| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 223539 | 61 (0.600) | 25 (0.260) | 10/284 | 11.1 | 29.9% | noncoding (1294/2904 nt) | rrlH | 23S ribosomal RNA of rrnH operon |
| ? | CP009273 | 2721269 = | NA (NA) | noncoding (1275/2904 nt) | rrlG | 23S ribosomal RNA of rrnG operon | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
ATGCACCGAAGCTGCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGTGAGTCGACCCCTAAGGCGAGGCCGAAAGGCGTAGTCG > CP009273/223392‑223622 | aTGCACCGAAGCTGCGGCAGCGAGGCTTATGCGTTGTGGGGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTc < 2:1270876/149‑1 (MQ=255)aTGCACCGAAGCTGCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGGGACAAGCCCtctc > 1:554346/1‑149 (MQ=255) catcGAAGCTGGGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGcc < 2:256433/146‑1 (MQ=255) cacggagggtGCGGCAGCGATGTCGGTTCGTTGTTGGGTAGGGTAGCGTTCTGTAAGCCTGTGAAGGTGGACTTGGAGGT‑ATGGTGGAGGTATCAGAAGGGCGAATGCTGACATAAGTAGCGATAAAGCGGGTGAAAGGCCCGCTCggc < 1:339859/140‑3 (MQ=11) gAAGCTGCTGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGTCCGCTCGCCGGaa < 1:1147697/149‑1 (MQ=255) gAAGCTGCGGCAGCGACGCTTACGCGTTGGTGGGTAGGGGGGCGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGaa < 2:417379/149‑1 (MQ=255) aaGCTGCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGGGCGGTCTGGAAGCCTGTTGAGGTGTACTGTGAGGC‑ACGCTGGTGGTATCAGAAGTGCGCATGCGGACATAAGTAACGGTAAAGCGGGTGAAAAGCCCGCTCGCCGGAAg < 1:40649/149‑1 (MQ=11) aaGCTGCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAg > 1:144960/1‑149 (MQ=37) aaGCTGCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGACGGagg < 1:204868/149‑3 (MQ=255) tGCGGCAGCGACGCTTATGCGTTGTGGGGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGGGAAAAGCCCGCTCGCCGGAAGAccc > 2:823657/1‑148 (MQ=255) cGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAg < 2:493798/149‑1 (MQ=38) cGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAg < 1:703997/149‑1 (MQ=38) cGGCAGCGACGCTTAAGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTACTGTCAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAg > 1:1043016/1‑149 (MQ=255) aGCGACGCTTATGCGGTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGtt < 2:1102409/149‑1 (MQ=38) gCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTc < 2:1441103/149‑1 (MQ=38) gACGCTTGTGCGTGGTCGCGTCGGGGAGCGTTCGGTAAGCCTGTGAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCt < 2:375802/149‑1 (MQ=11) gACGCTTATGCGCTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGCGAAGGTG‑CCAGCAAAGTGGTGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCt < 2:1615925/149‑1 (MQ=1) aCGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTg < 2:1645154/149‑1 (MQ=39) cGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGt < 2:352138/149‑1 (MQ=38) cTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTcc < 2:1539355/149‑1 (MQ=38) ttATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCa > 1:1362091/1‑149 (MQ=38) attagttgtgGGGTAGGGGAGCGTTCTGGAAGCCTGTTAAGGTGTACGGTGAGGT‑AGGCTGGACGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGTGTGAAAAGCCCTCTCGCCGGAAGACCAAGGGTTCCTGTCCAAc < 1:1385957/145‑1 (MQ=11) aTGCTTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTACGGTGAGGT‑ATGCTGGAGGCATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAAc < 2:594600/149‑1 (MQ=255) aTGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAAc < 1:981488/149‑1 (MQ=38) gCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGGGAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGAGAATGCTGACATAAGTAACGATAAAGCGGGCGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGt < 2:639139/149‑1 (MQ=255) cGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGtt < 1:213343/149‑1 (MQ=35) cGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGtt > 2:841778/1‑149 (MQ=35) gttgttGGGTAGGGGAGCGTTCTGTAAGCCTGTGATGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGCTCCTGTCCAACGtgc > 1:1025870/1‑147 (MQ=255) ttgttgGGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGGGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTGaa > 1:1168316/1‑149 (MQ=21) gttgGGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCCGCAGTGCGAATGCTGACATAAGTAGCGACAAAGCGGGTGAAAAGCCCGCGCGCCGGAAGACCCAGGGTTCCTGTCCCCCGTGAATc > 2:794774/1‑149 (MQ=11) ttgGGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCg > 1:279153/1‑149 (MQ=35) tgGGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCgg < 1:486967/149‑1 (MQ=35) gggTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCggg < 2:935967/149‑1 (MQ=35) gggTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCggg > 2:1171471/1‑149 (MQ=35) ggggAGCGTTCTGTAATCCTGTAAAGGTGTACTGTGAGGG‑ATGCAGGAAAGTTCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAgg < 2:1610532/149‑1 (MQ=11) gggAGCGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAggg > 2:420774/1‑149 (MQ=35) gggAGCGTTCTGTAAGCCGGTGAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAggg < 2:212872/149‑1 (MQ=25) ggAGCGGTCTGTAAGCCTGTGAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGACGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGt < 2:951808/149‑1 (MQ=21) gAGCGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGGAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGGTAATCGGGGCAGGGTg > 2:1363686/1‑149 (MQ=25) cggtCTGTAAGCCTGTGAAGGTGTACTGTGGGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGTGAGt < 1:988280/146‑1 (MQ=25) cGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGTGAGt > 2:657125/1‑149 (MQ=35) tCTGTAAGCCTGTGAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGTGAGTCGa > 2:1480609/1‑149 (MQ=35) cTGTAAGCCTGTGAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGTGAGTCGAc < 2:1585882/149‑1 (MQ=34) tGTAAGCCTGTGAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGTGAGTCGAcc > 1:131574/1‑149 (MQ=35) gTAAGCCTGTGAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGTGAGTCGAccc < 2:144960/149‑1 (MQ=35) aGCCTGTGAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGTGAGTCGACCCCTa < 2:1645342/149‑1 (MQ=35) gCCTGTGAAGGTTTACTGTGAGGT‑TTGCTGGTGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACTAAGTGTTCCTGTCCACCGTTTTTCGGGGCAGGGTGAGTCGACCCCTaa < 1:1573368/149‑1 (MQ=11) ccTGTGAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGTGAGTCGACCCCTAAg > 2:1476196/1‑149 (MQ=35) tgtgAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGTGGGTCGACCCCTAAGGc > 2:236787/1‑149 (MQ=25) tgtgAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGTGAGTCGACCCCTAAGGc > 1:1271176/1‑149 (MQ=35) gAAGGTGTACTGTTAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGGGAGGCGACCCCTAAGCCGAg > 1:1002982/1‑149 (MQ=255) gAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGTCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGTGAGTCGACCCCTAAGGCGAg < 2:1070166/149‑1 (MQ=25) gAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGGAGGGAGAGGCGAGCCCGAAGGCGAg > 2:122243/1‑149 (MQ=11) aGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCAGTCCAACGTTAATCGGGGCAGGGTGAGTCGACCCCTAACGCGAGGc > 1:501713/1‑149 (MQ=25) tgtACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGGGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGTGGGTCGACCCCTAAGGCGAGGCCGa > 1:411522/1‑149 (MQ=21) gtACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCAGCTCGCCGGAAGACCAAGGGTTCCTCTCCAACGTTAATCGGGGCAGGGTGAGTCGACCCCTAAGACGAGGCCGaa > 2:200878/1‑149 (MQ=255) gtgAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGTGAGTCGACCCCTAAGGCGAGGCCGAAAGGCg > 2:1491386/1‑149 (MQ=32) aGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCGCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGGGAGGCGACCCCTAAGGCGAGGCCGCAAGGCGTAg > 2:460413/1‑149 (MQ=255) aGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCGCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATAGGGGCAGGGTGAGTCGACCCGTAAGGCGCGGCCGAAAGGCGGAg > 1:1328032/1‑149 (MQ=11) ggT‑ATGCTGGAGGTAACAGAAGGGCGAATGCTGACATAAGGAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGTGAGTCGACCCCTAAGGCGAGGCCGAAAGGCGTAGt < 2:879827/149‑1 (MQ=12) t‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGTGAGTCGACCCCTAAGGCGAGGCCGAAAGGCGTAGTCg > 2:85972/1‑149 (MQ=11) | ATGCACCGAAGCTGCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGTGAAGGTGTACTGTGAGGT‑ATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTCGCCGGAAGACCAAGGGTTCCTGTCCAACGTTAATCGGGGCAGGGTGAGTCGACCCCTAAGGCGAGGCCGAAAGGCGTAGTCG > CP009273/223392‑223622 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |