New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 360104 =NA (NA)164 (1.620) 102/296 0.0 NA intergenic (‑38/+557) lacZ/lacI pseudogene, truncated/DNA‑binding transcriptional repressor
?CP009273 = 360286 NA (NA)intergenic (‑220/+375) lacZ/lacI pseudogene, truncated/DNA‑binding transcriptional repressor

Only 100 of 130 total aligned reads displayed.

CCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCCGC  >  CP009273/360138‑360430
                                                                                                                                                    |                                                                                                                                                
    ccgccGGGCCGTCGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaattggga                                                                                                                                              <  2:396/146‑1 (MQ=255)
    ccTCCGGGCCTGTGCTTCGCAACGTTCAATTCCGCTNCCGGCGGATTTGTCCTACCCAGGAGAGCGTTCACCGACAAACAACAGATACAACGAAAGGCCNAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaattggga                                                                                                                                              <  1:1193141/149‑1 (MQ=11)
     cTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggcattgagtc                                                                                                                                             >  1:224175/1‑145 (MQ=12)
     cTCCGGGCCGTTGCTCCGCAACGTGCAAATCCGCTCCCGGCGGAGTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAACACGAATCTCCCATTCGTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaattgggaa                                                                                                                                             <  2:323066/149‑1 (MQ=11)
      tCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGCTTTATTTGATGCCTGgggaattgggaat                                                                                                                                            >  2:1285042/1‑149 (MQ=255)
           gCCGTTGCTTCGCACCGTTCAAATCCGCTCCCGGCGAATTTGACCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGACTTGGGaattaatt                                                                                                                                       <  2:1164976/149‑1 (MQ=255)
           gCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGTAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGaattaatt                                                                                                                                       >  1:1193316/1‑149 (MQ=255)
           gCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGaattaatt                                                                                                                                       >  1:939183/1‑149 (MQ=255)
                ggCTTCGCATCGTTCACACCCGCTCCCGGCGGATCCGTCCTACTCAGGAGAGCGTATACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGa                                                                                                                                  <  2:496314/148‑1 (MQ=14)
                  cTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAg                                                                                                                                >  2:1366192/1‑149 (MQ=255)
                  cTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAg                                                                                                                                >  2:1366454/1‑149 (MQ=255)
                    tCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGAc                                                                                                                              <  1:540835/149‑1 (MQ=255)
                        aaCGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAAGGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGACTGGGGAATTGGGAATTACTTCTTGAGGACGaat                                                                                                                          >  2:279147/1‑148 (MQ=255)
                          cGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAgg                                                                                                                        <  2:1113271/149‑1 (MQ=255)
                          cGTTCAAATCCGCTCCCGGCGGAGTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAgg                                                                                                                        <  2:3495/149‑1 (MQ=255)
                            ttCAAATCCGCCCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGc                                                                                                                      <  2:1424828/149‑1 (MQ=255)
                             tCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGTACTGGTTGTTTAAGACgggcagacc                                                                                                                     >  1:632546/1‑141 (MQ=11)
                              caaatccgccgggagcggATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATGCTTGAAGACGAAAGGGCCt                                                                                                                    >  2:1146397/15‑149 (MQ=17)
                               aaaTCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTc                                                                                                                   >  2:1095613/1‑149 (MQ=255)
                                 aTCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGGTAAAACGAAAGGCCCAGTCTTTCGACTGAGCCGTTCGTGTTATTTGATGCCTGGGGAATAGGGAAGGAATCATAGAAGCCGAAGGGGCCACGt                                                                                                                 >  1:1334892/1‑149 (MQ=14)
                                 aTCCGCTCCCGGCGGATTGGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAATGGCCCAGTCTTTGGAATGGGCCTTTCGGTTTACTGAATGCGTGGGGAATGGGGGACTAAGTCGTGAAGACGAACGAGCCTCgc                                                                                                                 >  1:548073/1‑148 (MQ=14)
                                      cTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATAc                                                                                                            <  2:479435/149‑1 (MQ=255)
                                        cccGGCGGATTTGTCCTACTCAGGAGAGCGTCCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGc                                                                                                          <  2:1505626/149‑1 (MQ=255)
                                              ggATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTAttt                                                                                                    >  1:339189/1‑149 (MQ=255)
                                                  ttGTCCTACTCAGGCGGGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTtat                                                                                                <  2:728156/149‑1 (MQ=255)
                                                  ttGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTtat                                                                                                <  2:375769/149‑1 (MQ=255)
                                                  ttGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTtat                                                                                                >  1:1375212/1‑149 (MQ=255)
                                                        tACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACTCCTGTTTTTGGAGGTTa                                                                                          >  1:4379/1‑149 (MQ=255)
                                                          cttaGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAAt                                                                                        <  2:1261635/146‑1 (MQ=255)
                                                           tCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGCAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATg                                                                                       >  2:394915/1‑149 (MQ=255)
                                                           tCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGTCCTAACTCTTTAAGACGAAAGGCCTTCCCGCCACGCCTATGTTcataagatcgga                                                                                       >  1:375458/1‑141 (MQ=14)
                                                           tCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATg                                                                                       >  2:177797/1‑149 (MQ=255)
                                                           tCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTGTCGTTTTATTTGATGCCTGGGGAAGTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGGCAATg                                                                                       >  1:447632/1‑149 (MQ=255)
                                                              ggAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCa                                                                                    <  1:413721/149‑1 (MQ=255)
                                                               gagaGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCAt                                                                                   >  2:592374/1‑149 (MQ=255)
                                                                agagCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATg                                                                                  <  1:807872/149‑1 (MQ=255)
                                                                    cGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAATACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGaa                                                                              <  2:1131340/149‑1 (MQ=255)
                                                                    cGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGaa                                                                              <  1:1015593/149‑1 (MQ=255)
                                                                       ccACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCGGGGGAATTGGGATTTAATTCTTGAAAACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCAGGGGAAGAt                                                                           >  2:513705/2‑149 (MQ=255)
                                                                        cACCGACAAACAACAGATAAAACGTAAGTCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATc                                                                          <  1:748444/149‑1 (MQ=255)
                                                                         aCCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATcc                                                                         >  1:1622854/1‑149 (MQ=255)
                                                                         aCCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGACTTTCGTTTTATTTGATGCCTGGGAAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTGTTAAAGGTTAATGTCATGGGAAGATcc                                                                         >  1:1542891/1‑149 (MQ=255)
                                                                         aCCGACAAACAACAGATAAAAAGAAAGGCCTAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATcc                                                                         >  2:860041/1‑149 (MQ=255)
                                                                           cGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCCTGGGAAGATCCAg                                                                       >  2:914933/1‑149 (MQ=255)
                                                                           cGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGACAATCCAg                                                                       >  1:1447137/1‑149 (MQ=255)
                                                                           cGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAg                                                                       <  1:88465/149‑1 (MQ=255)
                                                                           cGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAg                                                                       >  2:692132/1‑149 (MQ=255)
                                                                           cGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAg                                                                       >  2:72424/1‑149 (MQ=255)
                                                                            gACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTATTGAAGAAGAAAGGGACTCGTGATACGCCTATTTTTATAAGTTGATGACATGGTGAGATcgatc                                                                      >  1:1135453/1‑145 (MQ=21)
                                                                               aaacaaCAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTATATAGGTTAATGTCATGGGAATATCCAGCCGa                                                                   >  2:622783/1‑149 (MQ=255)
                                                                               aaacaaCAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGAGTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTGGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGa                                                                   >  1:1495969/1‑149 (MQ=255)
                                                                                   aacaGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAAGGTAATGGGAAGATACAGACGACCAg                                                               >  1:729270/1‑149 (MQ=255)
                                                                                   aacaGAGAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGCCCCGGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAg                                                               <  2:1135341/149‑1 (MQ=255)
                                                                                    acaGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAgg                                                              <  2:91663/149‑1 (MQ=255)
                                                                                     caGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaattgg                                                                                                                                                >  2:865731/1‑66 (MQ=255)
                                                                                       aaTAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTCTAGGTTAATGTCATGGGAAGATACAGCCGACCAGGCtt                                                           >  1:904602/2‑149 (MQ=37)
                                                                                        aTAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCttt                                                          <  2:1418920/149‑1 (MQ=255)
                                                                                          aaaaCGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTcc                                                        <  2:1085126/149‑1 (MQ=255)
                                                                                          aaaaCGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTcc                                                        <  2:339189/149‑1 (MQ=255)
                                                                                            aaCGAAAGGCCCAGTCTTTCGACTGAGCCATTCGTTTGATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCATGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCAc                                                      >  2:1069097/1‑149 (MQ=255)
                                                                                            aaCGAAAAGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTCTAGGTTAATGTCATGGGAGGATGCAGCCGACCAGGCTTTCCAc                                                      >  1:199089/1‑149 (MQ=255)
                                                                                              cGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGa                                                                            >  1:102368/1‑125 (MQ=255)
                                                                                              cGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGa                                                                            <  2:102368/125‑1 (MQ=255)
                                                                                                 aaGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCcg                                                 <  2:224175/149‑1 (MQ=255)
                                                                                                  aggctcagtcgaaagACTGGGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGGTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCcgc                                                >  2:1195765/15‑149 (MQ=255)
                                                                                                   ggCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCcgcg                                               <  2:1339192/149‑1 (MQ=255)
                                                                                                    gCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGt                                              <  2:1014441/149‑1 (MQ=255)
                                                                                                    gCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGt                                              <  2:1015277/149‑1 (MQ=255)
                                                                                                     ctcagtcgaaagACTGGGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGGCCGCGTg                                             >  1:1123714/12‑149 (MQ=255)
                                                                                                     cccAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTg                                             >  2:149996/1‑149 (MQ=255)
                                                                                                     cccAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTg                                             <  1:1014047/149‑1 (MQ=255)
                                                                                                       cAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACACCCTCGTTcc                                           <  1:1095613/149‑1 (MQ=255)
                                                                                                                gACTGAGCCTTTCGTTTTATTTGATGCCTGgggaattgg                                                                                                                                                <  2:620179/39‑1 (MQ=255)
                                                                                                                gACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGt                                  <  2:1540659/149‑1 (MQ=255)
                                                                                                                gACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGt                                  <  2:159304/149‑1 (MQ=255)
                                                                                                                    gAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCATGCCCGCGTGCCGCTCCATGTCGtt                              <  2:1225037/149‑1 (MQ=255)
                                                                                                                     aGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTc                                                                                                                                      <  2:726386/44‑1 (MQ=255)
                                                                                                                     aGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTc                                                                                                                                      >  1:726386/1‑44 (MQ=255)
                                                                                                                     aGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTc                             <  2:779243/149‑1 (MQ=255)
                                                                                                                      gCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTcg                            <  2:1300906/149‑1 (MQ=255)
                                                                                                                         tttCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATCGGTTAATGTCATGGGATGATCCAGCCGACCGGGCTTTCCACGCCCGCGGGACGCTCCCTGTCGGTcgcgc                         >  1:460478/1‑149 (MQ=255)
                                                                                                                         tttCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTcgcgc                         >  2:281054/1‑149 (MQ=255)
                                                                                                                          ttCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTcgcgcg                        <  1:851432/149‑1 (MQ=255)
                                                                                                                              ttttATTTGATGTCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTtc                    >  2:957645/1‑149 (MQ=255)
                                                                                                                              ttttATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGCTCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGAGCGGTtc                    >  2:430998/1‑149 (MQ=255)
                                                                                                                               tatATTTGATGCCTGTGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCCGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGGGGTtct                   >  1:366824/3‑149 (MQ=255)
                                                                                                                                ttAGTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGAGACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTtctc                  <  1:864266/149‑1 (MQ=255)
                                                                                                                                 tATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCg                 <  2:1353074/149‑1 (MQ=255)
                                                                                                                                  aTTTGTTGCCGTGGGAATTGGGAATTAATTCTGGAAGACGAAAGGGCCTCGTGAGACGACTATTTTTATAGGTTAATTTCATGGGAAGATCCAGCCGACCAGGCTCTCCCCGCCCGCGTGCCCCTCCATGTCGTTCGCGCGGTTCTCgg                <  1:1238069/149‑1 (MQ=255)
                                                                                                                                      gATGCCTGGGGAATTGTGAACTAATTCTTGAATACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGTAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAAc            <  1:923257/149‑1 (MQ=255)
                                                                                                                                      gATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGTAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAAc            <  1:923218/149‑1 (MQ=255)
                                                                                                                                      gATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAAc            >  2:1474370/1‑149 (MQ=255)
                                                                                                                                      gATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAAc            >  1:953315/1‑149 (MQ=255)
                                                                                                                                      gATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAAc            >  1:871231/1‑149 (MQ=255)
                                                                                                                                        tGCCTGGGGAATTGGGAATTAATTATGGGAGACGAAAGGGCCGCGTGAGGCGCCCATTTTGATAGTTGAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAAcgc          <  1:1137716/149‑1 (MQ=255)
                                                                                                                                          ccTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGTTtccgagaaccgcgc        <  1:1555392/149‑13 (MQ=255)
                                                                                                                                           tgggggAATTGGGAATTAATTCTTGAAGACGAAAGGGCCACGTGCTACGCCTAGTTGTATAGGTTCATGTCATGGGATGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCt       <  1:508763/147‑1 (MQ=255)
                                                                                                                                             ggggAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGc     <  1:1387759/149‑1 (MQ=255)
                                                                                                                                              gggaattgggaattAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGcc    <  2:1375212/149‑1 (MQ=255)
                                                                                                                                                gaattgggaattAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATCATACGGGATGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCcgc  >  2:1543817/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                
CCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCCGC  >  CP009273/360138‑360430

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.