New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	360104 =	NA (NA)	109 (1.340)	74/296	0.0	NA	intergenic (‑38/+557)	lacZ/lacI	pseudogene, truncated/DNA‑binding transcriptional repressor
	?	CP009273	= 360286	NA (NA)					intergenic (‑220/+375)	lacZ/lacI	pseudogene, truncated/DNA‑binding transcriptional repressor

CCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCCGCGTTT  >  CP009273/360141‑360434                                                                                                                                                  |                                                                                                                                                     cccTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGTAGAGCGTTCACCGACAAACAACAGGTAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTCTCGTTTTATTTGATGCCTGgggaattggg                                                                                                                                                   <  1:860671/149‑1 (MQ=255)  ccgccGGGCCTTTGCTTCCTAACGCTCAAATCCGCTCCCTGCTGATCTTTCCTCCTCAGGAGAGCCGTCTCCCCCACACAGCCAATAAACCGTAAGGCCCAGTCTTTCGACTGCGACCTGCGTTTTATTTGATGCCTGgtgaattaatt                                                                                                                                                  <  2:651503/146‑5 (MQ=2)  ccTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTCTATTTGGTGCCTGgggaattggga                                                                                                                                                  >  1:1161716/1‑149 (MQ=255)   cTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCCCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAGACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaattgggaa                                                                                                                                                 <  1:575335/149‑1 (MQ=255)    tCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGCAAGGCCCAGCCTTTCGACTGAGCCTTTCGTTTTAGTTGATGCCGGgggcactgggaat                                                                                                                                                >  2:196062/1‑149 (MQ=11)      cGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGaatta                                                                                                                                              >  1:1009770/1‑149 (MQ=40)       gggCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGaattaa                                                                                                                                             <  2:987732/149‑1 (MQ=255)        gaacgttgcgaagCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGaattaat                                                                                                                                            >  1:133634/13‑149 (MQ=255)          ccGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGGATTGGGGATTAATTc                                                                                                                                          >  2:450258/1‑149 (MQ=255)           cGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCt                                                                                                                                         <  1:1176848/149‑1 (MQ=255)            gTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGAGTCAAAGGGAATTTGGAATTGattatt                                                                                                                                        >  1:27302/1‑149 (MQ=11)            gTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGGGCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATGAATTCtt                                                                                                                                        >  2:1309914/1‑149 (MQ=255)             ttGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTg                                                                                                                                       >  1:1190109/1‑149 (MQ=255)               gCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGaa                                                                                                                                     >  1:786756/1‑149 (MQ=255)                 ttCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGa                                                                                                                                   <  1:489467/149‑1 (MQ=255)                   cggaaCGTTTAAATCCGCTCCCTGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACg                                                                                                                                 <  2:1296362/146‑1 (MQ=255)                     cAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACGGACAAACAACAGATAAAACGAAAGGCCCAAGCTTGAGACTGAGCCGTTCGTTTTATTTGATGCCTTGCGAAGTGCGACTTAGTCCTGTAAGACgca                                                                                                                               >  2:344426/1‑147 (MQ=11)                     cAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGCATTGGGAATTAATTCTTGAAGACGaa                                                                                                                               >  1:749110/1‑149 (MQ=255)                         gTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGCAAGGCCCAGTCTTTCGACTGAGCCTCTCGTTTTGTTTGATGCCTGGGGACTAGGGAATTAATTCTTGAAGACGAAAggg                                                                                                                           >  1:582924/1‑149 (MQ=17)                               aTCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGt                                                                                                                     <  2:852175/149‑1 (MQ=255)                               aTCCGCTCCCGGCGGATTTCTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAGAACAAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGt                                                                                                                     <  1:1139718/149‑1 (MQ=255)                                  cGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGCCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGAt                                                                                                                  >  2:1065197/1‑149 (MQ=255)                                    cTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATAc                                                                                                                <  1:591019/149‑1 (MQ=255)                                          gcggATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTAt                                                                                                          >  1:963017/1‑149 (MQ=255)                                            ggATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTAttt                                                                                                        >  1:1027343/1‑149 (MQ=255)                                             gATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGCCGTGACGAGGCCTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTAtttt                                                                                                       <  1:38086/149‑1 (MQ=21)                                              aTTTGTCCTACTCAGGAAAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTAttttt                                                                                                      <  1:271799/149‑1 (MQ=255)                                                gtgcctcaCTCAGGAGAGCGTCCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTATTTGTCTATAGGGCCTCGTGATACGCCTATTTTtat                                                                                                    <  1:322100/142‑1 (MQ=18)                                                 tGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTtata                                                                                                   <  1:703793/149‑1 (MQ=255)                                                   tCCTACTCAGGAGAGCGTTCACCGTCAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAgg                                                                                                 >  1:989303/1‑149 (MQ=255)                                                        cTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGTAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAAt                                                                                            <  2:816139/149‑1 (MQ=255)                                                         tCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGCATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATg                                                                                           >  1:660290/1‑149 (MQ=255)                                                         tCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATg                                                                                           >  1:856718/1‑149 (MQ=255)                                                         tCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCGGGGGGATTGGGAATTAATTCTTGAAGACGAAAGGGCCCCGTGATACGCCTCTTTTTATAGGTTATTg                                                                                           >  1:742198/1‑149 (MQ=21)                                                          cAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGGTAATGt                                                                                          >  2:1325794/1‑149 (MQ=255)                                                               gagCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTTATgg                                                                                     >  1:1315460/1‑149 (MQ=255)                                                                      cACCGGCGAACAACAGATATGTCGGAAGGCCCAGTCTTGCGGCTGAGCCTTTCGTTTTATTTGGTGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAGGGGCCTCGTGATGCGCCTATTTTTATAGGTTAATGTCATGGGAAGATc                                                                              <  2:984059/149‑1 (MQ=37)                                                                       aCCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaatt                                                                                                                                                      <  1:17473/76‑1 (MQ=39)                                                                       aCCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaatt                                                                                                                                                      >  2:17473/1‑76 (MQ=39)                                                                       aCCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATcc                                                                             <  2:1253156/149‑1 (MQ=255)                                                                         cGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAg                                                                           >  2:717520/1‑149 (MQ=255)                                                                          gACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGc                                                                          >  1:256649/1‑149 (MQ=255)                                                                           acaaacaaCAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGcc                                                                         >  1:292114/1‑149 (MQ=255)                                                                               acaacaGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCGTCGGGGAGTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATGTTGGTAGGTTAATGTCATGGGAAGATCCAGCCGAcc                                                                     >  1:1103274/1‑149 (MQ=37)                                                                                  acaGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAgg                                                                  <  1:219468/149‑1 (MQ=255)                                                                                       tAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTc                                                             >  1:1061656/1‑149 (MQ=38)                                                                                         aaaCGAAAGGCCCAGTCTTTCGACTGGGCCTGTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGCTCCAGCCGACCAGGCTTTCCa                                                           <  1:196062/149‑1 (MQ=255)                                                                                         aaaCGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCa                                                           >  2:442458/1‑149 (MQ=255)                                                                                          aaCGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATACAGCCGACCAGGCTTTCCAc                                                          >  2:104081/1‑149 (MQ=255)                                                                                                   ctcagtcgaaagACTGGGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTg                                                 >  1:1048091/12‑149 (MQ=255)                                                                                                   cccAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTg                                                 >  1:233935/1‑149 (MQ=255)                                                                                                   cccAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAACACCCAGACGCCCATGCTTTCCACGCCCGCGTg                                                 >  2:604473/1‑149 (MQ=39)                                                                                                       gTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACTCCCGCGTGCCGc                                             >  2:27383/1‑149 (MQ=255)                                                                                                       gTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGc                                             <  2:1190109/149‑1 (MQ=255)                                                                                                          tttCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTcc                                          >  1:60862/1‑149 (MQ=255)                                                                                                          cttCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTcc                                          <  1:673457/148‑1 (MQ=255)                                                                                                              gACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCAAGt                                      >  2:107242/1‑149 (MQ=255)                                                                                                               aCTGTGCCTTTCGTTTTATTTGTTGCCTGGGGAAGTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTc                                     <  1:47342/149‑1 (MQ=255)                                                                                                                cTGAGCCTTTCGTTTTATCTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCg                                    <  1:450258/149‑1 (MQ=255)                                                                                                                  gAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGtt                                  <  2:989303/149‑1 (MQ=255)                                                                                                                   aGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGTAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAAGGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGCGCCGTTCCATGTCGTTc                                 <  2:980203/149‑1 (MQ=255)                                                                                                                         tCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCgg                           <  1:475821/149‑1 (MQ=255)                                                                                                                            ttttATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCCCCATGTCGTTCGCGCGGTtc                        >  2:571494/1‑149 (MQ=255)                                                                                                                            ttttATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCGATTTTTATAGGTTAATGTCAGGGGAGGATCCCGCAGACCAGGAGGTCCACGCCCGCGTGCCGCTCCTAGTAGGTCGCGCGGTtc                        >  2:1128253/1‑149 (MQ=255)                                                                                                                             tttATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTgct                       <  2:749110/149‑1 (MQ=255)                                                                                                                             tttATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAAGCTTTCCACGACCGCGTGAAGCTCAAAGGCGTTCGCCCGGGtct                       >  1:572103/1‑149 (MQ=255)                                                                                                                                aTTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCgg                    >  1:675308/1‑149 (MQ=255)                                                                                                                                 tttGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGGGGTTCTCGGa                   >  2:383308/1‑149 (MQ=255)                                                                                                                                  ttGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATCCGCCTATTTTTCTAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGaa                  <  2:995047/149‑1 (MQ=255)                                                                                                                                  ttGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGaa                  <  1:1065197/149‑1 (MQ=255)                                                                                                                                  ttGATGCCGGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGaa                  <  2:786756/149‑1 (MQ=255)                                                                                                                                        ccTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCTTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACgcgc            <  1:408409/149‑1 (MQ=255)                                                                                                                                          tGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTg          >  1:721824/1‑149 (MQ=255)                                                                                                                                            gggaattgtgaattAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAAcgcggcagc        <  1:401950/149‑6 (MQ=255)                                                                                                                                            gggaattgggaattAATTCTTGAAAACGAAAGGGGCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGcc        >  1:674526/1‑149 (MQ=255)                                                                                                                                               aattgggaattAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTATTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCCCGGAAACCCGCTGcctct     >  2:589638/1‑146 (MQ=255)                                                                                                                                                 ttgggaattAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCCGCGtt   >  1:368780/1‑149 (MQ=255)                                                                                                                                                  tgggaattAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCCGCGttt  >  1:383696/1‑149 (MQ=255)                                                                                                                                                  |                                                                                                                                                     CCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCCGCGTTT  >  CP009273/360141‑360434

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.