| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4522490 | 175 (1.010) | 4 (0.020) | 4/500 | 15.1 | 2.5% | coding (1605/1968 nt) | yjhG | putative dehydratase |
| ? | NC_000913 | = 4522654 | 145 (0.870) | coding (1441/1968 nt) | yjhG | putative dehydratase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CACTCACGGCCTGAAGCATTGCCCATAGCCGGGTATCATCTGGCAATTCAGGATCGGGAAGTAAATCCTGATGGCTGGGTCTGGCATTTAATATTGCAGTTGCCTCCTCCTGTGAAGGTAATTGTTCATCGCTACGGGTTCCGAGGAAATTGACTTCGCCGTGAAGCTCGCGACAATCAATTTTAATTTCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4522204‑4522490‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgagaaaAGTGCGATTTACGATATCAAACATGACAAGATCAAGGCGGGCGATATTCTGGTCATTATTGGCGTTGGACCTTCAGGTACAGGGATGGAAGAAACCTACCAGGTTACCAGTGCCCTGAAGCATCTGTCATACGGTAAGCATGTTTCGTTAATCACCGATGCACGTTTCTCGGGCGTTTCTACTGGCGCGTGCATCGGCCATGTGGGGCCAGAAGCGCTGGCCGGAGGCCCCATCGGTAAATTACGCACCGGGGATTTAATTGAAATTAAAATTG < NC_000913/4522654‑4522381 CACTCACGGCCTGAAGCATTGCCCATAGCCGGGTATCATCTGGCAATTCAGGATCGGGAAGTAAATCCTGATGGCTGGGTCTGGCATTTAATATTGCAGTTGCCTCCTCCTGTGAAGGTAATTGTTCATCGCTACGGGTTCCGAGGAAATTGACTTCGCCGTGAAGCTCGCGACAATCAATTTTAATTTCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCC < 1:675581/281‑1 CTCACGGCCTGAAGCATTGCCCATAGCCGGGTATCATCTGGCAATTCAGGATCGGGAAGTAAATCCTGATGGCTGGGTCTGGCATTTAATATTGCAGTTGCCTCCTCCTGTGAAGGTAATTGTTCATCGCTACGGGTTCCGAGGAAATTGACTTCGCCGTGAAGCTCGCGACAATCAATTTTAATTTCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCG > 1:361763/1‑280 CTCACGGCCTGAAGCATTGCCCATAGCCGGGTATCATCTGGCAATTCAGGATCGGGAAGTAAATCCTGATGGCTGGGTCTGGCATTTAATATTGCAGTTGCCTCCTCCTGTGAAGGTAATTGTTCATCGCTACGGGTTCCGAGGAAATTGACTTCGCCGTGAAGCTCGCGACAATCAATTTTAATTTCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGACGCCCGCGCCAGCAGAAACGCCCG > 2:304095/1‑280 ACGGCCTGAATCATTGCCCATAGCCGGGTATCATCTGGCAATTCAGGATCGGGAAGTAAATCCTGATGGCTGGGTCTGGCATTTAATATTGCAGTTGCCTCCTCCTGTGAAGGTAATTGTTCATCGCTACGGGTTCCGAGGAAATTGACTTCGCCGTGAAGCTCGCGACAATCAATTTTAATTTCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAA < 1:335313/281‑1 ACGGCCTGAAGCATTGCCCATAGCCGGGTATCATCTGGCAATTCAGGATCGGGAAGTAAATCCTGATGGCTGGGTCTGGCATTTAATATTGCAGTTGCCTCCTCCTGTGAAGGTAATTGTTCATCGCTACGGGTTCCGAGGAAATTGACTTCGCCGTGAAGCTCGCGACAATCAATTTTAATTTCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAA < 1:304095/281‑1 CTGAAGCATTGCCCATAGCCGGGTATCATCTGGCAATTCAGGATCGGGAAGTAAATCCTGATGGCTAGGTCTGGCATTTAATATTGCAGTTGCCTCCTCCTGTGAAGGTAATTGTTCATCGCTACGGGTTCCGAGGAAATTGACTTCGCCGTGAAGTTCGCGACAATCAATTTTAATTTCAATTAAATCCCCGGTGAGTAATTTACAGATGGGGCCTCCGGCCAGGGCTTCTGGCCCCAAATGGCCGATGCACGCGCCCGCAG‑AACGCCCGAGAAAAGTGC > 2:1308511/1‑281 AAGCATTGCCCATAGCCGGGTATCATCTGGCAATTCAGGATCGGGAAGTAAATCCTGATGGCTGGGTCTGGCATTTAATATTGCAGTTGCCTCCTCCTGTGAAGGTAATTGTTCATCGCTACGGGTTCCGAGGAAATTGACTTCGCCGTGAAGCTCGCGACAATCAATTTTAATTTCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGCCCAGCGCTTCTGGCCCCACATGGCCGCTGCCGCCGCCAGTAGAAAAGCCCGAGAAAAGGGCct > 2:977242/1‑279 CCGATGCACGCGCCAGTAGAAACGCCCGAGAAAAGTGCGATTTACGATATCAAACATGACAAGATCAAGGCGGGCGATATTCTGGTCATTATTGGCGTTGGACCTT < 1:1364715/106‑1 CCGATGCACGCGCCAGTAGAAACGCCCGAGAAAAGTGCGATTTACGATATCAAACATGACAAGATCAAGGCGGGCGATATTCTGGTCATTATTGGCGTTGGACCTT > 2:1364715/1‑106 CCGAGAAAAGTGCGATTTACGATATCAAACATGACAAGATCAAGGCGGGCGATATTCTGGTCATTATTGGCGTTGGACCTTCAGGTACAGGGATGGAAGAAACCTACCAGGTTACCAGTGCCCTGAAGCATCTGTCATACGGTAAGCATGTTTCGTTAATCACCGATGCACGTTTCTCGGGCGTTTCTACTGGCGCGTGCATCGGCCATGTGGGGCCAGAAGCGCTGGCCGGAGGCCCCATCGGTAAATTACGCACCGGGGATTTAATTGAAATTAAAAT > 1:1448753/1‑280 CCGAGAAAAGTGCGATTTACGATATCAAACATGACAAGATCAAGGCGGGCGATATTCTGGTCATTATTGGCGTTGGACCTTCAGGTACAGGGATGGAAGAAACCTACCAGGTTACCAGTGCCCTGAAGCATCTGTCATACGGTAAGCATGTTTCGTTAATCACCGATGCACGTTTCTCGGGCGTTTCTACTGGCGCGTGCATCGGCC > 1:1631204/1‑207 CCGAGAAAAGTGCGATTTACGATATCAAACATGACAAGATCAAGGCGGGCGATATTCTGGTCATTATTGGCGTTGGACCTTCAGGTACAGGGATGGAAGAAACCTACCAGGTTACCAGTGCCCTGAAGCATCTGTCATACGGTAAGCATGTTTCGTTAATCACCGATGCACGTTTCTCGGGCGTTTCTACTGGCGCGTGCATCGGCC < 2:1631204/207‑1 CCGAGAAAAGTGCGATTTACGATATCAAACATGACAAGATCAAGGCGGGCGATATTCTGGTCATTATTGGCGTTGGACCTTCAGGTACAGGGATGGAAGAAACCTACCAGGTTACCAGTGCCCTGAAGCATCTGTCATACGGTAAGCATGTTTCGTTAATCACCGATGCACGTTTCTCGGGCGTTTCTACTGGCGC < 1:12878/196‑1 CCGAGAAAAGTGCGATTTACGATATCAAACATGACAAGATCAAGGCGGGCGATATTCTGGTCATTATTGGCGTTGGACCTTCAGGTACAGGGATGGAAGAAACCTACCAGGTTACCAGTGCCCTGAAGCATCTGTCATACGGTAAGCATGTTTCGTTAATCACCGATGCACGTTTCTCGGGCGTTTCTACTGGCGC > 2:12878/1‑196 CCGAGAAAAGTGCGATTTACGATATCAAACATGACAAGACCAAGGCGGGCGATATTCTGGTCATTATTGGCGTTGGACCTTCAGGTACAGGGATGGAAGAAACCTACCAGGTTACCAGTGCACTGAAGCATCTGTCATACGGTAAGCATGTTTCGTTAATCACGGATGCCCGTTTCTCGGGCGTTGCTACTGTCGCCTGCATCGGCCATGGGGGGGCCGAAGTGCTTGCCGGATGCCCCCTTGGCAACCTGCGCACAGGGGATTTAtattcaattcaact > 2:563538/1‑266 CGAGAAAAGTGCGATTTACGATATCAAACATGACAAGATCAAGGCGGGCGATATTCTGGTCATTATTGGCGTTGGACCTTCAGGTACAGGGACGGAAGAAACCTACCAGGTTACCAGTGCCCTGAAGCATCTGTCATACGGTAAGCATGTTTCGTTAATAACCGATGCACGTTTCTCGGGCGTTTCTACTGGCGCGTGCATCGGCTATGTTGCGTCACAAGATCTGGCTGGCGGCCCACTCTGTAAATTACGGACCGGGGCTTGAATCTAAATTtagaatt > 2:195293/1‑274 CACTCACGGCCTGAAGCATTGCCCATAGCCGGGTATCATCTGGCAATTCAGGATCGGGAAGTAAATCCTGATGGCTGGGTCTGGCATTTAATATTGCAGTTGCCTCCTCCTGTGAAGGTAATTGTTCATCGCTACGGGTTCCGAGGAAATTGACTTCGCCGTGAAGCTCGCGACAATCAATTTTAATTTCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4522204‑4522490‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgagaaaAGTGCGATTTACGATATCAAACATGACAAGATCAAGGCGGGCGATATTCTGGTCATTATTGGCGTTGGACCTTCAGGTACAGGGATGGAAGAAACCTACCAGGTTACCAGTGCCCTGAAGCATCTGTCATACGGTAAGCATGTTTCGTTAATCACCGATGCACGTTTCTCGGGCGTTTCTACTGGCGCGTGCATCGGCCATGTGGGGCCAGAAGCGCTGGCCGGAGGCCCCATCGGTAAATTACGCACCGGGGATTTAATTGAAATTAAAATTG < NC_000913/4522654‑4522381 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |