Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC CP009273 2,160,620 IS5 (+) +4 bp 18.0% intergenic (+110/+160) yegQ → / ← ogrK putative peptidase/positive regulator of P2 growth (insertion of P2 ogr gene into the chromosome)

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 2095230 =NA (NA)7 (0.100) 6/276 NT 14.2% noncoding (1195/1195 nt) IS5 repeat region
?CP009273 2160620 = 41 (0.600)intergenic (+110/+163) yegQ/ogrK putative peptidase/positive regulator of P2 growth (insertion of P2 ogr gene into the chromosome)
* ? CP009273 = 2096424NA (NA)11 (0.160) 10/276 NT 20.7% noncoding (1/1195 nt) IS5 repeat region
?CP009273 = 2160623 41 (0.600)intergenic (+113/+160) yegQ/ogrK putative peptidase/positive regulator of P2 growth (insertion of P2 ogr gene into the chromosome)

GCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/2095351‑2095230
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTACGCGTAATACAATGAAATAAAAGGATTTATTTCTGGTCACGTCCACACATTGACCACATCGACAAAAAAGCCCCTCGACTGAG  >  CP009273/2160620‑2160765
                                                                                                                                                                                                                                                                            
GCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCTGTACCAGGAACCACCTCCTTA                                                                                                                         <  1:390737/149‑1
      AAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCTGTACCAGGAACCACCTCCTTAGCCTGT                                                                                                                   <  1:1199602/149‑1
                                             AAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACAGGCTTATTTTTTCCGCCTAATA                                                                            >  2:168510/1‑149
                                                aacTCGGCCCAAACAAGAAGAGATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTAATTCGCACCTTCCCTAGCTGTACCAGGAACCACCTCCTTAAACTGTGTAAATTCACAAACACGGGCTTATTTTTTACGCGTAATACAA                                                                         >  2:566081/4‑149
                                                           agCATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTGTTCGCACCTTCCCTAGCCGTACCCGGAACCACCTCCGTATCCTGTGTTATCTCCCTTACACGGGCTTATTTTTTCCGCGTAATACAATGAAATAAAAG                                                              <  2:433504/147‑1
                                                                                                    TCCCCGCTTATTCGCACCTTCCCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTAACTCGTAATACAATGAACTAAAAGGATTTATTTCTGGTCACGTCCACACATTGACCACATCGACA                     <  1:848098/149‑1
                                                                                                                  CACCTTCCCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTACGCGTAATACAATGAAATAAAAGGATTTATTTCTGGTCACGTCCACACATTAACCCCATGGACAAAACAGCCTCTCGA       >  2:927106/1‑149
                                                                                                                       agCCTAGCTCTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACCCCCGCTTCTATTTAACGCGTAATACAATGAAATAAAAGTATTTATTTCTGGTCACGTCCACACATTGACCACATCGACAAAAAAGCCCCTCGACTGAG  <  1:596777/147‑1
                                                                                                                                                                                                                                                                            
GCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/2095351‑2095230
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTACGCGTAATACAATGAAATAAAAGGATTTATTTCTGGTCACGTCCACACATTGACCACATCGACAAAAAAGCCCCTCGACTGAG  >  CP009273/2160620‑2160765

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.