| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,135,510 | Δ1 bp | 6.2% | coding (839/1704 nt) | hybC ← | hydrogenase 2, large subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,135,510 | 0 | A | . | 6.2% | 151.1 / 6.4 | 64 | coding (839/1704 nt) | hybC | hydrogenase 2, large subunit |
| Reads supporting (aligned to +/- strand): ref base A (27/30); new base . (2/2); total (30/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.75e-01 | |||||||||||
CTGAATGCCTTTGATCAGGTATTCATCGGAATGAGAAGTGATCGGACGATACGAGGACAGATCCGCATTCTCAATGTAGCCGCCCGGGAACAGGAAGCTGCCGTTTTTACTGTCGGTCGGGAATTCCGGCACGCTCAGGTAGTTCACCGCACCTTTACCGCGTGTCAGCCATTCCGGGTAGAACGCGGCAATAACTGCGGTATCAACCTTATAAACCTGCTCAACAAAGTCGCTCAGTTTGTCGATGAAAGACTTGATGTACATCAGGCGCTCAAGGTTCAGCACGCCCAAACC > CP009273/3135365‑3135658 | cTGAATGCCTTTGCTCAGGTATTCATCGGAATGAGAAGTGATCGGACGATACGAGGACAGATCCGCATTCTCAATGTAGCCGCCCGGGAACAGGAAGCTGCCGTTTTTACTGTCGGTCGGGAATTCCGGCACGCTCAGGTAGTTCACCg < 1:302752/149‑1 (MQ=255)cTGAATGCCTTTGATCAGGTATTCATCGGAATGAGAAGTGATCGGACGATACGAGGACAGATCCGCATTCTCAATGTAGCCGCCCGGGAACAGGAAGCTGCCGTTTTTACTGTCGGTCGGGAATTCCGGCACGCTCAGGTAGTTCACCg > 1:1167351/1‑149 (MQ=255) tGAATGCCTTTGATCAGGTATTCATCGGAATGAGAAGTGATCGGACGATACGAGGACAGATCCGCATTCTCAATGTAGCCGCCCGGGAACAGGAAGCTGCCGTTTTTACTGTCGGTCGGGAATTCCGGCACGCTCAGGTAGTTCACCGc < 2:1118765/149‑1 (MQ=255) aaTGCCTTTGATCAGGTATGCATCGGAATGAGAAGTGATCGGACGATACGAGGACAGATCCGCATTCTCAATGTAGCCGCCCGGGAACAGGAAGCTGCCGTTTTTACTGTCGGTCGGGAATTCCGGCACGCTCAGGTAGTTCACCGCAc < 1:309944/149‑1 (MQ=255) gCCTTTGATCAGGTATTCATCGGAATGAGAAGTGATCGGACGATACGAGGACAGATCCGCATTCTCAATGTAGCCGCCCGGGAACAGGAAGCTGCCGTTTTTACTGTCGGTCGGGAATTCCGGCACGCTCAGGTAGTTCACCGCACCtt < 2:572318/149‑1 (MQ=255) cTTTGATCAGGTATTCATCGGAATGAGAAGTGATCGGACGATACGAGGACAGATCCGCATTCTCAATGTAGCCGCCCGGGAACAGGAAGCTGCCGTTTTTACTGTCGGTCGGGAATTCCGGCACGCTCAGGTAGTTCACGGCACCTTTa > 1:62748/1‑149 (MQ=255) cTTTGATCAGGTATTCATCGGAATGAGAAGTGATCGGACGATACGAGGACAGATCCGCATTCTCAATGTAGCCGCCCGGGAACAGGAAGCTGCCGTTTTTACTGTCGGTCGGGAATTACGGCACGCTCAGGTAGTTCACCGCACCTTTa > 1:328056/1‑149 (MQ=255) tttGATCAGGTATTCATCGGAATGAGAAGTGATCGGACGATACGAGGACAGATCCGCATCCTCAATGTAGCCGCCCGGGAACAGGAAGCTGCCGTTTTTACTGTCGGTCGGGAATTCCGGCACGCTCAGGTAGTTCACCGCACCTTTAc > 1:825151/1‑149 (MQ=255) aTCAGGTATTCATCGGAATGAGAAGTGATCGGACGATACGAGGACAGATCCGCATTCTCAATGTAGCCGCCCGGGAACAGGAAGCGGCCGTTTTTGCTCTCGGTCGGGAATTAAGGCACGCTCCGGTAGTTCACCGCACCTTTACcgcg > 1:474319/1‑149 (MQ=255) tCAGGTATTCATCGGAATGAGAAGTGATCGGACGATACGAGGCCAGCTCCGCATTCTCAATGTAGCCGCCCGGGAACAGGAAGCTGCCGTTTTTACTGTCGATCGGGAATTCCGGCACGCTCAGGTAGTTCACCGCACCTTTACcccgc > 2:846105/1‑148 (MQ=255) cAGGTATTCATCGGAATGAGAAGTGATCGGCAGATAGAAGGTCATACCCGCATTCTCAATGTAGCCGCCCGGGAACAGGAAGCTGCCGTTTTTACTGTCGGTCGGGAATTCCGGCACGCTCAGGTAGTTCACCGCACCTTTACCGCgtg < 1:538094/149‑1 (MQ=255) cAGGTAGTCATCGGAATGAGAAGTGATCGGACGATACGAGGACCGAGCCGCATTCTCAATGTAGCCGCCCGGGAACAGGAAGCTGCCGTTTTTACTGTCGGTCGGGAATTCCGGCACGCTCAGGTAGTTCACCGCACCTTTACCGCgtg < 1:649849/149‑1 (MQ=255) aTCGGAATGAGAAGTGATCGGACGATACGAGGACAGATCCGCATTCTCAATGTAGCCGCCCGGGAACAGGAAGCTGCCGTTTTTACTGTCGGTCGGGAATTCCGGCACGCTCAGGTAGTTCACCGCACCTTTACCGCGTGTCAGCCAtt > 1:688436/1‑149 (MQ=255) aTCGGAATGAGAAGTGATCGGACGATACGAGGACAGATCCGCATTCTCAAGGTAGCCGCCCGGGAACAGGAAGCTGCCGTTTTTACTGTCGGTCGGGAATTCCGGCACGCTCAGGTAGTT‑‑CTGCACCTTTACCGCGCGTCAGCCATTcc > 2:1204505/1‑149 (MQ=255) aTCGGAATGAGAAGTGATCGGACGATACGAGGACAGATCCGCATTCACACTGTAGCCGCCCGGGAACAGGAAGCTCCCGTTTTTACTGTCGGTCGGGAATTCCGGCACGCTCAGTTAGTT‑‑CTGCACCTTTACCGCGTGTCAGCCATTcc > 2:602035/1‑149 (MQ=255) aTCGGAATGAGAAGTGATCGGACGATACGAGGACAGAGCCGCATTCTCAATGTAGCCGCCCGGGAACAGGAAGCTGCCGTTTTTACTGTCGGTCGGGAATTCCGGCACGCTCGGGTAGTTCACGGAATGTTTACCGCGTGTCAGCCAtt > 2:1121631/1‑149 (MQ=255) tGAGAAGTGATCGGACGATACGAGGACAGATCCGCATTCTCAATGTAGCCGCCCGGGAACAGGAAGCTGCCGTTTTTACTGTCGGTCGGGAATTCCGGCGCGCTCAGGTAGTTCACCACACCTTTACCGCGTGTCAGCCATCCgggggg > 2:309963/1‑147 (MQ=255) gaAGTGATCGGACGATACGAGGACAGATCCGCATTCTCAATGTAGCCGCCCGGGAACAGGAAGCTGCCGTTTTTACTGTCGGTCGGGAATTCCGGCACGCTCAGGTAGTTCACCGCACCTTTACCGCGTGTCAGCCATTCCGGGTAGaa > 2:1105247/1‑149 (MQ=255) gTGATCGGACGATACGAGGACAGATCCGCATTCTCAATGTAGCCGCCCGGGAACAGGAAGCTGCCGTTTTTACTGTCGGTCGGGAATTCCGGCACGCTCAGGTAGTTCACCGCCCCTTTACCGCGTGTCAGCCCTTCCGGGTAGAAcgc > 1:340936/1‑149 (MQ=255) aCGATACGAGGACAGATCCGCATTCTCAATGTAGCCGCCCGGGAACAGGAAGCTGCCGTTTTTACTGTCGGGCGGGAATTCCGGCACGCTCAGGTAGTTCACCGCACCTTTACCGCGTGTCAGCCATTCCGGGTAGAACGCGGCAATaa < 2:702179/149‑1 (MQ=255) gATACGAGGACAGATCCGCATTCTCAATGTAGCCGCCCGGGAACAGGAAGCTGCCGTTTTTACTGTCGGTCGGGAATTCCGGCACGCTCAGGTAGTTCACCGCACCTTTACCGCGTGTCACCCATTCCGGGTAGAACGCGGCCATAAcg > 2:652221/1‑148 (MQ=255) gATACGAGGACAGATCCGCATTCTCAATGTAGCCGCCCGGGAACAGGAAGCTGCCGTTATTACTGTCGGTCGGGAATTCCGGCACGCTCAGGTAGTTCGCCGCACCTTTCCCGCGTGTCAGCCCTTCCGGGTAGAACGCGGCCATAACt > 1:167007/1‑149 (MQ=255) aTACGAGGACAGATCCGCATTCTCAATGTAGCCGCCCGGGAACAGGAAGCTGCCGTTTTTACTGTCGGTCGGGAATTCCGGCACGCTCAGGGAGTTCACCGCATGTTTACCGCGTGTCAGACATTCGGGGTAGAAGTGGGCAATAAATg > 1:437544/1‑149 (MQ=255) aGGACAGATCCGCATTCTCAATGTAGCCGCCCGGGAACAGGAAGCTGCCGTTTTTACTGTCGGTCGGGAATTCCGGCACGCTCAGGTAGTTCCCCGCACCTTTACCGCGTGTCAGCCATTCCGGGTAGAACGCGGCAATAACTGCGGTa < 2:1034842/149‑1 (MQ=255) aCAGATCCGCATTCTCAATGTAGCCGCCCGGGAACAGGAAGCTGCCGTTTTTACTGTCGGTCGGGAATTCCGGCACGCTCAGGTAGTTCACCGCACCTTTACCGCGTGTCAGCCATTCCGGGTAGAACGCGGCAATAACTGCGGTATCa > 1:1114510/1‑149 (MQ=255) aGATCCGCATTCTCAATGTAGCCGCCCGGGAACAGGAGGCTGCCGTTTTTACTGTCGGTCGGGAATTCCGGCACGCTCAGGTAGTTCACCGCACCTTTACCGCGTGTCAGCCATTCCGGGTAGAACGCGGCTATATTTGCGGTATCatc < 2:423425/149‑3 (MQ=255) ccGCATTCTCAATGTAGCCGCCCGGGAACAGGAAGCTGCCGTTTTTACTGTCGGTCGGGAATTCCGGCACGCTCAGGTAGTTCACCGCACCTTTACCGCGTGTCAGCCATTCCGGGTAGAACGCGGCAATAACTGCGGTATCAACCTta > 1:1090195/1‑149 (MQ=255) ttCTCAATGTAGCCGCCCGGGAACAGGAAGCTGCCGTTTTTACTGTCGGTCGGGAATTCCGGCACGCTCAGGTAGTTCACCGCACCTTTACCGCGTGTCAGCCATTCCGGGTAGAACGCGGCAATAACTGCGGTATCAACATTATAAAc < 2:142031/149‑1 (MQ=255) tcAATGTAGCCGCCCGGGAACCGGAAGCTGCCGTTTTTACTGTCGGTCGGGAATTCCGGCACGCTCAGGTAGTTCACCGCACCTTTACCGCGTGTCAGCCATTCCGGGTAGAACGCGGCAATAACTGCGGTATCAACCTTATAAACCTg < 1:368793/149‑1 (MQ=255) tcAATGTAGCCGCCCGGGAACAGGAAGCTGCCGTTTTTACTGTCGGTCGGGAATTCCGGCACGCTCAGGTAGTTCACCGCACCTTTACCGCGTGTCAGCCATTCCGGGTAGAACGCGGCAATAACTGCGGTATCAACCTTATAAACCTg < 1:1200228/149‑1 (MQ=255) aTGTAGCCGCCCGGGAACAGGAAGCTGCCGTTTTTACTGTCGGTCGGGAATTCCGGCACGCTCAGGTAGTTCACCGCACCTTTACCGCGTGTCAGCCATTCCGGGTAGAACGCGGCAATAACTGCGGTATCAACCTTATAAACCTGCTc < 1:245074/149‑1 (MQ=255) aTGTAGCCGCCCGGGAACAGGAAGCTGCCGTTTTTACTGTCGGTCGGCAATGCCGGCACGCTCAGGTAGTTCACCTCCCCTTTACCGCGTATCAGCCATTCCGGGTAGAAAGCGCCAACAACTGCGGCATCAACCTTGTAAACCTGCTc > 2:386623/1‑149 (MQ=255) aGCCGCCCGGGAACAGGAAGCAGCCGTTTTTACTGTCGGTCGGGAATTCCGGCACGCTCAGGTAGTTCACCGCACCTTTACCGCGTGTCAGCCATTCCGGGTAGAACGCAGCAATAACTGCGGTATCAACCTTATAAACCTGCTcaaca > 1:877950/1‑149 (MQ=255) cGGGAACAGGAAGCTGCCGTTTTTACTGTCGGTCGGGAATTCCGGCACGCTCAGGTAGTTCACCGCACCTTTACCGCGTGTCAGCCATTCCGGGTAGAACGCGGCAATAACTGCGGTATCAACCTTATAAACCTGCTCAACAAAGTCGc > 1:1059377/1‑149 (MQ=255) gAACAGGAAGCTGCCGTTTTTACTGTCGGTCGGGAATTCCGGCACGCTCAGGTAGTTCACCGCACCTTTACCGCGTGTCAGCCATTCCGGGTAGAACGCGGCAATAACTGCGGTATCAACCTTATAAACCTGCTCAACAAAGTCGCTCa < 2:1167351/149‑1 (MQ=255) aGGAAGCTGCCGTTTTTACCGTCGGTCGGGAATTCCGGCACGCTCAGGTAGTTCACCGCACCTTTACCGCGTGTCAGCCATTCCGGGTAGAACGCGGCAATAACTGCGGTATCAACCTTATAAACCTGCTCAACAAAGTCGCTCAGttt < 2:388978/149‑1 (MQ=255) gAAGCTGCCGTTTTTACTGTCGGTCGGGAATTCCGGCACGCTCAGGTAGTTCACCGCACCTTTACCGCGTGTCAGCCATTCCGGGTAGAACGCGGCAATAACTGCGGTATCAACCTTATAAACCTGCTCAACAAAGTCGCTCAGTTTGt > 1:192983/1‑149 (MQ=255) gAAGCTGCCGTTTTTACTGTCGGTCGGGAATTCCGGAACGCTCAGGTAGTTCACAGCACCTTTACCGCGAGTCAGCCATTCCGGGTAGAACGCGGCAATAACTACGGTATCAACCTTATAAACCTGCACAAGAAAGTCGCTCAGTATGt > 1:112428/1‑149 (MQ=255) gCTGCCGTTGTTACTGTCGGTCGTGAATTCCGGCACGCTCAGGTAGTTCACCGCACCTTTACCGCGTGTCAGCCATTCCGGGTAGAACGCGGCAATAACTGCGGTATCAACCTTATAAACCTGCTCAACAAAGTCGCTCAGTTTGTCGa < 2:657405/149‑1 (MQ=255) ccTGCCGTTTTGACTGCCGGTCGGGAATTCCGGCACGCTCAGGTAGTTCACCGCACCTTTACCGCGTGTCAGCCATTCCGGGTAGAACGCGGCAATAACTGCGGTATCAACCTTATAAACCTGCTCAACAAAGTCGCTCAGTTTGTCGa < 2:939237/148‑1 (MQ=255) cTGTCGTTTTTACTGGCGGTCGGGAATTCCGGCACTCTCAGGTAGTTCACCGCACCTTTACCGCGTGTCAGCCATTCCGGGTAGAACGCGGCAATAACTGCGGTATCAACCTTATAAACCTGCTCAACAAAGTCGCTCCGTTTGTCGAt < 2:458553/149‑1 (MQ=255) gCCGTTTTTACGGGCGGTCGGGAATTCCGGCACGCTCAGGTAGTTCACCGCACCTTTACCGCGTGGCAGCCATTCCGGGTAGAACGCGGCAATAACTGCGGTATCAACCTTATAAACCTGCTCAACAAAGTCGCTCAGTTTGTCGATGa < 2:87286/149‑1 (MQ=255) tttttACTGTCGGTCGGGAATTCCGGCACGCTCAGGTAGTTCACCGCACCTTTACCGCGTGTCAGCCATTCCGGGTAGAACGCGGCAATAACTGCGGTATAAACCTTATAAACCTGCTCAACAAAGTCGCTCAGTGTGTCGATGAAAGa > 1:604387/1‑149 (MQ=255) tACTGTCGGTCGGGAATTCCGGGACGCTCAGGTAGTTCACCGCACCTTTACCGCGTGTCAGCCATTCCGGGTAGAACGCGGCAATAACTGCGGTATCAACCTTATAAACCTGCTCAACAAAGTCGCTCAGTTTGTCGATGAAAGACTTg < 2:476771/149‑1 (MQ=255) cTGCCGGTCGGGAATGCCGGCACGCTCAGGTAGTTCACCGCACCTTTACCGCGTGTCAGCCATTCCGGGTAGAACGCGGCAATAACTGCGGTATCAACCTTATAAACCTGCTCAACAAAGTCGCGCAGTTTGTCGATGAAAGACTTGAt < 2:340936/149‑1 (MQ=255) tcggtcggGAATTCCGGCCTGCTCAGGTAGTTCCCCGCACCTTTACCGCGTGTCAGCCATGCCGGGTAGAACGCGGCAATAACTGCGGTATCAACCTTATAAACCTGCTCAACAAAGGCGCTCAGTTTGTCGATGAAAGACTTGATGTa < 2:337067/149‑1 (MQ=255) ggtcggGAATTCCGGCACGCTCAGGTAGTTCACCGCACCTTTACCGCGTGTCAGCCATTCCGGGTAGAACGCGGCAATAACTGCGGTATCAACCTTATAAACCTGCTCAACAAAGTCGCTCAGTTTGTCGATGAAAGACTTGATGTACa > 2:800661/1‑149 (MQ=255) gtcggGAATTCCGGCACGCTCAGGTAGTTCACCGCACCTTTACCGCGTGTCAGCCATTCCGGGTAGAACGCGGCAATAACTGCGGTATCAACCTTATAAACCTGCTCAACAAAGTCGCTCAGTTTGTCGATGAAAGACTTGATGTACAt < 2:279543/149‑1 (MQ=255) cggGGACTCCCGCGCCCTCACGTAGGTCACCGCACCGTTACCGCGTGACACCCATTCCGGGTACAACGCGGCAATAACTGCGGTATCAACCTCATAAACCTGCTCAACCAAGTCGCTCAGTTTGTCGATGAAAGACTTGATGTACATCa < 1:1084463/149‑1 (MQ=255) cggGAATTCCGGCACGCTCAGGTAGTTCACCGCACCTTTACAGCGTTTCAGCCATTCCGGGTAGAACGCGGCAATAACTGCGGTATCAACCTTATAAACCTGCTAAACAAAGTCGCTCAGTTTGTCGATGAAAGACTTGATGTACATCa < 1:1154762/149‑1 (MQ=255) gtgAATTCCGGCACGCTCAGGTAGTTCACCGCACCTTTACCGCGTGTCCGCCATTCCGGGTAGAACGCGGCAATAACTGCGGTATCAACCTTATAAACCTGCTCAACAAAGTCGCTCAGTTTGTCGATGAAAGACTTGATGTACATCAg < 2:644327/147‑1 (MQ=255) ggAATTCCGGCACGCTCAGGTAGTTCACCGCACCTTTACCGCGTGTCAGCCATTCCGGGTAGAACGCGGCAATAACTGCGGTATCAACCTTATAAACCTGCTCACCAAAGTCGCTCAGTTTGTCGATGAAAGACTTGGTGTACATCAgg > 1:870098/1‑149 (MQ=255) ttCCGGCACGCTCAGGTAGTTCACCGCACCTTTACCGCGTGTCAGCCATTCCGGGTAGAACGCGGCAATAACTGGGGTATCAACCTTATAAACCTGCTCAACAAAGTCGCTCAGTTTGTCGATGCAAGACTTGGTGTACATCAGGCGCt > 1:748432/1‑149 (MQ=255) ttCCGGCACGCTCAGGTAGTTCACCGCACCTTTACCGCGTGTCAGCCATTCCGGGTAGAACGCGGCAATAACTGCGGTATCAACCTTATAAACCTGCTCAACAAAGTCGCTCAGTTTGTCGATGAAAGACTTGATGTACATCAGGCGCt > 1:865087/1‑149 (MQ=255) ccGGCCCGCTCAGGTAGTGCACCGCACCTTTACCGCGTGTCAGCCATTCCGGGTAGAACGCGGCAATAACTGCGGTATCAACCTTATAAACCTGCTCAACAAAGTCGCTCAGTTTGTCGATGAAAGACTTGATGTACATCAGGCGCTCa < 2:1117454/149‑1 (MQ=255) ccGGCACGCTCAGGTAGTTCACCGCACCTTTACCGCGTGTCAGCCATTCCGGGTAGAACGCGGCAATAACTGCGGTATCAACCTTATAAACCTGCTCAACAAAGTCGCTCAGTTTGTCGATGAAAGACTTGATGTACATCAGGCGCTCa < 1:123816/149‑1 (MQ=255) cGGCACGCTCAGGTAGTTCACCGCACCTTTACCGCGTGTCAGCCATTCCGGGTAGAACGCGGAAATAGCTGCGGTATCAACCTTGTAAACCTGCTCAACAAAGTCGCTCAGTTTTTCGATGAAAGACTTGATGTACGTCACGCGCTCaa > 1:290071/1‑149 (MQ=255) cgcgcgggtggtTCACCGCACCTTGACCGCTGGTCGGCCGTTCCGGGTAGAACGCGACAATAACTGCGGTATCAACCTTATAAACCTGCTCCACAACACCAATCAGTTCGAACCACCACGACTTGATGTACATCAGGCGCCCAAGGTTc > 2:871295/7‑149 (MQ=255) cTCAGGTAGTT‑‑CTGCACCTTTACCGCGTGTCAGCCATTCCGGGTAGAACGCGGCAATAACTGCGGTATCAACCTTATAAAACTGCTCAACAAAGTCGCTCAGTTTGTCGATGAAAGACTTGATGTACATCAGGCGCTCAAGGTTCAGCa < 1:1204505/149‑1 (MQ=255) cTCAGGTAGTT‑‑CTGCACCTTTACCGCGTGTCAGCCATTCCGGGTAGAACGCGGCAATAACTGCGGTATCAACCTTATAAAACTGCTCAACAAAGTCGCTCAGTTTCTCGATGAAAGACTTGATGTACATCAGGCGCTCAAGGTTCAGCa < 1:602035/149‑1 (MQ=255) cAGGTAGTTCACCGCACCTTTACCGCGTGTCAGCCATTCCGGGTAGAACGCGGCAATAACTGCGGTATCAACCTTATAAACCTGCTCAACAAAGTCGCTCAGTTTGTCGATGAAAGACTTGATGTACATCAGGCGCTCAAGGTTCAGCa < 2:1157543/149‑1 (MQ=255) cAGGTAGTTCACCGCACCTTTACCGCGTGTCAGCCATTCCGGGTAGAACGCGGCAATAACTGCGGTATCAACCTTATAAACCTGCTCAACAAAGTCGCTCAGTTTGTCGATGAAAGACTTGATGTACATCAGGCGCTCAAGGTTCAGCa < 1:743702/149‑1 (MQ=255) aGGGAGTTCACCGCACCTGTACCGCGTGTCAGCCATTCCGGGTAGAACGCGGCAATAACTGCGGTATCAACCTTATAAACCTGCTCAACAAAGTCGCTCAGTTTGTCGATGAAAGACTTGATGTACATCAGGCGCTCAAGGTTCAGCAc < 1:151566/149‑1 (MQ=255) gTAGTTCACCGCACCTTTACCGCGTGTCAGCCATTCCGGGTAGAACGCGGCAATAACTGCGGTATCAACCTTATAAACCTGCTCAACAAAGTCGCTCAGTTTGCCGATGAACGCCTTGATGTACATCAGGCGCTCAAGGTTCAGCACGc < 2:1035918/149‑1 (MQ=255) aCCGCACCTTTACCGCGTGTCAGCCATTCCGGGTAGAACGCGGCAATAACTGCGGTATCAACCTTCTAAACCTGCTCAACAAAGTCGCCCAGTTTGTCGATGAAAGACTTGAGGTACATCAGGCGCTCACGGTTCACCCCGcccgaccc > 2:1151201/1‑144 (MQ=255) | CTGAATGCCTTTGATCAGGTATTCATCGGAATGAGAAGTGATCGGACGATACGAGGACAGATCCGCATTCTCAATGTAGCCGCCCGGGAACAGGAAGCTGCCGTTTTTACTGTCGGTCGGGAATTCCGGCACGCTCAGGTAGTTCACCGCACCTTTACCGCGTGTCAGCCATTCCGGGTAGAACGCGGCAATAACTGCGGTATCAACCTTATAAACCTGCTCAACAAAGTCGCTCAGTTTGTCGATGAAAGACTTGATGTACATCAGGCGCTCAAGGTTCAGCACGCCCAAACC > CP009273/3135365‑3135658 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |