| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009273 | 636,546 | C→A | F446L (TTC→TTA) | ahpF → | alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)‑binding |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 636,546 | 0 | C | A | 98.7% | 237.4 / NA | 76 | F446L (TTC→TTA) | ahpF | alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)‑binding |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base A (44/31); minor base G (1/0); total (45/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CAAACTGCGCAGCCTGAAAAACGTCGACATTATTCTGAATGCGCAAACCACGGAAGTGAAAGGCGACGGCAGCAAAGTCGTTGGTCTGGAATATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTCGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGCATGGGCGAGATTATCATTGATGCGAAATGCGAAACCAACGTGAAAGGCGTGTTCGCAGCGGGTGACTGTACGACGGTTCCG > CP009273/636402‑636687 | cAAACTGCGCAGCCTGAAAAACGTCGACATTATTCTGAATGCGCAAACCACGGAAGTGAAAGGCGACGGCAGCAAAGTCGTTGGTCTGGAATATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTcc < 1:1618049/149‑1 (MQ=255) aCTGCGGAGCCTGAAAAACGTCGACATTCTTCTGAATGCGCAAACCACGGAAGTGAAAGGCGACGGCAGCAAAGTCGTTGTTCTGGAATACCGAGATCGTGTCAGCGGCGATATTAACAACATCGAACTGGCCGGTATTTTAGTCCAGa < 2:130389/149‑1 (MQ=255) cTGCGCAGCCTGAAAAACGTCGACATTATTCTGAATGCGCAAACCACGGAAGTGAAAGGCGACGGCAGCAAAGTCGTTGGTCTGGAATATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGAt < 1:1275913/149‑1 (MQ=255) cAGCCTGAAAAACGTCGACATTATTCTGAATGCGCAAACCACGGAAGTGAAAGGCAACGGAAGCAAAGTCGTTGGTCTGGAATATCGGGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTAGTTTAATCCAGATTGGTc > 1:631923/1‑149 (MQ=255) aGCCTGAAAAACGTCGACATTATTCTGAATGCGCAAACCACGGAAGTGAAAGGCGACGGCAGCAAAGTCGTTGGTCTGGAATATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTAGTTTGGTCCAGATTGGTct > 2:658046/1‑149 (MQ=255) gCCTGAAACACGGAGACCTTATTCCGAATGCGCAAACCACGGAAGTGAAAGGCGACGGCAGCAAAGTCGTTGGTCTGGAATATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTctg < 2:35036/149‑1 (MQ=255) cTGAAAAACGTCGACATTATTCTGAATGCGCAAACCACGGAAGTGAAAGGCGACGGCAGCAAAGTCGTTGGTCTGGAATATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGGATTTTAGTCCAGATTGGTctgct > 1:142218/1‑149 (MQ=255) aaaaCGTCGACATTATTCTGAATGCGCAAACCCCGGAAGTGAAAGGCGACGGCAGCAAAGTCGTTGGTCTGGAATATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCg < 1:411427/149‑1 (MQ=255) caaggTCGACATCATTCTGAATGCGCAAACCACGGAAGTGAAAGGCGACGGCAGCAAAGTCGTTGGTCTGGAATATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGa < 1:1133975/145‑1 (MQ=255) aaaCGTCGACATGATTCTGGAGGGGCAAGCCACGGAAGGGAAGGGCGACGGCAGCAAAGTCGTTGGTCTGGAATATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGa < 1:442543/149‑1 (MQ=255) aaCCTCGACATTATTCGGAATGCGCAAACCACGGAAGTGAAAGGCGACGGCAGCAAAGTCGTTGGTCTGGAATATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGaa < 1:1024485/149‑1 (MQ=255) gTCGACATTATTCTGAATGCGCAAACCACGGAAGTGAAAGGCGACGGCAGCAAAGTCGTTGGTCTGGAATATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAacac > 2:1378406/1‑149 (MQ=255) gTCGACATTATTCTGAATGCGCAAACCACGGAAGTGAAAGGCGACGGCAGCAAAGTCGTTGGTCTGGAATATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGACCGGTATTTTAGTCCAGATTGGTCTGCTACCGAacaa > 2:28085/1‑148 (MQ=255) gACATTATTCTGAATGCGCAAACCACGGAAGTGAAAGGCGACGGCAGCAAAGTCGTTGGTCTGGAATATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGCTTGGTCTGCTGCCGAACACCaa > 1:869196/1‑149 (MQ=255) gACATTATTCTGAATGCGCAAACCACGGAAGTGAAAGGCGACGGCAGCAAAGTCGTTGGTCTGCAATCACGGGACCGGGTCAGCGGCGATATTCACAACATCGAACTGACCGGTATTTTAGTCCAGACTGGTCTGCTGCCGAACCCCaa > 1:676176/1‑149 (MQ=255) gACATTATTCTGAATGCGCAAACCACGGAAGTGAAAGGCAACGGCAGCAAAGTCATTGGTCTGGACTACCCGGCTCGGGTCAGCGGAGATATTGCAAACAACTAACTGAGGGCGGTTTTAAGCCAAATTGGTCTGCTGCCGAACAccga > 1:676135/1‑147 (MQ=255) ttCTGAATGCGCAAACCACGGAAGTGAAAGGCGACGGCAGCAAAGTCGTTGGTCTGGAATATCGAGATCGTGTAAGCGGCGATATTCACAACATCGAGATGGCGGGCCTACTATGCCAGATTGGTCTGCTGCCGAACACCCACGGGcgc > 2:307253/1‑147 (MQ=255) tGAATGCGCAAACCACGGAAGTGAAAGGCGACGGCAGCAAAGTCGTTGGTCTGGAATATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGaa < 2:1361000/149‑1 (MQ=255) gAATGCGCAAACCACGGAAGTGAAAGGCGACGGCAGCAAAGTCGTTGGTCTGGAATATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAg < 1:143163/149‑1 (MQ=255) tGCGCAACCCACGGAAGGGAAAGGCGACGGCAGCAAAGTCGTTGGTCTGGAATATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGg‑cg < 1:954594/149‑1 (MQ=255) tGCGCAAACCACGGAAGTGAAAGGCGACGGCAGCAAAGTCGTTGGTCTGGAATATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGg‑cg < 1:1442502/149‑1 (MQ=255) tGCGCAAACCACGGAAGTGAAAGGCGACGGCAGCAAAGTCGTTGGTCTGGAATATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGg‑cg < 1:269491/149‑1 (MQ=255) aaaCCACGGAAGTGAAAGGCGACGGCAGCAAAGTCGTTGGTCTGGAATATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTc < 2:1076404/149‑1 (MQ=255) aaCCACGGAAGTGAAAGGCGACGGCAGCAAATTCGTTGGTCTGGAATATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACCCGAACTGGCCCGAAGG‑CGCAGTCg > 2:676389/1‑149 (MQ=255) taCGGAATGGAAAGGCGGCGGCAGTAAGGGCGTTGTGCTGGAATATCGAGATCGTGTCAGCGGCGCTATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCATCTGGCTCGAAGG‑CGCAGTCGAAc < 1:726418/148‑1 (MQ=255) cACGGAAGTGAAAGGCGACGGCAGCAAAGTCGTTGGTCTGGAATATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCCACTGGCTCGAAGG‑CGCAGTCGAAc > 2:1487826/1‑149 (MQ=255) cACGGAAGTGAAAGGCGACGGCAGCAAAGTCGTTGGTCTGGAATATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAAc > 2:718945/1‑149 (MQ=255) cACGGAAGTGAAAGGCGACGGCAGCAAAGTCGATGGTCTGGAATATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCCCGAAGG‑CGCAGGCGaaa > 1:512644/1‑148 (MQ=255) aaGTGTAAGGCGACGGCAGCAAAGTCGTTGGTCTGGAACATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAAc < 2:1486291/149‑1 (MQ=255) gAAAGGCGACGGCAGCAAAGGCGTTTTTCTGGAATATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGCa > 1:1631808/1‑149 (MQ=255) aGGCGACGGCAGCAAAGTCGTTGGTCTGGAATATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGCATgg > 1:1196068/1‑149 (MQ=255) agcaAAGTCGTTGGTCTGGAATATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGCATGGGCGAGATTAt > 2:1014686/1‑149 (MQ=255) gcaAAGTGGTTGGTCTGGAATATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGCATGGGCGAGATTATc < 1:512663/149‑1 (MQ=255) caAAGTCGTTGGTCTGGAATATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGCATGGGCGAGATTATCa > 1:1140645/1‑149 (MQ=255) aaaGTCGTTGGTCTGGAATATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGCCTGGGCGAGCTTATCAt > 2:29701/1‑149 (MQ=255) aGTCGTTGGTCTGGAATATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTCTTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGCACGTAACCGCATGGGCGAGATTATCATTg > 2:1500123/1‑149 (MQ=255) cGTTGGTCTGGAATATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGCATGGGCGAGATTATCATTGatg < 2:427565/149‑1 (MQ=255) cGTGGGTCTGGAATATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGCATGGGCGAGATTATCATTGatg < 1:1401646/149‑1 (MQ=255) gTTGGTCTGGAATATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGCATGGGCGAGATTATCATTGatgc > 2:1517719/1‑149 (MQ=255) gTCTGGAATATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGTCCGGTATTATAGTCCAGATAGATCTGCTGCCGAACCCCAACTGGCTCGAAGA‑CGCAGACGAACGTAACCCCAAGGGCGGGATTCTCACTGgtgcaaaa > 1:103772/1‑149 (MQ=255) gTCTGGAATATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGCATGGGCGAGATTATCATTGatgcgaaa > 2:1237418/1‑149 (MQ=255) tCTGGAATATCGAGATCGTGTCAGCGGCGATATTCACAACATCGACCTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGCATGGGCGGGATTATCATTGatgcgaaat > 2:471207/1‑149 (MQ=255) tgtaaTATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGACGGTATTCTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGCTTGGGCAAGATTATCATTGatgcgaaatgc > 1:1037260/4‑149 (MQ=255) tGGAATATAGAGATCGTGTCAGCGGCGATATTCGCAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGAATGGACGAGATCATCATTGatgcgaaatgg > 1:448475/1‑148 (MQ=255) gggaagttCGAGAGCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGCATGGGCGAGATTATCATTGatgcgaaatgc < 1:1149443/142‑1 (MQ=255) aaTATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGCATGGGCGAGATTATCATTGatgcgaaatgcgaa > 1:480629/1‑149 (MQ=255) atatagagggcttgtCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGCATGGGCGAGATTATCATTGAtgcgaaatgcgaaa < 1:415117/137‑1 (MQ=255) atCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGCATGGGCGAGATTATCATTGATGCGAAATGCGAAAcc > 1:401232/1‑149 (MQ=255) tCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTGGAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAGCGTAACCGCATGGGCGAGATTTTCATTGAGGCGAAATGCGAAAcaa > 1:454012/1‑147 (MQ=255) cGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGCATGGGCGAGATTATCATTGATGCGAAATGCGAAACCaa < 2:1063989/149‑1 (MQ=255) gagaTTGTTTGAGCGGTGATATTCACAACATTGAACTGGCTGGTATTTGAGTCCAGATTGGTCTGCTTCCGAACACCAACTGGCTCGAAGG‑CTCAGTCGAACGTAACCGCATGGGCGAGATTATCATTGATGCGAAATGTGAAACCAAc < 1:28085/149‑1 (MQ=255) aTCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGGTTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGCATGGGCGAGGTTGTCATTGATGCGGAGTGCGAAACCAACggg > 1:258813/1‑147 (MQ=255) gcGTGTCATCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGCATGGGCGAGATTATCATTGATGCGAAATGCGAAACCAACGTGa > 1:1465664/2‑149 (MQ=255) tgtCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGCATGGGCGAGATTATCATTGATGCGAAATGCGAAACCAACGGGAAAg > 2:574928/1‑149 (MQ=255) tgtCAGCGGCGATATTCACAACATCGAACTGGACGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGCATGGGCGCGATTATCATTGATGCGAAATGCGAAACCAACGTGAAAg > 2:660718/1‑149 (MQ=255) gtCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTACTGCCGAACACCAACTGGCTCGCAGG‑CGCAGTCGAACGTAACCGCATGGGCGAGATTATCATTGATGCGAAATGCGCACCCAACGTGAAAgg > 1:1069657/1‑149 (MQ=255) cAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGCATGGGCGAGATTATCATTGATGCGAAATGCGAAACCAACGTGAAAGGCg < 2:139565/149‑1 (MQ=255) cAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGCATGGGCGAGATTATCATTGATGCGAAATGCGAAACCAACGTGAAAGGCg > 1:360815/1‑149 (MQ=255) cggcgATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTTGTACGTAACCGCATGGGCGAGATTATCATTGATGCGAAATGCGAAACCAACGTGAAAGGCgtgt < 2:728737/149‑1 (MQ=255) cggcgATATTCACAACATCGAACCGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGCATGGGCGAGATTATCATTGATGCGAAATGCGAAACCAACGTGAAAGGCgtgt < 2:102735/149‑1 (MQ=255) ggcgATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGCATGGGCGAGATTATCATTGATGCGAAATGCGAAACCAACGTGAAAGGCGTGtt > 2:591264/1‑149 (MQ=255) ggagATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGCTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGCATGGGCGAGATTATCATTGATGCGAAATGCGAAACCAACGTGAAAGGCGTGtt < 1:632017/146‑1 (MQ=255) gcgATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGCATGGGCGAGATTATCATTGATGCGAAATGCGAAACCAACGTGAAAGGCGTGTTc > 1:685180/1‑149 (MQ=255) gATATTCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGCATGGGCGAGATTATCATTGATGCGAAATGCGAAACCAACGTGAAAGGCGTGTTCGc > 2:164137/1‑149 (MQ=255) ttCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGGACGTAACCGCATGGGCGAGATTATCATTGATGCGAAATGCGAAACCAAAGTGAAAGGCGTGTTCGCAGCg > 1:1437859/1‑149 (MQ=255) ttCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGCATGGGCGAGATGATCCTTGCTGCGAAATGCGAAACCAACGTGAAAGCGGTGTTCGCAGCg > 2:193365/1‑149 (MQ=255) tCACAACATCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGCATGGGCGAGATTATCATTGATGCGAAATGCGAAACCAACGTGAAAGGCGTGTTCGCAGCgg > 2:1501917/1‑149 (MQ=255) acaccacACCGAACTGACCGGTATTTTAGTCCAGATGGGTCTAATGCAAAACACCAGCTGG‑TAGCAGGAAGCAATCGATCAAAACGGCATGGGACGGATAAAAATTATTTCGCAATGCGAAACCATCTTGAAAGGCGTGTTCGCAGCgg < 1:737381/148‑1 (MQ=255) acaacaTCGAACTGGCCGGTATTTTAGTCCAGGTTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGCATGGGCGAGATTATCATTGATGCGAAATGCGAAACCAACGTGAAAGGCGTGTTCGCAGCGGGt < 1:659240/149‑1 (MQ=255) aTCGAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGCATGGGCGAGATTATCATTGATGCGAAATGCGAAACCAACGTGAAAGGCGTGTTCGCAGCGGGTGACTg > 1:4592/1‑149 (MQ=255) gAACTGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGCATGGGCGAGATTATCATTGATGCGCAATGCGAAACCAACGTGAAAGGCGTGTTCTCCGCGGGTGACTGTac > 2:537032/1‑149 (MQ=255) tGGCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGCATGGGCGAGATTATCATTGATGCGAAATGCGAAACCAACGTGAAAGGCGTGTTCGCAGCGGGTGACTGTacgacg < 1:298766/149‑1 (MQ=255) gCCGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGCATGGGCGAGATTATCATTGATGCGAAATGCGAAACCAACGTGAAAGGCGTGTTCGCAGCGGGTGACTGTACGACggg > 1:124804/1‑148 (MQ=255) ccGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGCATGGGCGAGATTATCATTGATGCGAAATGCGAAACCAACGTGAAAGGCGTGTTAGCAGCGGGAGACTCTACGACGGtt > 1:1287703/1‑149 (MQ=255) cGGTATTTTAGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGCATGGGCGAGATTATCATTGATGCGAAATGCGAAACCAACGTGAAAGGCGTGTTCGCAGCGGGTGACTGTACGACGGTTc > 1:678869/1‑149 (MQ=255) gTATTTGAGTCCAGATTGGGCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGCATGGGCGAGATGATCATTGATGCCAAATGCTAATCCAACGTGAAAGGCGTGTTCGCAGCGGGTGACTGTACGACGGTTCCg < 1:683204/149‑1 (MQ=255) | CAAACTGCGCAGCCTGAAAAACGTCGACATTATTCTGAATGCGCAAACCACGGAAGTGAAAGGCGACGGCAGCAAAGTCGTTGGTCTGGAATATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTCGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGG‑CGCAGTCGAACGTAACCGCATGGGCGAGATTATCATTGATGCGAAATGCGAAACCAACGTGAAAGGCGTGTTCGCAGCGGGTGACTGTACGACGGTTCCG > CP009273/636402‑636687 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |