| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,266,916 | G→A | 4.1% | A506A (GCG→GCA) | yjcC → | putative membrane‑anchored cyclic‑di‑GMP phosphodiesterase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,266,916 | 0 | G | A | 4.1% | 301.9 / 2.0 | 99 | A506A (GCG→GCA) | yjcC | putative membrane‑anchored cyclic‑di‑GMP phosphodiesterase |
| Reads supporting (aligned to +/- strand): ref base G (48/46); new base A (2/2); total (50/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.11e-01 | |||||||||||
AGTCATTTGATTGCGGAACACATCATCGAGCTGGCGCACAGCCTGGGGTTAAAAACGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCGAGA > CP009273/4266770‑4267064 | aGTCATTTGATTGCGGAACACATCATCGGGCTGGCGCACAGCCTGGGGTTAAAAACGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGAt < 2:27649/149‑1 (MQ=255) gcATTTGATTGCGGAACACATCATCGAGCTGGCGCACAGCCTGGGGTTAAAAACGATCGCTGAAGGCGTCGGAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCCGGGATGGGTCTTTGCGAAGGCGATgc > 1:669453/2‑149 (MQ=255) gATTGCGGAACACATCATCGAGCTGGCGCACAGCCTGGGGTTAAAAACGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCAATGCcgccgc > 1:1194580/1‑149 (MQ=255) gATTGCGGAACACATCATCGAGCTGGCGCACAGCCTGGGGTTAAAAACGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCAATGCcgccgc > 1:251931/1‑149 (MQ=255) tGCGGAACACATCATCGAGCTGGCGCACAGCCTGGGGTTAAAAACGATCGCTGAAGGCGTCGAAAAAGGTGATCAGGTTAACTGGCTGCTCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAgg < 1:907990/149‑1 (MQ=255) cGGAACACATCATCGAGCTGGCGCACAGCCTGGGGTTAAAAACGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGGTCTTTGCGAAGGCGATGCCGCCGCAGgtg > 1:101858/1‑149 (MQ=255) gAACCCATCATCGAGCCGGCGCACAGCCTGGGGTTAAAAACGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGtt < 1:1141480/149‑1 (MQ=255) gAACACATCATCGAGCTGGCGCACAGCCTGGGGTTAAAAACGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCGAACGCGGCGTGCGCTATGGCCAGGGATGGTTCTTTGCGAAGGCGATGCGGCCGCAGgtgta > 1:64258/1‑148 (MQ=255) caccgcaccGAACTGACGCACAGCCTGGGGTAAAAAACGAACGCTGAAGCCGTCGAAACTGAGGAGCAGGTTACCTCGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTCTGCGAAGGCGATGCCGCCGCAGGTGTTTAt < 1:436429/141‑1 (MQ=255) catcatCGAGCTGGCGCACAGCCTGGGGTTAAAAACGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCCGGGATGATTCTTTGCGCAGGCGATGACGCGGCACGTGTTTATGc > 2:653550/1‑149 (MQ=255) atcatcGAGCTGGCGCACAGCCTGGGGTTAAAAACGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCa > 1:228417/1‑149 (MQ=255) atcatcGAGCTGGCGCACAGCCTGGGGTTAAAAACGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCa > 2:425074/1‑149 (MQ=255) atcatcGAGCTGGCGCACAGCCTGGGGTTAAAAACGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCa > 1:507621/1‑149 (MQ=255) atcatcGAGCTGGCGCACAGCCTGGGGTTAAAAACGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGGTTATGCa > 1:452838/1‑149 (MQ=255) tcatcGAGCTGGCGCACAGCCTGGGGTTAAAAACGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCaa < 2:1077603/149‑1 (MQ=255) ttcGGGCTGGCGCACAGCCTGGGGTTAAAAACGATCNCTGAAGGCGTCGAAACCGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTTCGCTATTGCNAGGGATGGTTCTTTGCGAAGGCGATGCCGCCTCAGGTGTTTATGCAatg < 2:916542/148‑1 (MQ=255) atcGAGCTGGCGCAGAGCCTGGGGTTAAAAACGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAatg < 2:383306/149‑1 (MQ=255) atcGAGCTGGCGCACTGCCTGGGGTTAACAACGATCGGTGCAGGCGTCACAACTAGGGAGCGGGACCACTCGCCGCCCAAACTCTGCGGGCGCTATTGCCAGGGATTGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTAGTCAatg < 1:555515/149‑1 (MQ=255) tcGAGCTGGCGCACAGCCTGGGGTTAAAAACGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTGTGCCatgg > 2:693875/1‑149 (MQ=255) tcGAGCTGGCGCACAGCCTGGGGTTAAAAACGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAatgg > 1:74108/1‑149 (MQ=255) cGAGCTGGCGCACAGCCTGGGGTTAAAAACGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAATCGCTGCTTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAatgga < 1:1095098/149‑1 (MQ=255) aGCTGGCGCACAGCCTGGGGTTAAAAACGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGAGGCCGTCGCAGGTGTTTATGCAatggatg < 2:1194348/149‑1 (MQ=255) ggCGCACAGCTTGGGGTTAAAAACGATTGCGGAAGGCGGCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGc < 1:128691/149‑1 (MQ=255) cgcACAGCCTGGGGTTAAAAACGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCaa < 1:779838/149‑1 (MQ=255) gcACAGCCTGGGGTTAATAACGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTTGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATCGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAAt > 2:916045/1‑149 (MQ=255) aGCCTGGGGTTAAAAACGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGATCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTAcc > 1:952532/1‑149 (MQ=255) ccTGGGGTTAAAAACGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGGTGCCGCCGCAGGTGTTTATGCAATGGATGGAGCGATGAcctg > 1:40012/1‑147 (MQ=255) tGGGGTTAAAAACGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGCAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCcgcg > 2:976457/1‑149 (MQ=255) tGGGGTTAAAAACGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCcgcg > 2:1168386/1‑149 (MQ=255) tGGGGTTAAAAACGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCcgcg > 2:541828/1‑149 (MQ=255) tGGGGTTAAAAACGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCcgcg > 1:631825/1‑149 (MQ=255) ggTTAAAAACGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCgg > 2:428965/1‑149 (MQ=255) ggTTAAAAACGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGGGTTTATGCAATGGATGGAGCAATTACCCGCGCgg > 2:429222/1‑149 (MQ=255) ttAAAAACGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCgggg > 1:504200/1‑148 (MQ=255) tAAAAACGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAg < 1:295213/149‑1 (MQ=255) aaataCGATCGCCGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGt < 2:1019884/149‑1 (MQ=255) aaaCGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGGTGGAGCAATTACCCGCGCGGGAGTTa > 2:1148562/1‑149 (MQ=255) aaaCGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCGGCGCGGGAGTTa > 2:260082/1‑149 (MQ=255) gATCGCTGAAGGCGTCGAAACTGAGTAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTCGCGAACGCGATGCTGCCGCAGGTGTTTATGCAATGGACGGAGCAATTACCCGCGCGGGAGTTAAcgc < 1:758391/149‑1 (MQ=255) gATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCGGCAGGTGTTTATGCAATGGAGGGAGCAATTACCCGCGCGGGAGTTAAcgc > 1:419930/1‑149 (MQ=255) gATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAAcgc > 1:54174/1‑149 (MQ=255) cTGAAGGCGTCGGAACTGAGGAGGAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCggg < 2:474014/149‑1 (MQ=255) cTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCggg < 1:465992/149‑1 (MQ=255) ggCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCTGGAGTTTACGCGCGGGCAATa < 2:1070159/149‑1 (MQ=255) gcgggcGAAACGGAGGAGCAGGTTAACTGGGTGCGCAAACGCGGCGTGCGGTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATa < 2:85272/144‑1 (MQ=255) cGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAAtt > 1:120037/1‑149 (MQ=255) aaCTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACa > 1:789888/1‑149 (MQ=255) cTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAgg < 2:1207155/149‑1 (MQ=255) gagCAGGTTAACTGGCTGCGCAAACGCCGCGTGCGCTATTGCCAGGGATGGTTCTTCGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACACGCGCGGGAGCTAAAGCGCGGGCAATAACATTACAGGCGGTg > 1:562461/1‑149 (MQ=255) gtccggTTAACGCGCTGCGCGAACTCCGCCTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATGACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTgg < 2:1208524/145‑1 (MQ=255) agCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCAATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTgg < 2:251931/149‑1 (MQ=255) agCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCAATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTgg < 2:1194580/149‑1 (MQ=255) agCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCATTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGTCAATAAAATTACAGGCGGTgg < 1:698725/149‑1 (MQ=255) cAGGTTAATTGGCTGCGGAAACGCGGAGTGGTGTTTTGTCATGGTTGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCg < 1:647438/149‑1 (MQ=255) aCTGGCTGCGCAAACGCGGCGGGCGCGCTTGCCAGGGATCGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCGATAACATTGCGGGCGGTGGCGATAATCg < 2:146867/149‑1 (MQ=255) cTGGCTGCGGAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGc < 2:127779/149‑1 (MQ=255) tGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCt > 1:71692/1‑149 (MQ=255) gccgcgcAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATAGAGCAATTAGCCGCGCGGGAGTTCACGCGCGCGCAATAAAATTACAGGCGGTGGCGATAATCGCTgg < 1:237160/146‑1 (MQ=255) gcgcAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAg > 1:675801/1‑149 (MQ=255) aaaCGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATGGCTGGGGGGGCg > 2:554064/1‑149 (MQ=255) caCGCGGCGTGCGCTATTGCCAGGGATGGTTCGTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGa < 2:505755/148‑1 (MQ=255) aaCGCGGCGTGCCCCATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGa < 1:137597/149‑1 (MQ=255) gcggcgTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCa < 1:774602/149‑1 (MQ=255) cggcgTGCGCCATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCaa < 1:554881/149‑1 (MQ=255) ggcgTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCaaa < 2:782014/149‑1 (MQ=255) tgcgcagctgcgatggAGGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGGTCAAACTGc > 2:12630/15‑149 (MQ=255) tGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGc > 1:1155181/1‑149 (MQ=255) tGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGc > 1:401571/1‑149 (MQ=255) tGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGc < 2:507621/149‑1 (MQ=255) tGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCGGGGAGTGCGATCAAACTGc > 1:868924/1‑149 (MQ=255) ggcgcTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGc < 2:228417/148‑1 (MQ=255) gcTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGa < 1:563935/149‑1 (MQ=255) gcTATTGCCAGGGATGGTCCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGa < 1:446824/149‑1 (MQ=255) cTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGAc > 2:171440/1‑149 (MQ=255) aTTGCCAGGGATGGTTCTTTGAGACGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACgg > 2:450822/1‑149 (MQ=255) ccAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCCATAAAATTACAGGCGGTGGCGATAATCGGTGGGGGGGCGGACAAACGGCCGACGGaaaa > 2:595318/1‑149 (MQ=255) ccAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGTGTGCGATCAAACTGCCGACGGaaaa < 1:621216/149‑1 (MQ=255) ccAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGaaaa > 1:763538/1‑149 (MQ=255) ccAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGAAGTGCGATCAAACTGCCGACGGaaaa > 1:224329/1‑149 (MQ=255) aGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTCTGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAAcg > 2:100976/1‑149 (MQ=255) gggATGGTTTCTTGCCAAGGCGATGCCGCCGCAGGTGTCTATCCAATGGATGGAGCAATTACCCCCGCAGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAAcgc < 1:290280/149‑1 (MQ=255) ggATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAAcgcg > 2:1154981/1‑149 (MQ=255) ggATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAAcgcg > 2:919046/1‑149 (MQ=255) gATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCgg < 2:775571/149‑1 (MQ=255) aTGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAAATACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCggg > 2:175958/1‑149 (MQ=255) tgcttCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGga < 2:1048041/146‑1 (MQ=255) tGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGga < 2:1048194/149‑1 (MQ=255) tGGTTCTTTGCGAAGGCGAGGCCGCCGTAGGTGTTTCGGGCATGGAGGGAGCGATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGga < 2:1182935/149‑1 (MQ=255) gTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGAGCGATCAAACTGCCGACGGAAAACGGGGgaga > 1:43937/1‑149 (MQ=255) tCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAg > 2:449897/1‑149 (MQ=255) cTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAgg < 1:215102/149‑1 (MQ=255) cTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAgg < 2:74108/149‑1 (MQ=255) tttGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTCCAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGt > 1:300466/1‑149 (MQ=255) cGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGAGGGACAGCGCGGGAGAAGGTctgc > 1:1163357/1‑149 (MQ=255) cGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGACAACGCGGGAGAAGGGctgc > 2:789444/1‑149 (MQ=255) aaGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTctgctg < 2:452838/149‑1 (MQ=255) aaGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTctgctg < 1:425074/149‑1 (MQ=255) ggCCATGCCGCCGCAGGGGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCg < 1:86766/149‑1 (MQ=255) gCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCga < 1:324401/149‑1 (MQ=255) gATGCCGCCGCAGGTGTTTATGCAATGGATGGGGCCATGTCCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCgaga < 2:355042/149‑1 (MQ=255) | AGTCATTTGATTGCGGAACACATCATCGAGCTGGCGCACAGCCTGGGGTTAAAAACGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCGAGA > CP009273/4266770‑4267064 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |