| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,420,353 | A→C | 28.7% | intergenic (‑86/+135) | hisJ ← / ← argT | histidine/lysine/arginine/ornithine transporter subunit/lysine/arginine/ornithine transporter subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,420,353 | 0 | A | C | 28.7% | 73.5 / 31.8 | 62 | intergenic (‑86/+135) | hisJ/argT | histidine/lysine/arginine/ornithine transporter subunit/lysine/arginine/ornithine transporter subunit |
| Reads supporting (aligned to +/- strand): ref base A (21/20); new base C (8/7); total (30/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.66e-01 | |||||||||||
AAACGCCGCAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGTAGA > CP009273/2420205‑2420501 | aaaCGCCGCAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCaaa > 2:1110124/1‑149 (MQ=255) aaCGCCGCAGTTGCGCTGGGGAAGGCCAGAACCAGTGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCACATTATTGACCATCAAGGCaaaa < 2:938980/149‑1 (MQ=255) aaCGCCGCAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGACTATTTACAGGGTTGTTACACTTATCCTGCCATAAAATTGAACATCAAGGCaaac > 2:1149134/1‑148 (MQ=255) aaCGCCGCAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCaaaa > 1:849726/1‑149 (MQ=255) aaCGCCGCAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCaaaa < 2:57752/149‑1 (MQ=255) aaCGCCGCAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCAGCAAAGCaaaa > 1:354418/1‑149 (MQ=255) ccgcAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATc > 1:1130254/1‑149 (MQ=255) agcgggaggaGGCCAGAACCAGATAGAGCGATAGCACCAGTTTTGTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGt < 2:656016/145‑1 (MQ=255) agaAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTCTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACg > 2:171596/1‑149 (MQ=255) agaAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAAATGACAGTCTTTTTATAGGGAATATTTACAGGCTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCCAAATATCCCGCCCCGTCAGGCg > 2:264395/1‑149 (MQ=255) cAGAACCAGAGAGAGCGATAGCACCAGTTTTTTTTTTTTTTTCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGCTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTattatt > 2:786130/1‑149 (MQ=255) aGAACCAGAGATATCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTAttt < 1:439139/149‑1 (MQ=255) aGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGCTCTCAACGGACAGTCTTTTTATAGGGAATATTTACTGGTTTGTTACACTTATCGTGCAATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTAttt < 1:417542/149‑1 (MQ=255) aaCCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTCCAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTAttttt > 2:1059785/1‑149 (MQ=255) aaCCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGCTTGTTACACTTATCGTGCCATAAAATTGATCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTAttttt > 2:709116/1‑149 (MQ=255) accagacggattgATAGCACCAGTTTTTTCATAATGTCTTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTc < 1:1081398/137‑1 (MQ=255) aCCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTc < 1:1144671/149‑1 (MQ=255) agagagCGATAGCACCAGTTTTTTGATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAGAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTaa > 1:916329/1‑149 (MQ=255) agagagCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTCTTATTTTTCAttga > 1:441257/1‑147 (MQ=255) agagagCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTaa > 1:1203892/1‑149 (MQ=255) gagagCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATTGTGAATATTTACAGGTTTGTTACACTGATCGTGCCATAAAATTGAACATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTaaa < 1:49588/149‑1 (MQ=255) agagCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTaaaa > 2:1113098/1‑149 (MQ=255) gATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAAAATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGAAACATATACCGCCCCGCTAGAGGTATTATTTTTAATACAAAATgag > 2:590179/1‑147 (MQ=255) aCCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAgaa > 1:1232716/1‑147 (MQ=255) ttttttCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTCTGCAt > 1:331878/1‑149 (MQ=255) ttttCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCAttt < 2:1160195/149‑1 (MQ=255) ttttCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCAttt < 2:75068/149‑1 (MQ=255) ttttCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAATTATGCAttt > 1:489090/1‑149 (MQ=255) cTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGATTGATACACTTCTCGTGAAATAAAATTTACCATCAAGTCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTGAAACTGCTTAATTATGTAtttgagtgtcgtcgag > 2:159882/1‑136 (MQ=255) tCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGAAGTATTATTGTGCATTAAGAATGCTTAAGTATGAATTTCAATCCACCACGAt > 1:231573/1‑149 (MQ=255) aCTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGt < 1:1174181/149‑1 (MQ=255) aCTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGt < 1:1149905/149‑1 (MQ=255) cTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCAGAAAATGGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCATTGCACCACGATAGTg > 2:932801/1‑149 (MQ=255) aCAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGAATTTCAATGCACCACGATAGTGcaa < 2:990166/149‑1 (MQ=255) aGTCTTTTTGTAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatg < 2:360061‑M1/149‑37 (MQ=255) aGTCTTTTTGTAGGGAATATTTACAGGTTTGTTACACTTATCGGGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatg < 2:65961‑M1/149‑37 (MQ=255) aGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatg > 1:171815‑M1/1‑113 (MQ=255) tCTTTTTATAGGGAATATTTACCGTTTTGCTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACaaa < 1:895661/149‑1 (MQ=255) cTTTCTATTGGAAATATTTACAGGTTTGTTATACTTTTCGTGCCATAAAATAGACCATCAAGGCAAAATATCCCGCCCAGTTATATCTATTATGTTTCTTTAAAAATACTTTAGTATGCATTTCACTCCTCCACGATAGTGcaacaatc < 2:1006401/149‑3 (MQ=255) ttttATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCt > 1:392827/1‑149 (MQ=255) ttttATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCt > 1:715808/1‑149 (MQ=255) gggAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGATAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGCTAGTGCAACAAACCTGGCGTGc > 1:364750/1‑149 (MQ=255) agAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTCAGGCGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACACACCTGGCGTGCa > 2:636590/2‑149 (MQ=255) aaTATTTACAGGTTTGTTACACTTTTCGTGCTATAAAATTGAACATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCAcc < 1:28363/149‑1 (MQ=255) aaTATTTACAGGTTTGTTACACTTATCGTGCCTTAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAGCCTGGCGTGCAcc < 1:845874/149‑1 (MQ=255) cAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTTATAATGCTTAAGTATGCATTTCAATGCACCACGATACTGCAACAAACCTGGCGTGCACCAtgatgac > 2:840906/1‑148 (MQ=255) gTTTGTTACACTTTTCCTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCAt < 2:208226/149‑1 (MQ=255) gTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCAt < 2:579018/149‑1 (MQ=255) tctGTTACACTCATCGTGCCATAAAATTGACCATCAAGCCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATTCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCAtt < 1:169104/147‑1 (MQ=255) tGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctg < 1:73562‑M1/149‑66 (MQ=255) ttACACTTATCGTGCCATAAAATTGACCCTCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTCTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGAGCATTCCAt > 1:746276/1‑149 (MQ=255) tACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGAAGTATTATTTTTCATTAAAACTGCTTAAGTATGCATTGCAATGCACCACGATATTGCAACAAACCTGGAGTCCACCATGATCATCATTCCATc > 1:469856/1‑149 (MQ=255) acacTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCa < 2:392827/149‑1 (MQ=255) acTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAgg < 2:1018311/149‑1 (MQ=255) tcttcggggcATAAAATTGACCTGCAGGGCAAAATTTCCCGCCCCGTTACACGTATTATTTTTCATTATAAATGCTTAAGTATGCATTTCAGTGCACCACGATAGTGCAACAGACCTGGCGTGCACCATGATGATCATTCCATCAGGTa < 2:671760/140‑1 (MQ=255) tATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCAATCCGGtcc > 2:740118/1‑147 (MQ=255) tGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCtt < 1:436587/149‑1 (MQ=255) aTAAAATTGACCATCAAGGCTAAATATCCCGCCTCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACTTCGATAGTGCAACAATCCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCa < 1:1017961/149‑1 (MQ=255) tAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGGAACAAAACTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTcccca > 2:663161/1‑147 (MQ=255) tAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTTCAGCTTCCCAg > 2:117890/1‑149 (MQ=255) aaaTTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcct < 2:153764‑M1/149‑87 (MQ=255) aTTGACCATCACGGCAAAATAGCCCGCCCCGTTAGACGTATTATTTTTCTTTAAAAATGCTTCAGTATGCATTTCAATGCACCACGATAGTGCAACATACCTGGCGTGCACCATGATGATCATTCTATCAGGTACAGCTTCCCAGCGAc < 2:849726/149‑1 (MQ=255) gACCATCAAGCCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTa < 1:305548/149‑1 (MQ=255) cATCAAGGCAAAATATCCCGCCCTGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCa < 1:430098/149‑1 (MQ=255) aTCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAACTGGGTAAGGATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAg > 1:967900/1‑149 (MQ=255) aTCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAg < 2:1130254/149‑1 (MQ=255) aaGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCa < 1:786130/149‑1 (MQ=255) cAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGt > 2:98530/1‑149 (MQ=255) aaaaTATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAGTGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTACCAGCGACGTATCAGTCACCGTa > 1:207164/1‑149 (MQ=255) aaaaTATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGCTAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGTa > 1:977565/1‑149 (MQ=255) aaaaTATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACgactaggtcacggtg > 2:1162986/1‑135 (MQ=255) aaTATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCTTTTCAATGCACCACGATAGTGCAACAAACCTGGCGAGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGATGTATCAGTCACCGTAGa < 2:916329/149‑1 (MQ=255) aaTATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTAACCATAGa > 1:421709/1‑149 (MQ=255) | AAACGCCGCAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGTAGA > CP009273/2420205‑2420501 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |