New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	2420388 =	58 (0.830)	8 (0.110)	6/276	NT	12.1%	intergenic (‑121/+100)	hisJ/argT	histidine/lysine/arginine/ornithine transporter subunit/lysine/arginine/ornithine transporter subunit
	?	CP009273	= 3577555	NA (NA)					intergenic (+15/‑1)	insB1/yrhA	IS1 transposase B/pseudogene, interrupted by IS1E

AGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGTAGACATTAAAGTCGAAATACTTTTTCGC  >  CP009273/2420241‑2420526                                                                                                                                                    |                                                                                                                                           agagagCGATAGCACCAGTTTTTTGATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAGAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTaa                                                                                                                                           >  1:916329/1‑149 (MQ=255) agagagCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTaa                                                                                                                                           >  1:1203892/1‑149 (MQ=255)  ttgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactaccaataagttggagtcattaccacc                                                                                                                                          <  2:373787‑M1/3‑3 (MQ=255)  gagagCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATTGTGAATATTTACAGGTTTGTTACACTGATCGTGCCATAAAATTGAACATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTaaa                                                                                                                                          <  1:49588/149‑1 (MQ=255)   agagCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTaaaa                                                                                                                                         >  2:1113098/1‑149 (MQ=255)        gATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAAAATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGAAACATATACCGCCCCGCTAGAGGTATTATTTTTAATACAAAATgag                                                                                                                                    >  2:590179/1‑147 (MQ=255)              aCCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAgaa                                                                                                                              >  1:1232716/1‑147 (MQ=255)                ctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAAAGATGCTTAAGTATg                                                                                                                            <  1:150234‑M1/17‑1 (MQ=255)                ctgaatctgaggcagcacctggcacggctggacggggagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAAAAATGCTTAAGTATg                                                                                                                            <  1:300222‑M1/17‑1 (MQ=255)                   ttttttCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTCTGCAt                                                                                                                         >  1:331878/1‑149 (MQ=255)                     ttttCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCAttt                                                                                                                       <  2:1160195/149‑1 (MQ=255)                     ttttCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCAttt                                                                                                                       <  2:75068/149‑1 (MQ=255)                     ttttCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAATTATGCAttt                                                                                                                       >  1:489090/1‑149 (MQ=255)                                 cctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAAAAATGCTTAAGTATGCATTTCAATGCACCACg                                                                                                           >  1:824706‑M1/116‑149 (MQ=255)                                  cTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGATTGATACACTTCTCGTGAAATAAAATTTACCATCAAGTCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTGAAACTGCTTAATTATGTAtttgagtgtcgtcgag                                                                                                          >  2:159882/1‑136 (MQ=255)                                   tCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGAAGTATTATTGTGCATTAAGAATGCTTAAGTATGAATTTCAATCCACCACGAt                                                                                                         >  1:231573/1‑149 (MQ=255)                                      aCTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGt                                                                                                      <  1:1174181/149‑1 (MQ=255)                                      aCTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGt                                                                                                      <  1:1149905/149‑1 (MQ=255)                                       cTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCAGAAAATGGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCATTGCACCACGATAGTg                                                                                                     >  2:932801/1‑149 (MQ=255)                                          aCAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGAATTTCAATGCACCACGATAGTGcaa                                                                                                  <  2:990166/149‑1 (MQ=255)                                            aGTCTTTTTGTAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatg                                                                                                <  2:360061‑M1/149‑37 (MQ=255)                                            aGTCTTTTTGTAGGGAATATTTACAGGTTTGTTACACTTATCGGGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatg                                                                                                <  2:65961‑M1/149‑37 (MQ=255)                                            aGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatg                                                                                                >  1:171815‑M1/1‑113 (MQ=255)                                              tCTTTTTATAGGGAATATTTACCGTTTTGCTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACaaa                                                                                              <  1:895661/149‑1 (MQ=255)                                               cTTTCTATTGGAAATATTTACAGGTTTGTTATACTTTTCGTGCCATAAAATAGACCATCAAGGCAAAATATCCCGCCCAGTTATATCTATTATGTTTCTTTAAAAATACTTTAGTATGCATTTCACTCCTCCACGATAGTGcaacaatc                                                                                             <  2:1006401/149‑3 (MQ=255)                                                 ttttATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCt                                                                                           >  1:392827/1‑149 (MQ=255)                                                 ttttATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCt                                                                                           >  1:715808/1‑149 (MQ=255)                                                        gggAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGATAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGCTAGTGCAACAAACCTGGCGTGc                                                                                    >  1:364750/1‑149 (MQ=255)                                                         agAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTCAGGCGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACACACCTGGCGTGCa                                                                                   >  2:636590/2‑149 (MQ=255)                                                           aaTATTTACAGGTTTGTTACACTTTTCGTGCTATAAAATTGAACATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCAcc                                                                                 <  1:28363/149‑1 (MQ=255)                                                           aaTATTTACAGGTTTGTTACACTTATCGTGCCTTAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAGCCTGGCGTGCAcc                                                                                 <  1:845874/149‑1 (MQ=255)                                                                ttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCatgat                                                                            <  2:131367‑M1/65‑1 (MQ=255)                                                                ttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCatgat                                                                            >  2:1166730‑M1/85‑149 (MQ=255)                                                                   cAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTTATAATGCTTAAGTATGCATTTCAATGCACCACGATACTGCAACAAACCTGGCGTGCACCAtgatgac                                                                         >  2:840906/1‑148 (MQ=255)                                                                      gTTTGTTACACTTTTCCTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCAt                                                                      <  2:208226/149‑1 (MQ=255)                                                                      gTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCAt                                                                      <  2:579018/149‑1 (MQ=255)                                                                       tctGTTACACTCATCGTGCCATAAAATTGACCATCAAGCCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATTCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCAtt                                                                     <  1:169104/147‑1 (MQ=255)                                                                         tGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctg                                                                   <  1:73562‑M1/149‑66 (MQ=255)                                                                           ttACACTTATCGTGCCATAAAATTGACCCTCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTCTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGAGCATTCCAt                                                                 >  1:746276/1‑149 (MQ=255)                                                                            tACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGAAGTATTATTTTTCATTAAAACTGCTTAAGTATGCATTGCAATGCACCACGATATTGCAACAAACCTGGAGTCCACCATGATCATCATTCCATc                                                                >  1:469856/1‑149 (MQ=255)                                                                             acacTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCa                                                               <  2:392827/149‑1 (MQ=255)                                                                               acTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAgg                                                             <  2:1018311/149‑1 (MQ=255)                                                                                 tcttcggggcATAAAATTGACCTGCAGGGCAAAATTTCCCGCCCCGTTACACGTATTATTTTTCATTATAAATGCTTAAGTATGCATTTCAGTGCACCACGATAGTGCAACAGACCTGGCGTGCACCATGATGATCATTCCATCAGGTa                                                           <  2:671760/140‑1 (MQ=255)                                                                                  tATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCAATCCGGtcc                                                          >  2:740118/1‑147 (MQ=255)                                                                                       tgacaaagtcatcgggcattatctgaacataaaacactatcaataggttggagtcattaccAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCtt                                                     >  2:1213708‑M1/62‑149 (MQ=255)                                                                                       tGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCtt                                                     <  1:436587/149‑1 (MQ=255)                                                                                           aTAAAATTGACCATCAAGGCTAAATATCCCGCCTCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACTTCGATAGTGCAACAATCCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCa                                                 <  1:1017961/149‑1 (MQ=255)                                                                                            tAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGGAACAAAACTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTcccca                                                >  2:663161/1‑147 (MQ=255)                                                                                            tAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTTCAGCTTCCCAg                                                >  2:117890/1‑149 (MQ=255)                                                                                              aaaTTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcct                                              <  2:153764‑M1/149‑87 (MQ=255)                                                                                                aTTGACCATCACGGCAAAATAGCCCGCCCCGTTAGACGTATTATTTTTCTTTAAAAATGCTTCAGTATGCATTTCAATGCACCACGATAGTGCAACATACCTGGCGTGCACCATGATGATCATTCTATCAGGTACAGCTTCCCAGCGAc                                            <  2:849726/149‑1 (MQ=255)                                                                                                   gACCATCAAGCCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTa                                         <  1:305548/149‑1 (MQ=255)                                                                                                      cATCAAGGCAAAATATCCCGCCCTGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCa                                      <  1:430098/149‑1 (MQ=255)                                                                                                       aTCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAACTGGGTAAGGATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAg                                     >  1:967900/1‑149 (MQ=255)                                                                                                       aTCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAg                                     <  2:1130254/149‑1 (MQ=255)                                                                                                          aaGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCa                                  <  1:786130/149‑1 (MQ=255)                                                                                                              cAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGt                              >  2:98530/1‑149 (MQ=255)                                                                                                               aaaaTATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAGTGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTACCAGCGACGTATCAGTCACCGTa                             >  1:207164/1‑149 (MQ=255)                                                                                                               aaaaTATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGCTAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGTa                             >  1:977565/1‑149 (MQ=255)                                                                                                               aaaaTATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACgactaggtcacggtg                             >  2:1162986/1‑135 (MQ=255)                                                                                                                 aaTATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCTTTTCAATGCACCACGATAGTGCAACAAACCTGGCGAGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGATGTATCAGTCACCGTAGa                           <  2:916329/149‑1 (MQ=255)                                                                                                                 aaTATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTAACCATAGa                           >  1:421709/1‑149 (MQ=255)                                                                                                                      cccGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCCGCGACGTATCAGTCCCCGTAGACATTa                      >  2:1169228/1‑149 (MQ=255)                                                                                                                       ccGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGTAGACATTaa                     >  2:1063960/1‑149 (MQ=255)                                                                                                                            ccGTTAGGCGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacg                <  2:1045746‑M1/149‑117 (MQ=255)                                                                                                                            ccGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacg                <  2:802048‑M1/149‑117 (MQ=255)                                                                                                                            acgTTTGACCTATTTTTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacg                <  2:331512‑M1/148‑117 (MQ=255)                                                                                                                              gTTAGCTGTATTTTTCTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAAACTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGCATCAGTGACCGTGAACATTAATATCGaa              >  2:213176/1‑149 (MQ=255)                                                                                                                              gTTAGACGTCTTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGCGAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCGCGAACCGTAGACATTAAGGTCgta              >  2:595064/1‑147 (MQ=255)                                                                                                                                 ataagttggagtcattaccAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGTAGACATTAAAGTCGAAATa           <  2:954566‑M1/130‑1 (MQ=255)                                                                                                                                 ataagttggagtcattaccAAAAATCCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGTAGACATTAAAGTCGAAATa           <  1:641850‑M1/130‑1 (MQ=255)                                                                                                                                 aGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGTAGACATTAAAGTCGAAAtc           <  2:331878/149‑2 (MQ=255)                                                                                                                                   aCGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTGCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGAGCATTCCATCCGGTCCAGCTTCCCAGCGACGTATCAGTCACGGTCGGCATTAAAGTCGACATACt         >  1:268045/1‑149 (MQ=255)                                                                                                                                      tattatTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGTAGACATTAAAGTCGAAATACtttt      >  1:654303/1‑149 (MQ=255)                                                                                                                                        ttattTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGTAGACATTAATGTCAAAATACttttta    >  1:149445/1‑148 (MQ=255)                                                                                                                                        ttattTTTCATTAAAAATGCTTAAGGATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGTAGACATTAAAGTCGAAATACTTTTTc    >  1:639419/1‑149 (MQ=255)                                                                                                                                        ttattTTCCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACACACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGTAGACATTAAAGTCGAAATACTTTTTc    <  2:1157868/149‑1 (MQ=255)                                                                                                                                         tattTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGTAGACATTAAAGTCGAAATACTTTTTCg   >  2:1035477/1‑149 (MQ=255)                                                                                                                                          attTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGTAGACATTAAAGTCGAAATACTTTTTCGc  <  1:876312/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                           AGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGTAGACATTAAAGTCGAAATACTTTTTCGC  >  CP009273/2420241‑2420526

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.