| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 360280 | 88 (1.260) | 65 (1.030) | 5/250 | NT | 59.7% | intergenic (‑214/+381) | lacZ/lacI | pseudogene, truncated/DNA‑binding transcriptional repressor |
| ? | CP009273 | = 3940171 | 8 (0.130) | noncoding (112/120 nt) | rrfC | 5S ribosomal RNA of rrnC operon | |||||
CAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGTAAGCCGGTCATAAAACCGGTGGTTGTAAAAGAATTCGGTGGAGCGGTAGTTCAGTCGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACCCTAATTAG > CP009273/3940027‑3940318 | cAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGGGTAGGGAACTGcgag < 1:1074555‑M2/149‑5 (MQ=255) aGACCGCAGAAGCGGGCGGATGAAACAGAATTCGCCGGGCGGCCGTAGCGCGGTGGCCCCACCTGACCCCATGCCGAACTCAGAAGTGAAGCGCCGTAGCGTCGATGGTAGTGTGGGGTTTCCCCATGCGAGAGTAGGGAACTGccagg > 1:661619‑M2/1‑144 (MQ=255) aGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGCCTCCCCATGCGAGAGTAGGGAACTGccagg < 1:982382‑M2/149‑6 (MQ=255) agagggggTCTGATGAAACAGAATCTGCCGGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGCTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCaaa < 2:302353/143‑1 (MQ=11) aGAAGCGGTCTGGTGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAAATCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGccgggactacaa < 1:892498‑M2/149‑13 (MQ=255) gAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGccaggcatcaaat < 1:942103‑M2/149‑14 (MQ=255) aaGCGGTCTGAGGAAACAGAATGTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAAtt < 2:1118475/149‑1 (MQ=17) ccgTCTGACGAAACAGAATTTGCCTGGCGGCCGTACCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAg < 2:320551/147‑1 (MQ=12) cGGTCGGATGAAGGAGAAGGTGGCGGGGGGCGGTAGCGCGGGGGGCCCACCTGACCCCATGGGGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAg < 1:27557/149‑1 (MQ=11) ggTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGc < 1:772287/149‑1 (MQ=32) gTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCa > 2:491864/1‑149 (MQ=32) tCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATCCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGCCTCCCAATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAg > 2:401848/1‑149 (MQ=12) cgatgaAACAGAACTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGTa < 1:521133/148‑1 (MQ=17) gatgaAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGGAGGGAACTGCCAGGCATCAAATTAAGCAGTaa > 2:1209943/1‑149 (MQ=17) gaAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTCGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGTAAGcc > 2:48726/1‑149 (MQ=11) aaCAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGccaggcatcaaataaaacgaaaggctca > 1:1107572‑M2/1‑121 (MQ=255) aaCAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGccagacatcaaataaaacaaaaggctca > 2:633869‑M2/1‑121 (MQ=255) aaCAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGccagacatcaaataa < 1:518185‑M2/136‑16 (MQ=255) aaCAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGccagacatcaaataa > 2:518185‑M2/1‑121 (MQ=255) cAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGCAGGGAACTGccagacatcaaataaagcgacaggctatgg < 2:801746‑M2/149‑31 (MQ=255) aaTTTGTCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGccag > 2:337743‑M2/1‑116 (MQ=255) aaTTTGTCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGccag < 1:337743‑M2/120‑5 (MQ=255) aggagcgCGGTGGTCACACCTGCCCCCATGCCGAACTCAGAAGTGGTACGACGTATCTCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGCGAACTGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttc > 1:235465‑M2/4‑101 (MQ=255) gTAGCGCGGTGGGCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcg > 1:69122‑M2/1‑100 (MQ=255) tAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgt < 1:397156‑M2/149‑51 (MQ=255) tAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgt < 1:433900‑M2/149‑51 (MQ=255) aGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgtt > 1:466770‑M2/1‑98 (MQ=255) gcgcgcGGGGCCCACCTGACCCCATGCCGAACCCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttt > 1:895414‑M2/1‑97 (MQ=255) cccACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgt > 1:121598‑M2/1‑87 (MQ=255) cccACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgt < 2:172263‑M2/149‑63 (MQ=255) ccACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCAGGCGAGAGTAGGGAACTGccaggcatcaaataaaacgaaaggcccagtcgaaagactgggcctttcgttttatctgttgtt < 2:441671‑M2/149‑64 (MQ=255) aCCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttg < 2:358919‑M2/149‑66 (MQ=255) ccTGCCCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgt > 2:714985‑M2/1‑83 (MQ=255) cTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGAGTCTCCCCATGCGAGAGTAGGGAACTGccaggcatcaaataaaacgaaaggcgcagtcgaaagactgggcctttagttttatctgttgtgtgac < 2:958439‑M2/149‑68 (MQ=255) tGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcg < 2:1184357‑M2/149‑69 (MQ=255) ccccATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtg > 2:1002846‑M2/1‑78 (MQ=255) cccATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtga > 1:1184357‑M2/1‑77 (MQ=255) cccATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttagatttatctgttgtttgtcggtga < 1:244176‑M2/149‑73 (MQ=255) cccATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGGAGGGAACTGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtga < 1:1014158‑M2/149‑73 (MQ=255) ccATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGGGCACGGAACTGccagtcatcaaataaaactaaagcctcactcgaaagactgggcgtttcgttttatctgttgtttggcggtgaa < 2:1220245‑M2/149‑74 (MQ=255) aTGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttctctgttgtttgtcggtgaacg < 1:191425‑M2/149‑76 (MQ=255) tCAGGAGTGAAACGCCGTAGCGCCGATGGTAGTGGGGGGTCTCCCCATGCGAGAGTAGGGAACTGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctga > 1:501434‑M2/1‑65 (MQ=255) tCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGccaggcatcaaataaaacgaaaggctcagtcgagagactgggcctttcgttttatctgttgtttgtcggtgaaagctctcctta < 2:982506‑M2/149‑85 (MQ=255) ccaGAAGTGAACCGCCGGAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTGGGGAACTGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctga > 2:195589‑M2/2‑65 (MQ=255) aGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctgcgt < 1:1126573‑M2/149‑87 (MQ=255) aGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctgagt < 1:1198073‑M2/149‑87 (MQ=255) aGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGccaggcatcaaataaaacgaaaggctcagccgaaagactgggcctttcgttttacctgttgtttgtcggtgaacgctctcctgcgg < 1:946894‑M2/149‑87 (MQ=255) gAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctgagta < 2:785474‑M2/149‑88 (MQ=255) aaGTGAAGCGCCGGAGCGGCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctgagtag > 1:555098‑M2/1‑61 (MQ=255) aGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgagcgctccgctgagtagg > 2:1072115‑M2/1‑60 (MQ=255) gTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctgagtagga < 1:267852‑M2/149‑91 (MQ=255) gTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGacaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttctatctgttgtttgtcggtgaaggccctcctgagtagga < 2:1060769‑M2/149‑91 (MQ=255) tGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGAGAGAGTAGGGAACTGccaggcatcaaataaaacgaaaggctcagtcgaaaggctgggcctttcgttttttctgttgtttgtcggtgaacgctctcctgcgacgagc < 2:60999‑M2/149‑92 (MQ=255) aaCGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGccgggcatcaaataaagcgaaaggctcagtcgaaggactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaa < 1:998120‑M2/149‑95 (MQ=255) aaCGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGcaaggaatcacataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctcttctgagtcggacaaa < 2:600360‑M2/149‑95 (MQ=255) aaCGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACAGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaa < 2:667331‑M2/149‑95 (MQ=255) gcgcCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGccaggcaacaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccggg < 1:41417‑M2/149‑104 (MQ=255) gcCGGTGGTAGTGTGGGGGCTCCCCATGCGAGAGTAGGGAACTGccaggcatcaactaaaacgaaaggctcagtcgaaagactgggcctttcggtttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgggag > 2:1148026‑M2/1‑44 (MQ=255) cgtggTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGccaggcagcaaacaaaacgaaaggctcagtcgaaagactgggcctgtcgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgggagcgg > 1:72708‑M2/3‑41 (MQ=255) aTGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgggagcgga > 1:318078‑M2/1‑40 (MQ=255) ggagtGGGGGTGCGCCGCAGGCGAGGGTAGGGAAGTGgcaggcatcaaataaaacgaagggctcagtcggaagactgggccttgcgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgggagcggattt > 2:85846‑M2/3‑37 (MQ=255) gTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcagtcgacgctctcctgagtaggacaaatccgccgggagcggattt < 1:39417‑M2/149‑113 (MQ=255) tAGTGTGGGGTCCCCCCATGCGAGGGTAGGGAACAGccaggcatcaaatacaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgggagcggatttg > 2:475376‑M2/1‑36 (MQ=255) tgtgGGGTCTCCCCATGCGAGAGTAGGGAACTGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgggagcggatttgaac < 1:68047‑M2/149‑117 (MQ=255) tgtgGGGTCTCCCCATGCGAGAGTAGGGAACTGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgcactcctgagaaggcaaaatccgccgggaggggctttgaac < 1:199257‑M2/149‑117 (MQ=255) tgtgGGGTCTCCCCATACGAGAGTAGGGAACTGgcaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgggagcggatttgaac < 1:790583‑M2/149‑117 (MQ=255) tgGGGTCTCCCCATGCGAGAGTAGGGAACTGccag < 2:51090‑M2/35‑5 (MQ=255) tgGGGTCTCCCCATGCGAGAGTAGGGAACTGccag > 1:51090‑M2/1‑31 (MQ=255) ctcCCCATGCGAGAGTAGGGAACTGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgggagcggatttgaacgttgcgaa > 1:769972‑M2/1‑25 (MQ=255) tcCCCATGCGAGAGTAGGGAACTGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgggagcggctttgaacgttgcgaag < 2:224290‑M2/149‑126 (MQ=255) ccccATGCGAGAGTAGGGAACTGccaggcatcaaataaaacgaaaggctcagtagaatgacttggcctttcgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgggcgcggatttgaacgttgcgaagc < 1:41166‑M2/149‑127 (MQ=255) cccATGCGAGAGTAGGGAACTGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgggagcggatttgaacgttgcgaagca < 1:1166655‑M2/149‑128 (MQ=255) cATGCGAGAGTAGGGAACTGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgggagcggatttgaacgttgcgaagcaac < 1:374810‑M2/149‑130 (MQ=255) gtaggggggtagggaaaTGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgattgtcggtgaacgctctcctgagtaggacaaatccgccgggagcggatttgaacgttgcgaagcaacg > 2:831397‑M2/9‑19 (MQ=255) gagaGCAGGGACCTGccaggcagcaaataaatcgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttggcggtgaacgctctcctgagtaggacaaatccgccgggagcggatttgaacgttgcgaagcaacggccc > 2:1217167‑M2/1‑15 (MQ=255) agaaTAGGGAACTGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgggagcggatttgaacgttgcgaagcaacggcccg < 2:963123‑M2/149‑136 (MQ=255) agTAGGGAACTGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgggagcggatttgaacgttgcgaagcaacggcccgga < 2:1176034‑M2/149‑138 (MQ=255) agTAGGGAACTGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttagttttagctgttttttgtctgtgaacgctctcctgagtaggacaaatccgccgggagcggatttgaacgttgcgaagcaacggcccgga > 1:358919‑M2/1‑12 (MQ=255) gTAGGGAACTGccaggcatcaaataaaacgaaatgctcagtagaaagagagggccgttcgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgggagcggatttgaacgttgcgaagcaacggcccggag > 1:1208976‑M2/1‑11 (MQ=255) gTAGGGAACGGccaggcatcaaatacaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgggagcggatttgaacgttgcgaagcaacggcccggag > 1:637908‑M2/1‑11 (MQ=255) tgggggacTGccaggcatcaaataaaactaaaggctcagtccaaagattgggcctttcgttttatctgttgtttgttggtgaacgctcgcctgagtaggacaaatccgccgggagcggatttgaacgttgcgaagcaacggcccggagg > 2:73993‑M2/3‑10 (MQ=255) tAGGGAACTGCCAGGCATCAAATTAAGCAGTAAGCCGGTCATAAAACCGGTGGTTGTAAAAGAATTCGGTGGAGCGGTAGTTCAGTCGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCAcc < 1:1048664/149‑1 (MQ=11) tAGGGAACTGCCAGGCATCAAATTAAGCAGTAAGCCGGTCATAAAACCGGTGGTTGGAAAAGAATTCGGTGGAGCGGTAGTTCAGTCGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTGCCGCCAcc < 2:468539/149‑1 (MQ=11) aGGGAACTGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgggagcggatttgaacgttgcgaagcaacggcccggaggg < 1:1168785‑M2/149‑141 (MQ=255) aGGGAACTGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgggagcggatttgaacgttgcgaagcaacggcccggaggg > 1:280143‑M2/1‑9 (MQ=255) aGGGAACTGccaggcatcaaataaaacgaaaagctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgggagcggatttgaacgttgcgaagcaacggcccggaggg > 1:490017‑M2/1‑9 (MQ=255) aGGGAACTGTCAGGCATCAAATTAAGCAGTAAGCCGGTCATAAAACCGGTGGTTGTAAAAGAATTCGGTGGAGCGGTAGTTCAGTCGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCAccc > 1:422493/1‑149 (MQ=14) ggAACTGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgggagcggatttgaacgttgcgaagcaacggcccggagggtg < 2:1014648‑M2/149‑143 (MQ=255) ggAACTGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctgagtaggacaaatccgccgggagcggatttgaacgttgcgaagcaacggcccggagggtg < 1:1075678‑M2/149‑143 (MQ=255) cTGCCAGGCATCAAATTAAGCAGTAAGCCGGTCATAAAACCGGTGGTTGTAAAAGAATTCGGTGGAGCGGTAGTTCAGTCGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACCCTAATTa < 1:1164162/149‑1 (MQ=35) cTGCCAGGCATCAAATTAAGCAGGAAGCCGGTCATAAAACCGGTGGTTGTAAAAGAATTCGGTGGAGCGGTAGTTCAGTCGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACCCTAATTa < 1:614661/149‑1 (MQ=25) tGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctcctgggtaggacaaataagtgtggagcggatttgcacgttgcgaagcaacggcccggagggtggcggg < 1:474722‑M2/149‑148 (MQ=255) tGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctccggaggaggagcccatcgccgggcgcggatttgaacgttgcgaagcaacggcccggagggtggcggg < 1:1159020‑M2/149‑148 (MQ=255) tGccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttagctgttgtttgtcggtgcacgctctcccgagtaggacaaatccgccgggagcggatttgcacgttgcgaagcaacgccccggagggtggcggg < 2:578686‑M2/149‑148 (MQ=255) tGCCAGGCATCAAATTAAGCAGTAAGCCGGTCATAAAACCGGTGGTTGTAAAAGAATTCGGTGGAGCGGTAGTTCAGTCGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACCCTAATTAg > 1:1059106/1‑149 (MQ=37) | CAGAACGCAGAAGCGGTCTGATGAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAGTAAGCCGGTCATAAAACCGGTGGTTGTAAAAGAATTCGGTGGAGCGGTAGTTCAGTCGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCACCCTAATTAG > CP009273/3940027‑3940318 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |