New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	1843546 =	51 (0.730)	3 (0.050)	3/260	NT	5.4%	coding (453/1857 nt)	sppA	protease IV (signal peptide peptidase)
	?	CP009273	1843584 =	57 (0.870)					coding (491/1857 nt)	sppA	protease IV (signal peptide peptidase)

CACTATTCGCCAGGCGAAGGACGACCGCAATATCACCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAGGCGTGGTTGATCTGCACGGCTTTGCCACCAACGGTCTGTACTACAAATCGTTGCTGGATAAGCTGAAAGTTTCCACC  >  CP009273/1843399‑1843693                                                                                                                                                    |                                                                                                                                                    cacTATTCGCCAGGCGAAGGACGACCGCAATATCACCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTg                                                                                                                                                    >  1:800059/1‑149 (MQ=255)  ccTATTCGCCAGGCGAAGGACGACCGCAATATCACCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTgg                                                                                                                                                   <  1:1088006/148‑1 (MQ=255)  acTATTCCCCAGGCGAAGGACGACCGCAATATCACCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTgg                                                                                                                                                   <  2:542947/149‑1 (MQ=255)    tATTCGCCAGGCGAAGGACGACCGCAATATCACCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCg                                                                                                                                                 <  1:917745/149‑1 (MQ=255)     ggcagatttatccgtacccacgcggaacacatgggtggaaactttcagcttatccagcaacgatttgtagtacagaccgttggtggcaaagccgtgcagatcaaccacgccttgcggagacagccaaattttattggcgaaacTGGCga                                                                                                                                                <  2:762231‑M1/6‑1 (MQ=255)     aTTCGCCAGGCGAAGGACGACCGCACTATCACCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACAGCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCga                                                                                                                                                <  2:726501/149‑1 (MQ=255)     aTTCGCCAGGCGAAGGACGACCGCAATATCACCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCga                                                                                                                                                <  2:427875/149‑1 (MQ=255)      gcagatttatacgtacccacgcggaacacatgggtggaaactttcagcttatccagtaacgatttgtagtacagaccgttggtggcaaagccgtgcagatcaaccacgccttgcggagacagccaaattttattggcgaaacTGGCgag                                                                                                                                               <  2:777387‑M1/7‑1 (MQ=255)        cGCCAGGCGAAGGATGAGCGCAATATCACCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGaa                                                                                                                                             <  1:522918/149‑1 (MQ=255)        cGCCAGGCGAAGGACGACCGCAATATCACCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGaa                                                                                                                                             <  1:520962/149‑1 (MQ=255)         gCCAGGCGCAGGACGACCGCAATATCACCGGTATTGTGATGGATCTGAAAAACTGCGCAGGCGGCGACCAACCGCCTATGCAGTACATCGGCAAAGCTCTGAAAGCGTTTCGTCACAGCAGGGAACCGGCGTATGGCGGTGGCGAGAAc                                                                                                                                            >  2:1028838/1‑149 (MQ=255)         gCCAGGCGAAGGACGATCGCAATATCACCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGAAc                                                                                                                                            >  1:787092/1‑149 (MQ=255)            ttatacgtacccacgcggaacacatggggggaaactttcagcttatccagcaacgaattgtagtacagaccgttggtggcacagccgcgcagatcaaccacgccttgcggagacagccaaatgttattggcgcaactggcgagcgaata                                                                                                                                         <  2:1083650‑M1/13‑7 (MQ=255)            aGGCGAAGGACGACCGCAATATCACCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGAACAACCGTCTATGCTGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGAACTAc                                                                                                                                         <  2:135904/149‑1 (MQ=255)                gAAGGACGACCGCAATATCACCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGCTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGAGCTACAGcc                                                                                                                                     >  2:209084/1‑149 (MQ=255)                   ggACGACCGCAATATCACCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTACGTGACAGCGGGAAACCGGGTTATGCCGTTGGCGAGAACTAAAGCCAgg                                                                                                                                  >  2:567352/1‑149 (MQ=255)                    gacgacCGCAATATCACCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGAACTACAGCCAggg                                                                                                                                 <  2:380352/149‑1 (MQ=255)                          cGCAATATCACCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAata                                                                                                                           >  2:1103625/1‑149 (MQ=255)                                   atgggtggaaactttcagcttatccagcaacgatttgtagtacagaccgttggtggcaaagccgtgcagatcaaccacgccttgcggagacagccaaattttattggcgaaacTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGc                                                                                                                  >  2:218335‑M1/114‑149 (MQ=255)                                     gggtggaaactttcagcttatccagcaacgatttgtagtacagaccgttggtggcaaagccgtgcagatcaaccacgccttgcggagacagccaaattttattggcgaaacTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCa                                                                                                                >  2:161395‑M1/112‑149 (MQ=255)                                      tgTATTGTGATGGATCGGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCaa                                                                                                               <  2:237896/148‑2 (MQ=255)                                            gtgaggggtcgtaaaagCTTCGCAGGCGGCGGCCATCCGTCTATGCAGTACGTCGGCAAGGCTCTGAAAGAGTTTCGTGACAGCGGGAACCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGc                                                                                                         <  2:33157/137‑1 (MQ=255)                                            gtgATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGc                                                                                                         >  2:371071/1‑149 (MQ=255)                                                    tCTGAAAAACTTCGCAGGCGGCGCCCCACCGTCTAGGGCGTACCTCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATaaaa                                                                                                 <  1:140315/149‑1 (MQ=255)                                                        atccagcaacgatttgtagtacagaccgttggtggcaaagccgtgcagatcaaccacgccttgcggagacagccaaattttattggcgaaacTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTg                                                                                             >  2:539921‑M1/93‑149 (MQ=255)                                                         aaaaCTTCGCGGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTgg                                                                                            <  1:742238/149‑1 (MQ=255)                                                         aaaaCTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTgg                                                                                            >  2:966023/1‑149 (MQ=255)                                                          aaaCTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGc                                                                                           >  1:384358/1‑149 (MQ=255)                                                              ttCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAGAGCTCTGAAAGAGTTTCGTGACAACGGTTAACCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGtc                                                                                       >  1:847964/1‑149 (MQ=255)                                                              ttCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAAAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGtc                                                                                       >  2:1141524/1‑149 (MQ=255)                                                                   aGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAAATTGGCTGTCTCCGc                                                                                  >  1:964316/1‑149 (MQ=255)                                                                    ggcggcGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCa                                                                                 >  1:132225/1‑149 (MQ=255)                                                                     gcggcgACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAACCAGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGTCAATAAAATTTGGCTGTCTCCGCaa                                                                                >  1:762231/1‑149 (MQ=255)                                                                             cAACCGTTTATCAAGTACATCGGCAAAGCGCTGAAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGATCCACAGCCAGGGGCAATATTACCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAGGCGTGGt                                                                        <  2:552148/149‑1 (MQ=255)                                                                             cAACCGTCTATGCAGTACATCGGCAAAGCTCTGCAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAGGCGTGGt                                                                        <  2:174290/149‑1 (MQ=255)                                                                                 ggTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAGGCGTGGTTGAt                                                                    <  1:125648/148‑1 (MQ=255)                                                                                  gTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAGGCGTGGTTGCTc                                                                   >  1:1087443/1‑149 (MQ=255)                                                                                   tCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGCGAACTACAGCAAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCGCCGCAAGGCGTGGTTGATCt                                                                  >  2:239013/1‑149 (MQ=255)                                                                                      aTGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCCATAAAATTTGGCTGTCTCCGCAAGGCGTGGTTGATCTGCa                                                               >  1:495239/1‑149 (MQ=255)                                                                                           gTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAGGCGTGGTTGATCTGCACGGCt                                                          >  1:752354/1‑149 (MQ=255)                                                                                           gTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCGGTCTCCGCAAGGCGTGGTTGATCTGCACGGCt                                                          >  1:168312/1‑149 (MQ=255)                                                                                                tCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGAACTACCGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCAGCAAGGCGTGGTTGATCTGCACAGAGTTGcc                                                     >  1:311497/1‑149 (MQ=255)                                                                                                   gCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGAACAACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAGGCGTGGTTGATCTGCACGGCTTTGccacc                                                  >  1:823932/1‑149 (MQ=255)                                                                                                             gAAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCCATAAAATTTGGCTGTCTCCGCAAGGCGTGGTTGATCTGCACGGCTTTGCCACCAAcggtcggt                                        >  2:1087826/1‑149 (MQ=255)                                                                                                              aaaGACGTTCGGGACGGCGGGCGCTCGGTGTACGCCGCTGGCGAGACCTACAGCCCGGGGCAATCTTATCTCGCCAGTTCCGCCACTTAAATTTGGTCGTCTCCGCAAGGCGTGGTTGATCTGCACGGCTTTGCCACCAACGGTCTGta                                       <  2:959450/149‑1 (MQ=255)                                                                                                               aaGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCGAGGTTCGCCAATAGGGTGGGGCGGGCTCCGCTAGGCGTGGGTGATCTGCACGGGTTGGccaccaggcggcgttac                                      >  1:871329/1‑138 (MQ=255)                                                                                                                agagTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAGGCGTGGTTGATCTGCCCGGCTTTGCCACCCACGGTCCGtact                                     >  2:596518/1‑149 (MQ=255)                                                                                                                     ttCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAGGCGTGGTTGATCTGCACGGCTTTGCCACCAACGGTCTGTACTACaaa                                >  1:719774/1‑149 (MQ=255)                                                                                                                     ttCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAGGCGTGGTTGATCTGCACGGCTTTGCCACCAACGGTCTGTACTACaaa                                >  1:74397/1‑149 (MQ=255)                                                                                                                      tCGTGACAGCGGGAAACCGGTTTATGCCGTTGTCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAGGCGTGGTTGATCTGCACGGCTTTGCCACCAACGGGCTGTACTACAAAt                               <  1:844591/149‑1 (MQ=255)                                                                                                                        gTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAGGCGTGGGTGATCTGCACGGCTTTGCCACCAACGGTCTGTACGACAAATCg                             >  2:225667/1‑149 (MQ=255)                                                                                                                           aCAGCGGGAAACCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAGGCGTGGTTGATCTGCACGGCTTTGCCACCAACGGTCTGTACTACAAATCGTTg                          <  2:977235/149‑1 (MQ=255)                                                                                                                             aGCGGGAAACCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAGGCGTGGTTGATCTGCACGGCTTTGCCCCCAACGCTCTGTCCTCCAAATCGTTGCt                        >  2:69653/1‑149 (MQ=255)                                                                                                                              gagagagactggTTTATGCCTGTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAGGCGTGGTTGATCTGCACGGCTTTGCCACCAACGGTCTGTACTACAAATCGTTGCTg                       <  2:187925/139‑1 (MQ=255)                                                                                                                              gCGGGAAAGCGGTGTATGCCGTTCGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCAAATAAAATTTGGCTGTCTCCGCAAGGCGTGGTTGATCTGCACGGCTTTGCCACCAACGGTCTGTACTACAAATCGTTGCTg                       <  2:617117/149‑1 (MQ=255)                                                                                                                              gCGGGAAACCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAGGCGTGGTTGATCTGCACGGCTTTGCCACCAACGGTCTGTACTACAAATCGTTGCTg                       <  1:1141524/149‑1 (MQ=255)                                                                                                                                gggAAACCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAGGCGTGGTTGATCTGCACGGCTTTTCCACCAACGGTCTGTACTACAAATGGTTGCTGGa                     >  1:373600/1‑149 (MQ=255)                                                                                                                                     aCCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAGGCGTGGTTGATCTGCACGGCTTTGCCACCAACGGTCTGTACTACAAATCGTTGCTGGATAAGc                <  2:384358/149‑1 (MQ=255)                                                                                                                                      ccGGTTTATGGCGTTGGGGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCGAATAAAATTTGGCTGTCTCCGCAAGGCGTGGTTGAGCTGCACGGCTTTGCCACCAACGGGCTGTACTACATATCGTTGCTGGATAAGCt               >  2:917270/1‑149 (MQ=255)                                                                                                                                       cGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAGGCGTGGTTGATCTGCACGGCTTTGCCACCAACGGTCTGTACTACAAATCGTTGCTGGATAAGCTg              <  2:132225/149‑1 (MQ=255)                                                                                                                                        ggTTTATGCCGTTGGCAAGAACTACAGCCTGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAGGCGTGGTTGATCTGCACGGCTTTGCCACCAACGGTCTGTACTACAAATCGTTGCTGGATAAGCTGa             >  1:777387/1‑149 (MQ=255)                                                                                                                                               gCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAGGCGTGGTTGATCTGCACGGCTTTGCCACCAACGGTCTGTACTACAAATCGTTGCTGGATAAGCTGAAAGTTTc      <  1:399537/149‑1 (MQ=255)                                                                                                                                                   ttGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAGGCGTGGTTGATCTGCACGGCTTTGCCACCAACGGTCTGTACTACAAATCGTTGCTGGATAAGCTGAAAGTTTCCAcc  >  1:1176488/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                    CACTATTCGCCAGGCGAAGGACGACCGCAATATCACCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAGGCGTGGTTGATCTGCACGGCTTTGCCACCAACGGTCTGTACTACAAATCGTTGCTGGATAAGCTGAAAGTTTCCACC  >  CP009273/1843399‑1843693

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.