcataatcgccagcgtatagcggaacagcggagagaaatcgccctgatgaatttcggtcagcggcacgcgtacccagatattgggcgacagccaggttttcagccaggc < 1:1015075‑M1/9‑2 (MQ=255) gaataaacagccacgccccgcctatcgccaatagcataatcgccagcgtatagcggaacagcggagagaaatcgccctgatgaatttcggtcggcggcacgcgtacccagatattgggcgaccgccaggttttcagacagggttgcagc < 2:518742‑M1/16‑1 (MQ=255) gTTCTGGATACGAATAAACAGCCACGCCCCGCCTATCGCCAATAGCATAATCGCCAGCGTATAGCGGAACAGCGGAGAGAAATCGCCCTGATGAATTTCGGTCAGCGGCACGCGTACCCAGATATTGAGCGGCAGCCAGGTTTTcagcc < 2:355860‑M2/149‑6 (MQ=255) aataaacagccacgccccgcctatcgccaatagcataatcgccagcgtatagcggaacagcggagagaaatcgccctgatgaatttcggtcagcggcacgcgtacccagatattgggcgacagccaggttttcagccaggtttt < 1:1342969‑M1/12‑1 (MQ=255) ttCTGGATACGAATAAACAGCCACGCCCCGCCTATCGCCAATAGCATAATCGCCAGCGTATAGCGGAACAGCGGAGAGAAATCGCCCTGATGAATTTCGGTCAGCGGCACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTcagcca > 2:184728‑M2/1‑143 (MQ=255) taaacagccacgccccgcctatcgccaatagcataatcgccagcgtatagcggaacagcggagagaaatcgccctgatgaatttcggtcagcggcacgcgtacccagatattgggcgacagccaggttttccgcccggttttca < 1:701343‑M1/14‑1 (MQ=255) acagccacgccccgcctatcgccaatagcataatcgccagcgtatagcggaacagcggagagaactcgccctgatgaatttcggtcagcggcacgcgtacccagatattgggcgacagccaggtttcCAGCCGGGTTTTCAGCCAgacg < 2:628866‑M1/22‑1 (MQ=255) acagccacgccccgcctatcgccaatagcataatcgccagcgtatagcggaacagcggagagaaatcgccctgatgaatttcggtcagcggcacgcgtacccagatattgggcgacagccaggttttCAGCCAGGTTTTCAGCCAgacg < 2:655359‑M1/22‑1 (MQ=255) acagccacgccccgcctatcgccaatagcataatcgccagcgtatagcggaacagcggagagaaatcgccctgatgaatttcggtcagcggcacgcgtacccagatattgggcgacagccaggctttcagccaggatttcagcc < 1:1703916‑M1/17‑1 (MQ=255) ccgAATAAACCGCCACGCCCCGCCTAGCGCCAATAGCATAATCGCCAGCGTATAGCGGAACAGCGGAGAGAAATCGCCCTGATGAATTTCGGTCAGCGGCACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTcagccaggttttca > 2:887923‑M2/2‑135 (MQ=255) aCGAATAAACAGCCACGCCCCGCCTATCGCCAATAGCATAATCGCCAGCGTATAGCGGAACAGCGGAGAGAAATCGCCCTGATGAATTTCGGTCAGCGGCACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTcagccaggttttca > 2:563490‑M2/1‑135 (MQ=255) aCGAATAAACAGCCACGCCCCGCCTATCGCCAATAGCATAATCGCCAGCGTATAGCGGAACAGCGGAGAGAAATCGCCCTGATGAATTTCGGTCAGCGGCACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTcagccaggt < 1:1443411‑M2/144‑10 (MQ=255) cacgccccgcctatcgccaatagcataatcgccagcgtatagcggaacagcggagagaaatcgccctgatgaatttcggtcagcggcacgcgtacccagatattgggcgacagccaggttttCAGCCAGGTTTTCAGCCAGACGACAgg > 2:363511‑M1/123‑149 (MQ=255) cGAATAAACAGCCACGCCCCGCCTATCGCCAATACCATAATCGCCAGCGGATAGCGGAACAGCGGAGAGAAATCGCCCTGATGAATTTCGGTCAGCGGCACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTcagccaggttttcag > 2:232775‑M2/1‑134 (MQ=255) gAATAAACAGCCACGCCCCGCCTATCGCCAATAGCATAATCGCCAGCGTATAGCGGAACAGCGGAGAGAAATCGCCCTGATGAATTTCGGTCAGCGGCACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTcagccaggttt < 1:1025319‑M2/144‑12 (MQ=255) gAATAAACAGCCACGCCCCGCCTATCGCCAATAGCATAATCGCCAGCGTATAGCGGAACAGCGGAGAGAAATCGCCCTGATGAATTTCGGTCAGCGGCACGCGTACCCAGATATTGGGCGACAGCCAGGTGTTcagccaggttt < 1:1024532‑M2/144‑12 (MQ=255) acgccccgcctatcgccaatagcataatcgccagcgtatagcggaacagcggagagaaatcgccctgatgaatttcggtcagcggcacgcgtacccagatattgggcgacagccaggttttCAGCCAGGTTTTCAGCCAgacga < 1:1137620‑M1/23‑1 (MQ=255) tAAACAGCCACGCCCCGCCTATCGCCAATAGCATAATCGCCAGCGTATAGCGGAACAGCGGAGAGAAATCGCCCTGATGAATTTCGGTCAGCGGCACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTcagccaggttttcagccag > 2:1389817‑M2/1‑130 (MQ=255) cgcctatcgccaatagcataatcgccagcgtatagcggaacagcggagagaaatcgccctgatgaatttcggtcagcggcacgcgtacccagatattgggcgacagccaggttttCAGCCAGGTTTTCAGCCAGACGACAGGCGAACtt < 2:323094‑M1/34‑1 (MQ=255) aGCCACGCCCCGCCTATCGCCAATAGCATAATCGCCAGCGTATAGCGGAACAGCGGAGAGAAATCGCCCTGATGAATTTCGGTCAGCGGCACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTcagccaggttttcagccagacgac < 2:842075‑M2/149‑25 (MQ=255) aGCCACGCCCCGCCTATCGCCAATAGCATAATCGCCAGCGTATAGCGGAACAGCGGAGAGAAATCGCCCTGATGAATTTCGGTCAGCGGCACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTcagccagggtttcagccag < 1:1579722‑M2/144‑20 (MQ=255) gCCACGCCCCGCCTATCGCCAATAGCATAATCGCCAGCGTATAGCGGAACAGCGGAGAGAAATCGCCCTGATGAATTTCGGTCAGCGGCACGCGTACCTAGATATTGGGCGACAGCCAGGTTTTcagccaggttttcagccagacgaca > 2:1363957‑M2/1‑124 (MQ=255) ctatcgccaatagcataatcgccagcgtatagcggaacagcggagagaaatcgccctgatgaatttcggtcagcggcacgcgtacccagatattgggcgacagccaggttttCAGCCAGGTTTTTAGCCAGACGACAGGCGAACTTttg > 2:1470192‑M1/113‑149 (MQ=255) atcgccaatagcataatcgccagcgtatagcggaacagcggagagaaatcgccctgatgaatttcggtcagcggcacgcgtacccagatattgggcgacagccaggttttCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTttgtt > 2:622208‑M1/111‑149 (MQ=255) atcgccaatagcataatcgccagcgtatagcggaacagcggagagaaatcgccctgatgaatttcggtcagcggcacgcgtacccagatattgggcgacagccaggttttCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTttgtt < 2:1308598‑M1/39‑1 (MQ=255) aCGCCCCGCCTATCGCCAAGAGCATAATCGCCAGCGTATAGCGGAACAGCGGAGAGAAATCGCCCTGATGAATTTCGGTCAGCGGCACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTcagccaggttttcagccagacgacaggc > 2:742466‑M2/1‑121 (MQ=255) gccaatagcataatcgccagcgtatagcggaacagcggagagaaatcgccctgatgaatttcggtcagcggcacgcgtacccagatattgggcgacagccaggttttCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTttg > 1:162196‑M1/108‑144 (MQ=255) gccaatagcataatcgccagcgtatagcggaacagcggagagaaatcgccctgatgaatttcggtcagcggcacgcgtacccagatattgggcgacagccaggttttCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGAc < 2:1403614‑M1/42‑1 (MQ=255) gccaatagcataatcgccagcgtatagcggaacagcggagagaaatcgccctgatgaatttcggtcagcggcacgcgtacccagatattgggcgacagccaggttttCAGCCAGGATTTCAGCCAGACGACAGGCGAACTTttg < 1:1460819‑M1/37‑1 (MQ=255) gCCCCGCCTATCGCCAATAGCATAATCGCCAGCGTATAGCGGAACAGCGGAGAGAAGTCGCCCTGATGAATTTCGGTCAGCGGCACGCGTACCCAGATATTGGGCGCCAGCCAGGTTTTcagccaggctctcagcccaacgacg < 1:1409390‑M2/144‑26 (MQ=255) tagcataatcgccagcgtatagcggaacagcggacacaaatctccctgatgatgttcggtcagctgcacgcgtacccagatattgggcgacagccaggttttCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGAc > 1:434402‑M1/103‑144 (MQ=255) tATCGCCAATAGCATAATCGCCAGCGTATAGCGGAACAGCGGAGAGAAATCGCCCTGATGAATTTCGGTCAGCGGCACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTcagccaggttttcagccagacgacaggcgaacttttgt > 2:1667073‑M2/1‑111 (MQ=255) ataatcgccagcgtatagcggaacagcggagagaaatcgccctgatgaatttcggtcagcggcacgcgtacccagatattgggcgacagccaggttttCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAAcgcg < 2:230084‑M1/51‑1 (MQ=255) aTCGCCAATAGCATAATCCCCAGCGTATAGCGGAACCGCGGAGAGAAATCGCCCTGATGAATTTCGGTCAGCGGCACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTcagccaggttttcagccagacgacaggcgaactc > 1:1436951‑M2/1‑110 (MQ=255) aatcgccagcgtatagcggaacagcggagagaaagcgccctgatgaatttcggtcagcggcacgcgtacccagatattgggcgacagccaggttttCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAAc > 1:1083441‑M1/97‑144 (MQ=255) gCCACTGGCATAAGCGCCAGCGTATAGCGGAACAGCGGAGAGAAATCGCCCTGATGAATTTCGGTCAGCGGCACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTcagccaggttttcagccagacgacaggcgaacttttg > 1:733693‑M2/1‑107 (MQ=255) atcgccagcgtatagcggaacagcggagagaaatcgccctgatgaatttcggtcagcggcacgcgtacccagatattgggcgacagccaggttttCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAAcg < 1:1434867‑M1/49‑1 (MQ=255) ccAATAGCATAATCGCCAGCGTATAGCGGAACAGCGGAGAGAAATCGCCCAGAAGAATTTCGGTCAGCGGCACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTcagccaggtattcagccagacgacaggcgaacttttgttgacc < 2:605979‑M2/149‑44 (MQ=255) cAATCGCATAATCGCCAGCGTATAGCGGAACAGCGGAGAGAAATCGCCCTGATGAATTTCGGTCAGCGGCACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTcagccaggttttcagccagacgacaggcgaacttttgtt > 1:647823‑M2/1‑105 (MQ=255) gccagcgtatagcggaacagcggagagaaaccgccctgatgaatttcggtcagcggcacgcgtacccagatattgggcgacagccaggttttCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACgcgc > 1:1388717‑M1/93‑144 (MQ=255) ccagcgtatagcggaacagcggagagacatggtgctgatgaatttcggtcagcggcacgcgtacccagatattgggcgacagccaggttttCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTcc < 2:1462329‑M1/58‑1 (MQ=255) ccagcgtatagcggaacagcggagagaaatcgccctgatgaatttcggtcagcggcacgcgtacccagatattgggcgacagccaggttttCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTcc > 2:1718975‑M1/92‑149 (MQ=255) gCATAACCGCCAGCGTACAGCGGAACAGCGGATATAAATCGCCCTGATGTATTTCGGTCAGCGGCACGCGTACCCAGATCTTGGGCGACAGCCAGGTTTTcagccaggttttcagccagacgacaggcgaacttttgttgacctcaacg > 2:1246611‑M2/1‑100 (MQ=255) tAATCGCCAGCGTATAGCGGAACAGCGGAGAGAAATCGCCCTGATGAATTTCGGTCAGCGGCACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTcagccaggttttcagccagacgacaggcgaacttttgttgacctcaacgggc < 2:1567234‑M2/149‑53 (MQ=255) aaTCGCCAGCGTATAGCGGAACAGCGGAGAGAAATCGCCCTGATGAATTTCGGTCAGCGGCACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTcagccaggttttcagccagacgacaggcgaacttttgttgacctcaacgcgca > 2:493507‑M2/1‑96 (MQ=255) gcggaacagcggagagaaatcgccctgatgaatttcggtcagcggcacgcgtacccagatattgggcgacagccaggttttCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCgg > 1:5084‑M1/82‑144 (MQ=255) gCCAGCGTATAGCGGAACAGCGGAGCGATAGTACCCTTGTGAATTGCGGTCAGCGGCACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTcagccaggttttcagccagacgacaggcgaacttttgttgacctcaaagcgc > 1:824175‑M2/1‑92 (MQ=255) gCCAGCGTATAGCGGAACAGCGGAGAGAAATCGCCCTGATGAATTTCGGTCAGCGGCACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTcagccaggttttcagccagacgacaggcgaacttttgttgacctcaacgcgc < 1:708886‑M2/144‑53 (MQ=255) gCCAGCGTATAGCGGAACAGCGGAGAGAAATCGCCCTGATGAATTTCGGTCAGCGGCACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTcagccaggttttcagcaagacgacaggcgaacttttgttgaactcaacgcgc < 1:1180835‑M2/144‑53 (MQ=255) ccAGCGTATAGCGGAACAGCGGAGAGAAATCGCCCTGATGAATTTCGGTCAGCGGCACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTcagccaggttttcagccagacgacaggcgaacttttgttgacctcaacgcgcacttcc < 2:159474‑M2/149‑59 (MQ=255) aacagcggagagaaatcgccctgatgaatttcggtcagcggcacgcgtacccagatattgggcgacagccaggttttCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAg > 2:1446347‑M1/78‑149 (MQ=255) accgcggagagaaatcgccctgatgaatttcggtcagcggcacgcgtacccagatattgggcgacagccaggttttCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGgccgc > 1:410303‑M1/77‑144 (MQ=255) gTATAGCGTAACAGCGGAGAGAAATCGCCCTGATGAATTTCGGTCAGCGGCACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTcagccaggttttcagccagacgacaggcgaacttttgttgacctcaacgcgcacttccgtcgg > 2:1518665‑M2/1‑86 (MQ=255) tataGCGGAACAGCGGAGAGAAATCGCCCTGATGAATTTCGGTCAGCGCCCGACGTATCCAGATATTGGGCGACAGCCAGGTTTTcagccaggttttcagccagacgacaggcgaacttttgttgacctcaacgcgcacttccgtcggg > 2:1853655‑M2/1‑85 (MQ=255) gagtgaaatcgccctgatgaatttcggtcagcggcacgcgtacccagatattgggcgacagccaggttttCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGtt > 1:1269250‑M1/71‑144 (MQ=255) gagagaaatcgccctgatgaatttcggtcagcggcacgcgtacccagatattgggcgacagccaggtgttCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAgtg < 1:1520185‑M1/74‑2 (MQ=255) cGGAACAGCGGAGAGAAATCGCCCTGATGAATTTCGGTCAGCGGCACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTcagccaggttttcagccagacgacaggcgaacctttgttgccctcaacgcgcacttccgtcgggccgcc < 2:316200‑M2/149‑70 (MQ=255) agaaatcgccctgatgaatttcggtcagcggcacgcgtacccagatattgggcgacagccaggttttCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGcc > 2:1976707‑M1/68‑149 (MQ=255) aaatcgccctgatgaatttcggtcagcggcacgcgtacccagatattgggcgacagccaggttttCAGCCAGGGTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTGGCTGcgccct < 2:551910‑M1/84‑3 (MQ=255) aaatcgccctgatgaatttaggtcagcggcacgcgtacccagatattgggcgacagccaggttttCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTtgctgc > 1:295673‑M1/66‑144 (MQ=255) gagggtAATCGGCCTGATGAATTTCGGTCAGCGGCACGCGTACCCAGATGTTGGGCGACAGCCAGGTTTTcagccaggttttcagccagacgacaggcgaacttttgttgacctcaacgcgcacttccgtcgggccgcccagtt > 1:171928‑M2/1‑70 (MQ=255) tgaatttcggtcagcggcacgcgtacccagatattgggcgacagccaggttttCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCATCTGATGGCTTaa > 2:395913‑M1/54‑149 (MQ=255) tgaatttcggtcagcggcacgcgtacccagatattgggcgacagccaggttttCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCATCTGATGGCTTaa > 2:955865‑M1/54‑149 (MQ=255) gaatttcggtcagcggcacgcgtacccagatattgggcgacagccaggttttCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCATCTGATGGc < 1:870541‑M1/92‑1 (MQ=255) gaatttcggtcagcggcacgcgtacccagatattgggcgacagccaggttttCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCATCTGATGGCTTAAg > 2:1813559‑M1/53‑149 (MQ=255) tctcactcagcggcacgagtacccagatattgggcgacagccaggttttCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCCTCTGATGgctca < 1:1305140‑M1/95‑3 (MQ=255) ttcggtcagtggcacgcgtacccagatattgggcgacagccaggttttCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCATCTGATGGCTTaa > 1:1718753‑M1/49‑144 (MQ=255) cTGATGAATTTCGGTCAGCGGCACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTcagccaggttttcagccagacgacaggcgaacttttgttgacctcaacgcgcacttccgtcgggccgcccagttgctgcgccatctgatggc < 2:715330‑M2/149‑93 (MQ=255) tgatgaATTTCGGTCAGCGGCACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTcagccaggttttcagccagacgacaggcgaacttttgttgacctcaacgcgcacttccgtcgggccgcccagttgctgcgccatctgatggct < 2:1903782‑M2/149‑94 (MQ=255) gtcagcggcacgcgtacccagatattgggcgacagccaggttttCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCATCTGATGGCTTAAGAGTTCATa < 2:1755668‑M1/105‑1 (MQ=255) agcggcacgcgtacccagatattgggcgacagccaggttttCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAgtg < 2:815717‑M1/108‑1 (MQ=255) agcggcacgcgtacccagatattgggcgacagccaggttttCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAgtg < 2:1253984‑M1/108‑1 (MQ=255) cggcacgcgtacccagatattgggcgacagccaggttttCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGtt < 2:1098837‑M1/110‑1 (MQ=255) ttCGGTCAGCGGCACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTcagccaggttttcagccagacgacaggcgaacttttgttgacctcaacgcgcacttccgtcgggccgcccagttgctgcgccatctgatggcttaagaatt < 2:1189037‑M2/149‑102 (MQ=255) cgtccccagatattgtgcgacagtcaggttttCAGCCAGGTTTTCAGCCAGACGCCAGTCGAACGTTTGTTGACCTCAACGTGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCATCTGCTGGCTTAAGAATTCATAGTGTTgc > 1:803494‑M1/33‑144 (MQ=255) acccagatattgggcgacagccaggttttCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACg > 2:823505‑M1/30‑149 (MQ=255) gCGGCACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTcagccaggttttcagccagacgacaggcgaacttttgttgacctcaacgcgcacttccgtcgggccgcccagttgctgcgccatctgatggcttaagaattcat > 1:1479889‑M2/1‑40 (MQ=255) agatattgggcgacagccaggttttCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGa > 2:1735899‑M1/26‑149 (MQ=255) gTACCCAGATATTGGGCGACAGCCAGGTTTTcagccaggttttcagccagacgacaggcgaacttttgttgacctcaacgcgcacttccgtcgggccgcccagttgctgcgccatctgatggcttaagaattcatagtgttgcgcccaa > 2:1631350‑M2/1‑31 (MQ=255) gTACCCAGATATTGGGCGACAGCCAGGGTTTcagccaggctttcagccagacgacaggcgaacttttgttgacctcaacgcgcacttccgtcgggccgcccagtggctgcgccatctgatggcttaagaattcatagtgttgcgcccaa < 2:398407‑M2/149‑119 (MQ=255) ctacagccaggttttCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGc > 1:920954‑M1/16‑144 (MQ=255) ccAGATATTGGGCGACAGCCAGGTTTTcagccaggttttcagccagacgacaggcgaacttttgttgacctcaacgcgcacttccgtcgggccgcccagttgctgcgccatctgatggcttaagaattcatagtgttgcgcccaacgca < 2:169238‑M2/149‑123 (MQ=255) gacagccaggttttCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACTTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCGGACCTGcc < 1:1178733‑M1/130‑1 (MQ=255) agccaggttttCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCctct < 1:1671225‑M1/133‑1 (MQ=255) ccaggttttCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAg < 2:332316‑M1/140‑1 (MQ=255) ccaggttttCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAg > 2:1426762‑M1/10‑149 (MQ=255) caggttttCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCg < 1:978742‑M1/136‑1 (MQ=255) cacgttttCAGCCAGGTTTTCAGCCAGACGACACGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCATCTGATGGCATACGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCg < 1:364084‑M1/136‑1 (MQ=255) aggttttCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCATCTGATGGCTTAAGAATTCCTAGGGTTGCGCCCAACGGAGACCTGCCTCTTCgg < 1:1557474‑M1/137‑1 (MQ=255) aggttttCAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCCACGCAGACCTGCCTCTTCgg < 1:1114113‑M1/137‑1 (MQ=255) gggCGACAGCCAGGTTTTcagccaggttttcagccagacgacaggcgaacttttgttgacctcaacgcgcacttccgtcgggccgcccagttgctgcgccatctgatggcttaagaattcatagtgttgcgcccaacgcagacctgcct < 2:1540632‑M2/149‑132 (MQ=255) cGACAGCCAGGTTTTcagccaggttttcagccagacgacaggcgaacttttgttgacctcaacgcgcacttccgtcgggccgcccagttgctgcgccatctgatggcttaagaattcatagtgttgcgcccaacgcagacctgcctctt > 2:253735‑M2/1‑15 (MQ=255) cagccaggttttcagccaggttttcagccagacgacaggcgaacttttgttgacctcaacgcgcacttccgtcgggccgcccagttgctgcgccatctgatggcttaagaattcatagtgttgcgcccaacgcagacctgcctcttcgg > 2:847374‑M2/1‑12 (MQ=255) | CGACCAACGGTCGGTTCTGGATACGAATAAACAGCCACGCCCCGCCTATCGCCAATAGCATAATCGCCAGCGTATAGCGGAACAGCGGAGAGAAATCGCCCTGATGAATTTCGGTCAGCGGCACGCGTACCCAGATATTGGGCGACAGCCAGGTTTTCAGCCAGACGACAGGCGAACTTTTGTTGACCTCAACGCGCACTTCCGTCGGGCCGCCCAGTTGCTGCGCCATCTGATGGCTTAAGAATTCATAGTGTTGCGCCCAACGCAGACCTGCCTCTTCGGCAGCCTCGTTGG > CP009273/3528666‑3528959 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |