| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,529,197 | A→G | 69.8% | S11P (TCA→CCA) | envZ ← | sensory histidine kinase in two‑component regulatory system with OmpR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,529,197 | 0 | A | G | 69.8% | 114.4 / 49.4 | 88 | S11P (TCA→CCA) | envZ | sensory histidine kinase in two‑component regulatory system with OmpR |
| Reads supporting (aligned to +/- strand): ref base A (13/14); new base G (29/32); total (42/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCATCAACATACGCACTTCGTACGCGAGGACTTTATTAAACTGCTGGAGGCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGC‑CGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATG > CP009273/3529053‑3529344 | tcatcaACATACGCACTTCGTACTGGAGGTCTTTATTTATCTGCTGGAGTCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGAACtt < 1:537855/149‑1 (MQ=255)tcatcaACATACGCACTTCGTACGCGAGGACTTTATTAAACTGCTGGAGGCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGAACtt < 1:676195/149‑1 (MQ=255)tcatcaACATACGCACTTCGTACGCGAAGACTTTATTTCTCTGTTTGAGGCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGAACtt < 1:537915/149‑1 (MQ=255) atcaACATACGCACTTCGTACGCGAGGACTTTATTAAACTGCTGGAGGCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGGACTTCg < 1:517990/149‑1 (MQ=255) caACATACGCACTTCGTACGCGAGGACTTTATTAAACTGCTGGAGGCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGGACTTCGTg < 1:951705/149‑1 (MQ=255) aaCATACGCACTTCGTACGCGAGGACTTTATTAAACTGCTGGAGGCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGGACTTCGTgg < 2:835525/149‑1 (MQ=255) aaCATACGCACTTCGTACGCGAGGACTTTATTAAACTGCTGGAGGCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGGACTTCGTgg < 2:1094576/149‑1 (MQ=255) aaCATACGCACTTCGTACGCGAGGACTTTATTAAACTGCTGGAGGCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGGACTTCGTgg < 1:511826/149‑1 (MQ=255) aaCATACGCACTTCGTACGCGAGGACTTTATTAAACTGCTGGAGGCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGCCCGGCCAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGGACTTCGTgg < 1:243304/149‑1 (MQ=255) aaCATACGCACTTCGTACGCGAGGACTTTATTAAACTGCTGGAGGCGCGGCAAAATCGCGAAGTTCATCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGGACTTCGTgg < 2:9386/149‑1 (MQ=255) cATACGCACTTCGTACGCGAGGACTTTATTAAACTGCTGGAGGCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGGACTTCGTGGCg > 2:613413/1‑149 (MQ=255) aTACGCACTTCGTACGCGAGGACTTTATTAAACTGCTGGAGGCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTCCGGGCCAATGGCCTTCGTGGCgc > 1:93293/1‑148 (MQ=255) aTACGCACTTCGTACGCGAGGACTTTATTAAACTGCTGGAGGCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGACAAATGAACTTCGTGGCga > 1:1040135/1‑149 (MQ=255) tACGCACTTCGTACGCGAGGACTTTATTAAACTGCTGGAGGCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACAGGCAAATGAACTTCGTgggcac > 2:1125879/1‑145 (MQ=255) tACGCACTTCGTACGCGAGGACTTTATTAAACTGCTGGAGGCTCGGCAAAATCGCGAAATTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATACCGTACGGGCAGATGAACTTCGTGGCgag > 2:636952/1‑149 (MQ=255) cccACTTCGTACGCGAGGACTTTATTAAACTGCTGGAGGCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGGACTTCGTGGCGAGaa < 2:159640/147‑1 (MQ=255) cccACTGCGTACGCGAGGACTTTATTTAACTGCTGGAGGCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGCGCAATAACGGACGGGCAACTGGGCTTCGTGGCGGGaa < 2:423057/147‑1 (MQ=255) cGCACTTCGTACGCGAGGACTTTATTAAACTGCTGGAGGCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGGACTTCGTGGCGAGaa < 2:159674/149‑1 (MQ=255) cGCACCTCGTACGCGAGGACTTGAGTAAACTGCTGGAGGCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGGACTTCGTGGCGAGaa < 2:503356/149‑1 (MQ=255) ctcTTCGTACGCGAGGACTCTATTAAACTGCTGGAGGCTCGGCAAACTGTCGACGTTCCGCACCACCAGATAAGTCGTCACCAGGCGGGCGAACAGCAAGGTGACGAGGAGCAATAACGTACGGGCAAATGGACTTCGTGGCGAGAAgc < 2:542795/147‑1 (MQ=255) cACTTCGTACGCGATGACTTTCACAAACTGCGGGAGGCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGGACTTCGTGGCGAGAAgc < 2:1238899/149‑1 (MQ=255) gAGGCCTTTATTAAACTGCTGGAGGCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGGACTTCGTGGCGAGAAGCGCAATCGCCTCa > 2:632747/1‑149 (MQ=255) tttATTAAACTGCTGGAGGCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCttt < 2:484805/149‑1 (MQ=255) ttattaAACTGCTGGAGGCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTa < 2:243029/149‑1 (MQ=255) ttattaAACTGCTGGAGGCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGACGAGCAATAACGTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTa < 2:297108/149‑1 (MQ=255) tattaAACTGCTGGAGGCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGGACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTag > 1:395028/1‑149 (MQ=255) atgaaaCTGCTGGAGGCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGGACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTaga < 1:824349/146‑1 (MQ=255) ttaAACTGCTGGAGGCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGGACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTagag > 1:373244/1‑149 (MQ=255) taAACTGCTGGAGGCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGGACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGc > 1:1103503/1‑149 (MQ=255) aaaCTGTGGGGGGCGCGGCAAAATCGCGAAGTTCAGCATCACCAGACAAGTCGTCACCAGGCTGGCTAACAGCAAGTTTTCGAGTAGCAATACCGTACGGGCAAAGGAACTTCGTGTTGAGAAGCGCAATCGCCTCATGCTTTAGAGc‑c < 2:544262/149‑1 (MQ=255) ctgctgGAGGCTGGGCAAAATCGCGAAGTTCAGCACCAGCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGGACTTCGTGGCGAGAAGCGCAAGCGCCTCATGCTTTAGAGC‑CGTc < 2:824236/149‑1 (MQ=255) gctgGAGGCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGGACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGC‑CGTCCg < 1:175658/149‑1 (MQ=255) ctgGAGGCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGGACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGC‑CGTCCgg > 1:718741/1‑149 (MQ=255) ctgGAGGCTCGGCAAAATCGCGAAGTTCACCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAAGGGACTTCGTGGCGAGAAGCGCAATCGCCCCATGCGTTAGAGC‑CGTCCgg > 1:778678/1‑149 (MQ=255) gCTCGGCAAAATCGCGAAGTGCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAACGGGCAAAAGAGCAATTACGGAGGGGCAAATGGACTTCATGGCGAGACGGGCCACGGCCCGCTGCATTAGGAC‑CGCCCGGTACaca > 2:441332/1‑147 (MQ=255) tCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGGACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGC‑CGTCCGGTACAAAGa < 2:303439/149‑1 (MQ=255) tCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGGACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGC‑CGTCCGGTACAAAGa > 1:572296/1‑149 (MQ=255) tCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGGACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAAAGC‑CGTCCGGTACCAAGa > 1:272185/1‑149 (MQ=255) cGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCACTAACGTACGGGCAAATGGACTTCGGGGCGAGCAGCGCAGTCGCCCCATGCTTTAGAGC‑CGTCCGGGACAAAGAc > 1:31226/1‑149 (MQ=255) ggCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGGACTTCGTGGCGAGAGGCGCAATCGCCTCATGGTTTGACGC‑CGTCAGGTACAAAGACg > 2:652310/1‑149 (MQ=255) gccataccatcgAGGTTCAGCACCACCCGAAAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGGACTTCGGGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGC‑CGTCCGGGACAAAGACg > 2:1135909/11‑149 (MQ=255) gCAAAATCGCGAAGTTCAGCACCACTAGGTAAGTCGTCACCAGGCTGTCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGGACTTAGTGGCGAGAAGCGCAATTGCCTCATGCTTTAGAGC‑CGTCCGGTACAAAGACGt > 1:697314/1‑149 (MQ=255) gCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGGCCGCGGTCGGTGAGCAATAACGGACGGGCAAATGGACCTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGC‑CGTCCGGTACAAAGACGt < 1:903637/149‑1 (MQ=255) gCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGGACTTCGTGGCGAGAAGCGCAATCGCCTCCCGCTTTCGAGC‑CGTCCGGTACCAAGACGt > 2:870694/1‑149 (MQ=255) cAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGGACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGC‑CGTCCGGTACAAAGACGTa > 1:147950/1‑149 (MQ=255) tCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGAGAACAGACAGGTGACGATGAGCAATAAAATACGGGCAAAGGGACTTCGTGGCGAGAAGCGCAATCGCCTCCTGCTTTA‑AGCACGTCCGGGCAAAAGACGTaacaca > 2:1019711/1‑144 (MQ=255) cgAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGC‑CGTCCGGTACAAAGACGTAGcccagac > 1:131725/1‑149 (MQ=255) cgAAGTTCAGCACCACCAAATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGGACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGC‑CGTCCGGTACAAAGACGTAGcccagac > 1:910513/1‑149 (MQ=255) ttCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGGACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGC‑CGTCCGGTACAAAGACGTAGcccagaccccag > 2:264638/1‑149 (MQ=255) accaccAGATAAGGCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAACAGCGTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGC‑CGTCCGGTACAAAGACGTAGACCAGACCCCAGACGGTc < 2:916111/149‑1 (MQ=255) caccaGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAACAGCGTACGGGCAAAAGGACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAAAGC‑CGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGGCTg > 2:930479/1‑149 (MQ=255) agcaGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGAGGGGCAATACCGTACGGGCAAATGGACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTGAGAGC‑CGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGa < 2:60609/147‑1 (MQ=255) accaGGTAAGTCGGCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGC‑CGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGa < 2:384713/149‑1 (MQ=255) accaGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGC‑CGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGa > 1:254374/1‑149 (MQ=255) caGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGGACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGC‑CGTCCGGTACAAAGACGTAGCCAAGACCCCAGACGGGCTGAAt > 1:790324/1‑149 (MQ=255) gtcgtcACCAGGCTGTCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGGACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAAC‑CGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAAcgc > 2:781443/1‑149 (MQ=255) gtcggcAACAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGGACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGC‑CGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAAcgc < 1:479181/149‑1 (MQ=255) tcgtcACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGC‑CGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAAcgcg > 2:487091/1‑149 (MQ=255) aGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGGACTTCCTGGCGAGAAGCGCAATCGACTCATGCTTTAGAGC‑CGTCCGGTACAAAGACCTAGCCCAGACCCTAGACGGTCTGAATGTAACGCGGAAGCGCt > 2:792395/1‑149 (MQ=255) ggCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGACAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGC‑CGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTg < 2:1040135/149‑1 (MQ=255) gCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGGACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGC‑CGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTgg < 1:701310/149‑1 (MQ=255) tGGCGAACAGCAAGGGGACGAGGAGCAATAACGTACGGGCAAATGGACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGC‑CGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGAt < 2:85576/149‑1 (MQ=255) gAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATTGACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGC‑CGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGAtcttc < 1:356639/149‑1 (MQ=255) gAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGGACTTCGTAGCGTTTAGCGCAATCGCCTCATGCGTTAGAGC‑CGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGAtcttc < 1:544274/149‑1 (MQ=255) gAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGC‑CGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGAtcttc > 2:1139854/1‑149 (MQ=255) gCAAGGTGACGATGAGCAATAACGTACGGGCAAATGAACTTGGTGGCGAGAAGCGCAATGGCCTCATGCTTTAGAGC‑CGTCCGGGACAAAGACGTAGCCCAGCCCCCAGACGGGCCGAATGTAACGCGGCAGCGCTGGATCTGCCTcca > 2:381507/1‑149 (MQ=255) gCAAGGTGACGATGAGCAATAACGTACGGGCAAATGAACTTCGTGGCGAGAAGCGCACTCGCCTCATGCATTAGAAC‑CGTACGGTACAAAGACGTAGCCCAGCCCCCAGACGGGCTTAATGTCACGCGGAAGCGCTGGATCTTCTTcca > 2:155138/1‑149 (MQ=255) cAAGGTGACGATGAGCAATAACGTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGC‑CGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTccac < 2:334272/149‑1 (MQ=255) cAAGGTGACGATGAGCAATAACGTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGC‑CGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTccac < 2:333966/149‑1 (MQ=255) aTGAGCAATAACGTACGGGCAAATGGACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGC‑CGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGgcgc < 2:965072/149‑1 (MQ=255) ggCAATCACGTCCGGGCAAAGGGACTTCGCGGCGGGAAGCGCCATCGCCCTACTCTTTAGAGC‑CGCGCGGTACAACGACGTAGCCCAGGCCCCAGACGGTCTGAATGTAACGCGGATGCGCTAGATCGTCACACACCGTGCGGCGCAGa < 2:585633/148‑1 (MQ=255) ggaaTAACGTACGGGCAAATGAATTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGC‑CGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGAc < 2:465159/147‑1 (MQ=255) gCAATAACGTACGGGCAAATGGACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGC‑CGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGAc < 2:826066/149‑1 (MQ=255) gCAATAACGTACGGGCAAATGGACTCCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGC‑CGTCCGGTACAAAGACTTAGCCCCGTCCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGAc < 2:992715/149‑1 (MQ=255) gCAATAACGCACGGGCAAATGGACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGC‑CGTCCGGTACAACGACGTAGTCCAGACCCCCGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGAc < 2:992762/149‑1 (MQ=255) gCAACAACGTACGGGCAAATGGACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGC‑CGTCCGGTACAAGGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGAc < 2:741586/149‑1 (MQ=255) aaTAACGTACGGGCAAATGGACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGC‑CGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGAcgc > 2:264454/1‑149 (MQ=255) tAACGTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGC‑CGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGa > 2:539499/1‑149 (MQ=255) tAACGTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGC‑CGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGGCTGCATGTAGCGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGAcgggg > 2:31003/1‑146 (MQ=255) gTACGGGCAAATGAACTTCGTGGCGAGAAGCGAAATCGACTCATGCTTTAGAGC‑CGTCCGGTACAAAGGCGTAGCCAAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCCCAGACGCGAAATc > 1:170233/1‑149 (MQ=255) tACGGGCAAATGGACTTCGTGGCGAGAAGCGCAAGCGCCTCATGCTTTAGAGC‑CGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCt > 2:772245/1‑149 (MQ=255) aCGGGCAAATGGACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGC‑CGTCCGGTACAAAGGCGTAGCCCAGAGCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCCCCATGCGGCGCAGCAGCGCAACCTg > 2:202807/1‑149 (MQ=255) aCGGGCAAATGGACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGC‑CGTCCGGTACAAAGACGTAGACCAGACGCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTg > 2:751828/1‑149 (MQ=255) cAAATGGACTTCGTGGCGAGAAGCGCAATCGCCTCCTGCTTTAGAGC‑CGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGt < 2:1026845/149‑1 (MQ=255) aTGGACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGC‑CGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGGGCTGGATCTTCTTCCACCATGCGGCGCAGGCGGGAAATCTGCACGTCgt > 2:362104/1‑148 (MQ=255) aTGGACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGC‑CGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCGGACGCGAAATCTGCACGTCGa < 2:272185/149‑1 (MQ=255) aTGGACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGC‑CGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGa < 2:572296/149‑1 (MQ=255) gAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGC‑CGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATg > 1:745806/1‑149 (MQ=255) | TCATCAACATACGCACTTCGTACGCGAGGACTTTATTAAACTGCTGGAGGCTCGGCAAAATCGCGAAGTTCAGCACCACCAGATAAGTCGTCACCAGGCTGGCGAACAGCAAGGTGACGATGAGCAATAACGTACGGGCAAATGAACTTCGTGGCGAGAAGCGCAATCGCCTCATGCTTTAGAGC‑CGTCCGGTACAAAGACGTAGCCCAGACCCCAGACGGTCTGAATGTAACGCGGATGCGCTGGATCTTCTTCCACCATGCGGCGCAGACGCGAAATCTGCACGTCGATG > CP009273/3529053‑3529344 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |