| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2420388 = | 1 (0.010) | 109 (1.080) | 80/296 | 0.1 | 99.1% | intergenic (‑121/+100) | hisJ/argT | histidine/lysine/arginine/ornithine transporter subunit/lysine/arginine/ornithine transporter subunit |
| ? | CP009273 | = 3577555 | NA (NA) | intergenic (+15/‑1) | insB1/yrhA | IS1 transposase B/pseudogene, interrupted by IS1E | |||||
Only 100 of 209 total aligned reads displayed.
GAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGTAGACATTAAAGTCGAAATACTTTTTCGCCATCTTGTCG > CP009273/2420240‑2420536 | aattgagcggcataacctgatgctgagacagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacca > 2:642054‑M1/149‑149 (MQ=255) gcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAAAAATg > 1:916823‑M1/143‑149 (MQ=255) ggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgtgcattatctgaacataaaacactatcaataagttggagtcattaccAAAAATGCt > 2:471499‑M1/141‑149 (MQ=255) aacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagatggagtcattaccAAAAATGCTAAAGt < 1:1374647‑M1/14‑1 (MQ=255) aCCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTGTAGGGAATATTTACAGGTTTGTTAGACTTATCGTGCTATGAAATTGATCATAAAGGCAACATATCCCGTTCCGTTATACGTATTATTTTTCATTAAAAATGCTggtgct > 1:742530‑M1/1‑143 (MQ=255) ccAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatg > 2:654943‑M1/1‑142 (MQ=255) ctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAAAAATGCTTAAGTATg < 1:876450‑M1/17‑1 (MQ=255) ctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtgcagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAAAAATGCTTAAGTATg < 2:1100222‑M1/17‑1 (MQ=255) cAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACTGGTTTGTTACTCTTATCGTGCCATAAGATTGACCATTATGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgc < 2:105109‑M1/149‑9 (MQ=255) cAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATACAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATACTggtgacgc > 1:1641887‑M1/1‑141 (MQ=255) cAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgc > 2:686456‑M1/1‑141 (MQ=255) cAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgc > 2:746184‑M1/1‑141 (MQ=255) tgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAAAAATGCTTAAGTCTGc < 1:247244‑M1/18‑1 (MQ=255) gaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAAAAATGCTTAAGTATGCa < 1:543528‑M1/19‑1 (MQ=255) ttttCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgcca > 2:1644373‑M1/1‑136 (MQ=255) gaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactcacaataagttggagtcaataccAAAAATGCATAAGTATGCATTTCaa < 2:751684‑M1/25‑1 (MQ=255) gaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAAAAATGCTTAAGTATGCATTTCaa > 2:1189063‑M1/125‑149 (MQ=255) ctcatgtCCTCGACTGACAGTCTTTTTATAGGGCATACTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaactta < 1:250386‑M1/146‑19 (MQ=255) gctgcaccaggcacggatgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttgaaaaaaaaaaaAAAAATGCTTAAGTATGCATTTCAATGc > 1:1106785‑M1/122‑149 (MQ=255) aaTGTCCTCAACTGACAGTCTTTTTATTGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACTATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttact < 2:1148899‑M1/149‑21 (MQ=255) aaTGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCCTTAAAAATGCTggtgatgctgccaacttact > 2:500859‑M1/1‑129 (MQ=255) agcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAAAAATGCTTAAGTATGCATTTCAATGcac < 1:147212‑M1/30‑1 (MQ=255) agcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAAAAATGCTTAAGTATGCATTTCAATGcac < 2:1302026‑M1/30‑1 (MQ=255) cacaaCTGACAGTCGTTTTATAGGGAATATTTACAGGTCTGTTACCCTTATCGGGCCATAAAACTGACCATCAAGGCAACATATCCCGCCCCGTTATACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgattta < 1:485108‑M1/147‑27 (MQ=255) tggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAAAAATGCTTAAGTATGCATTTCACTGCACCacgct < 1:317278‑M1/36‑3 (MQ=255) tggcacggctgggacggaagtcgctgtcgttcgcaaaatcggtggagctgcatgacaaaatcatcgggcattatctgaacataaaacactaccaataagttggagtcagtaccAAAAATGCTTAAGCATGCATTTCAATGCACCCCGAt < 1:966327‑M1/36‑1 (MQ=255) tCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTACCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttag > 2:1179450‑M1/1‑122 (MQ=255) acggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTg > 1:205484‑M1/110‑149 (MQ=255) ggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGca > 2:532537‑M1/108‑149 (MQ=255) gctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGcaa > 2:435497‑M1/107‑149 (MQ=255) gctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGcaa > 1:1533780‑M1/107‑149 (MQ=255) tgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGcaaca < 1:1246569‑M1/45‑1 (MQ=255) tgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacaaaaaacactatcaataagttggagtcattaccAAACATGCTTAAGTCTCCATTTAACTGCACCGCGATAGTggaacc < 1:578190‑M1/45‑2 (MQ=255) aGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatg < 1:438580‑M1/149‑37 (MQ=255) aGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatg < 1:1321026‑M1/149‑37 (MQ=255) ggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACaaa < 1:270038‑M1/47‑1 (MQ=255) ggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACaaa > 2:876450‑M1/103‑149 (MQ=255) ttttATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtt > 2:1583692‑M1/1‑108 (MQ=255) tatgaaatatgtACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttga < 1:654943‑M1/144‑47 (MQ=255) taGGGAATATTTACAGGTTTGTTACACGTAGCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttga < 1:1616086‑M1/149‑47 (MQ=255) gggAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgagg < 2:739251‑M1/149‑49 (MQ=255) ggAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTACAAATGCTggtgatgctgccaacttactgatttagtgtgtgatggtgtttttgatgt > 1:1187087‑M1/1‑100 (MQ=255) ggAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggt > 1:1001766‑M1/1‑100 (MQ=255) catattCTCAGGATTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATGAAAAATGCTggtgatgctgccaacttactgatttagattatgagggtgtttttgaggtgc > 1:283886‑M1/2‑98 (MQ=255) tatTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCTACATTTCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctc < 2:132678‑M1/149‑54 (MQ=255) ttctcaaaatcggtggagctgcatgacaaagtcatcggacatcatctgaacataacacactatccctacgttggcgtcattaccAAAAATGCCGACGTATGCATTTCCATGCACCACGATAGTGCTACAAACCTGGCGTGCaccataat < 2:632039‑M1/65‑4 (MQ=255) ctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCAtgatga > 1:1100222‑M1/83‑149 (MQ=255) tcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATgatgat < 2:152060‑M1/68‑1 (MQ=255) tttGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttc < 1:471930‑M1/149‑64 (MQ=255) atcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTc > 2:1292043‑M1/77‑149 (MQ=255) ttACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtt > 2:276300‑M1/1‑82 (MQ=255) ttACACTTATCGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtt > 2:895077‑M1/1‑82 (MQ=255) gtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATc < 1:955920‑M1/77‑1 (MQ=255) ggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAg < 2:1448358‑M1/79‑1 (MQ=255) cTTATCGTCCCATAAAATTGACCACCAAGGCAACATATCCCGCCCCTTTAGACGTATTATTTTTCATTAAACATTCTggtgatgccgccaacttccttgtttattgtatgatggtgtttttgaggtgctccagtggcttctgtttctat < 1:686456‑M1/149‑73 (MQ=255) ggatcGTGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatc < 1:817401‑M1/147‑74 (MQ=255) gctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTa > 2:333083‑M1/68‑149 (MQ=255) gctgcatgacaaagtcaccgggcattatctgaacataaaacactatcaataagttggagccattaccAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGAGTGCACCATGATGATCATTCCATCAGGTa < 1:1216668‑M1/82‑1 (MQ=255) ctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTAc > 1:398688‑M1/67‑149 (MQ=255) tgcaagactaaggcatcggtcactatcgcagcagaaaacacgatcaataagtgggagtcattaccCAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACa > 2:1573927‑M1/66‑149 (MQ=255) gcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAg > 1:1355962‑M1/65‑149 (MQ=255) tGCCATAAAATTGACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgt < 1:1514061‑M1/149‑80 (MQ=255) gacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTc > 1:864105‑M1/61‑149 (MQ=255) acaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacaAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGTGACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTcc < 2:222195‑M1/90‑1 (MQ=255) aaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCa < 2:1509496‑M1/92‑1 (MQ=255) aagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAg > 2:1284079‑M1/57‑149 (MQ=255) tcgggcattatctgaacataaaacactatcaataagttggagtcattaccAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGt < 2:1258547‑M1/99‑1 (MQ=255) gACCATCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttcgtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttca < 1:296710‑M1/149‑92 (MQ=255) gggcattatctgaacataaaacactatcaataagttggagtcattaccAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTAt < 2:253958‑M1/101‑1 (MQ=255) gcattatctgaacataaaacactatcaataagttggagtcattaccAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCa > 1:1302026‑M1/47‑149 (MQ=255) aTCAAGGCCACATATCCCGCCCCGTTAGCCGTATTATTTTTCATTAAAAATGCTggtgatgctgcacacttacagatttagtgtatgatgttgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagcta > 2:1458604‑M1/1‑54 (MQ=255) aTCAAGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTACCTCGAAATGCAgataatgcaaccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagcta > 2:1625382‑M1/1‑54 (MQ=255) atctgaacataaaacactatcaataagttggagtcattaccAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCACCGACGTATCAGTCAc < 2:289929‑M1/108‑1 (MQ=255) aGGCAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactga > 2:1445828‑M1/1‑50 (MQ=255) catcttatcccgcCCCGTTTGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttattgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacgg < 2:1231120‑M1/144‑103 (MQ=255) cAACATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgttgctatcagctgtccctcctgttcagctactcacgg > 2:2723‑M1/1‑47 (MQ=255) cataaaacactatcaataagttggagtcattaccAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGTAGAc > 1:1064699‑M1/35‑149 (MQ=255) atCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggt < 1:1336270‑M1/149‑109 (MQ=255) atCCCGCCCCGTTAGACGTATTATGTTTCATTAAAAATGCTggtgatgctgccaacttactgagttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggt < 1:899919‑M1/149‑109 (MQ=255) aaaacactatcaataagttggagtcattaccAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGTAGACAtt > 2:764352‑M1/32‑149 (MQ=255) aaaacactatcaataagttggagtcattaccAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGTAGACAtt < 1:776125‑M1/118‑1 (MQ=255) cccGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgc < 2:1530907‑M1/149‑111 (MQ=255) aaacactatcaattagttggagtcattaccAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGTAGACATTa > 2:1374647‑M1/31‑149 (MQ=255) cGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccatcttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttaatctactgccggggtggttcgt > 2:555710‑M1/1‑37 (MQ=255) gCCCCGTTAGACGTATTATTTTTCAGTAAAAATGCTggtgatgctgccaacttgctgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgta > 2:825529‑M1/1‑36 (MQ=255) tatcaataagttggagtcattaccAAAAATGCTGAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGTAGACATTAAAGTCg > 2:543528‑M1/25‑149 (MQ=255) caataagttggagtcattaccAAAGATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCAGCGTTGACATTAAAGTCGaaa < 2:942581‑M1/128‑1 (MQ=255) caataagttggagtcattaccAAAAATGCGTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCGTCCCATCGACGTATCAGTCACCGTAGACATTAAAGTCGaaa < 1:1575904‑M1/128‑1 (MQ=255) tAGACGTATTATTTTTCATTAAAAATGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaa < 1:22992‑M1/149‑121 (MQ=255) ggagtcattaccAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGTAGACATTAAAGTCGAAATACTTTTTc > 1:1045251‑M1/13‑149 (MQ=255) gagtcattaccAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGTAGACATTAAAGTCGAAATactttttag < 1:49315‑M1/138‑3 (MQ=255) agtcattaccAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGTAGACATTAAAGTCGAAATACTTTTTCGc < 2:1593896‑M1/139‑1 (MQ=255) tttttCATTAAAAATGCTggtgctgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccg < 1:1621029‑M1/149‑132 (MQ=255) accAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGTAGACATTAAAGTCGAAATACTTTTTCGCCATCTTg > 1:1331622‑M1/4‑149 (MQ=255) ttAAAAATGCTggtgatgctgccaacttactgatttcgtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtcccccctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatca < 2:191941‑M1/149‑139 (MQ=255) ccAAAAATGCTTAAGTATGCATTTCAATGCAGCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACCGCTTCCCAGCGACGTATCAGTCACCGTAGACATTAAAGTCGAAATACTTTTTCGCCATCTTGt > 2:1103652‑M1/3‑149 (MQ=255) ccAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGTAGACATTAAAGTCGAAATACTTTTTCGCCATCTTGt > 2:717897‑M1/3‑149 (MQ=255) ccAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACAGTAGACATTAAAGTCGAAATACTTTTTCACCATCTTGt < 2:1132020‑M1/147‑1 (MQ=255) aaaaaTGCTggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctggccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagc < 2:317169‑M1/149‑141 (MQ=255) aaaaaTGCTTAATTTTGGACTCTACTGCACCACGATAGTGCCACAAACCGCGCCTGCACCATGATGATCATTCCACCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGTAGACATTAAAGTCGAAATACTTTTTCGCCATCTTGTCg < 2:84330/149‑1 (MQ=255) | GAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGTAGACATTAAAGTCGAAATACTTTTTCGCCATCTTGTCG > CP009273/2420240‑2420536 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |