New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1070548 =	227 (0.940)	6 (0.030)	6/490	18.8	2.7%	coding (408/591 nt)	rutE	putative malonic semialdehyde reductase
	?	NC_000913	1070576 =	205 (0.870)					coding (380/591 nt)	rutE	putative malonic semialdehyde reductase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TGATGAAATGGGGGCCGACATCAGCTAACTGTTCTCCGGCACGGATCGTGTTTACCCGCACGGCAGAAGGAAAAGAACGTCTGCGCCCGGCACTTTCCAGCGGCAATCTGCAAAAAACCCTGACCGCGCCCGTCACCGCTATCGTCGCCTGGGACAGTGAATTTTATGAACGGTTACCACTACTGTTTCCCCACGGTGATGCCCGCAGTTGGTTTACCTCCAGCCCACAACTTGCCGAAGAAACAGCGTTTCGCAACAGTTCCATGCAGGCGGCCTATCTGATCGTCGCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1070840‑1070548 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcctgcATGGAACTGTTGCGAAACGCTGTTTCTTCGGCAAGTTGTGGGCTGGAGGTAAACCAACTGCGGGCATCACCGTGGGGAAACAGTAG‑‑TGGTAACCGTTCATAAAATTCACTGTCCCAGGCGACGATAGCGGTGACGGGCGCGGTCAGGGTTTTTTGCAGATTGCCGCTGGAAAGTGCCGGGCGCAGACGTTCTTTTCCTTCTGCCGTGCGGGTAAACACGATCCGTGCCGGAGAACAGTTAGCTGATGTCGGCCCCCATTTCATCAGGGCATAAATCTCCCGTAACG  >  NC_000913/1070576‑1070861                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TGATGAAATGGGGGCCGACATCAGCTAACTGTTCTCCGGCACGGATCGTGTTTACCCGCACGGCAGAAGGAAAAGAACGTCTGCGCCCGGCACTTTCCAGCGGCAATCTGCAAAAAACCCTGACCGCGCCCGTCACCGCTATCGTCGCCTGGGACAGTGAATTTTATGAACGGTTACCACTACTGTTTCCCCACGGTGATGGCCGCAGTTGGTTTACCTCCAGCCCACAACTTGCCGAAGAAACAGCGTTTCGCCACAGGTCCATGCAGGCGGCCTATCTGATCGTCc                                                                                                                                                                                                                                                                                                       >  2:1711609/1‑287   ATGAAATGGGGGCCGACATCAGCTAACTGTTCTCCGGCACGGATCGTGTTTACCCGCACGGCAGAAGGAAAAGAACGTCTGCGCCCGGCACTTTCCAGCGGCAATCTGCAAAAAACCCTGACCGCGCCCGTCACCGCTATCGTCGCCTGGGACAGTGAATTTTATGAACGGTTACCACTACTGTTTCCCCACGGTGATGCCCGCAGTTGGTTTACCTCCAGCCCACAACTTGCCGAAGAAACAGCGTTTCGCAACAGTTCCATGCAGGCGTCCTATCTGATCGTCG                                                                                                                                                                                                                                                                                                       >  1:2286860/1‑286   ATGAAATGGGGGCCGACATCAGCTAACTGTTCTCCGGCACGGATCGTGTTTACCCGCACGGCAGAAGGAAAAGAACGTCTGCGCCCGGCACTTTCCAGCGGCAATCTGCAAAAAACCCTGACCGCGCCCGTCACCGCTATCGTCGCCTGGGACAGTGAATTTTATGAACGGTTACCACTACTGTTTCCCCACGGTGATGCCCGCAGTTGGTTTACCTCCAGCCCACAACTTGCCGAAGAAACAGCGTTTCGCAACAGTTCCATGCAGGCGGCCTATCTGATCGTCG                                                                                                                                                                                                                                                                                                       >  2:15039/1‑286             GGCCGACATCAGCTAACTGTTCTCCGGCACGGATCGTGTTTACCCGCACGGCAGAAGGAAAAGAACGTCTGCGCCCGGCACTTTCCAGCGGCAATCTGCAAAAAACCCTGACCGCGCCCGTCACCGCTATCGTCGCCTGGGACAGTGAATTTTATGAACGGTTACCACTACTGTTTCCCCACGGTGATGCCCGCAGTTGGTTTACCTCCAGCCCACAACTTGCCGAAGAAACAGCGTTTCGCAACAGGTCCATGCAGGCGGCCTATCTGCTCGTCGCCTGCATGGAACg                                                                                                                                                                                                                                                                                          >  1:2132383/1‑288                                                 TGTTTACCCGCACGGCAGAAGGAAAAGAACGTCAGCGCCCGGCACATTCCAGCGGCAATCTGCAAAAAACCCTGACCGCGCCCGTCACCGCTATCGTCGCCTGGAACAGTGAATTTTATGAACGGTGACCACTACTGTTTCCCCACGGTGATGCCCGCAGTTGGTTTACCTCCAGCCCACAACTTGCCGAAGAAACAGCGTTTCGCAACAGTTCCATGCAGGCGGCCTATCTGATCGTCGCCTGCATGGAACTGTTGCGAAACGCTGTTTCT                                                                                                                                                                                                                                                                       <  1:164262/272‑1                                                  GTTTACCCCAACGGCAGAACGAAATGAACGGCTGCGCCCGGCACTTGCCCGCGGCAAGCTGCAAAAAACCCTGACCTCGCCCGTCACCGCTATCGGCGCCTGGGACAGTGAAGTTTATGAACGGTTACCACTACTGTTTCCCCACGGTGATGCCCGCAGTTGGTTTACCCCCAGCCCACAACTTGCCGAAGAAACCGCGTTTCGCAACAGTTCCATGCAGGCGGCCTATCTGATCGTCGCCTGCATGGAACTGTTGCGAAACGCTGTTTCTTCGGCAAGTTGTGGGCTG                                                                                                                                                                                                                                                     <  2:2132383/289‑1                                                           CACGGCAGAAGGAAAAGAACGTCTGCGCCCGGCACTTTCCAGCGGCAATCTGCAAAAAACCCTGACCGCGCCCGTCACCGCTATCGTCGCCTGGGACAGTGAATTTTATGAACGGTTACCACTACTGTTTCCCCACGGTGATGCCCGCAGTTGGTTTACCTCCAGCCCCCAACTTGCCGAAGCAACAGCGTTTCGCAACAGTCCCATGCAGGCGGCCTATCTGATCGTCGCCTGCCTGGAATTGTTGCGAACCGCTGTTTTTTCCGCAAGTT                                                                                                                                                                                                                                                             >  2:164262/1‑272                                                                                gctggcCCCTGCACTTTCCGGCGGCAAGTCGCAAGAAACCCTCGCCGCGCCCGGCACCGCTGTCGTCGCCCGGGAAAGTGAATTTGATGAACGGTGACCACTACTGTTTCCCCACGGTGATGCCCGCAGTGGGTTTACCTCCAGCCCACAACTTGCCGAAGAAACAGCGTTTCGCAACAGTTCCATGCAGGCGGCCTATCTGATCGTCGCCTGCATGGAACTGTTGCGAAACGCTGTTTCTTCGGCAAGTTGTGGGCTGGAGGTAAACCAACTGCGGGCATCACCGTGG                                                                                                                                                                                                                       <  2:232740/283‑1                                                                                   GCGCACGGTCCTGTCCAGCGGCAATCTGCAAAAAACCCCGACCGCGCCCTGCACCGCTAGCGTCGCCTGGGACAGTGAATTTTATGAACGGTTACCACTACTGTTTCCCCACGGTTATGCCCGAAGTTGGTTTACCTCCAGCCCACAACTGGCCGAAGAAACAGCGTTTCGCAACAGTTCCATGCGGGCGGCCTATCTGATCGTCGCCTGCATGGAACTGTTGCGAAACGCTGTTTCTTCGGCAAGTTGTGGGCTGGAGGTAAACCAACTGCGGGCATCACCGTGGGGA                                                                                                                                                                                                                    <  2:172299/289‑1                                                                                                                                                                                                                                                                                                GCCTGCATGGAACTGTTGCGAAACGCTGTTTCTTCGGCAAGTTGTGGGCTGGAGGTAAACCAACTGCGGGCATCACCGTGGGGAAACAGTAG‑‑TGGTAACCGTTCATAAAATTCACTGTCCCAGGCGACGATAGCGGTGACGGGCGCGGTCAGGGTTTTTTGCAGATTGCCGCTGGAAAGTGCCGGGCGCAGACGTTCTTTTCCTTCTGCCGTGCGGGTAAACACGATCCGTGCCGGAGAACAGTTAGCTGATGTCGGCC                                   <  1:2330888/259‑1                                                                                                                                                                                                                                                                                                GCCTGCATGGAACTGTTGCGAAACGCTGTTTCTTCGGCAAGTTGTGGGCTGGAGGTAAACCAACTGCGGGCATCACCGTGGGGAAACAGTAG‑‑TGGTAACCGTTCATAAAATTCACTGTCCCAGGCGACGATAGCGGTGACGGGCGCGGTCAGGGTTTTTTGCAGATTGCCGCTGGAAAGTGCCGGGCGCAGACGTTCTTTTCCTTCTGCCGTGCGGGTAAACACGATCCGTGCCGGAGAACAGTTAGCTGATGTCGGCC                                   >  2:2330888/1‑259                                                                                                                                                                                                                                                                                                 CCTGCATGGAACTGTTGCGAAACGCTGTTTCTTCGGCAAGTTGTGGGCTGGAGGTAAACCAACTGCGGGCATCACCGTGGGGAAACAGTAGGTTGGTAACCGTTCATAAAATTCACTGTCCCAGGCGACGATAGCGGTGACGGGCGCGTTCAGGGTTTTTTGCAGATTGCCGCTGGAAAGTGCCGGGCGCAGACGTTCTTTTCCTTCTGCCGTGCGGGAAAACACGACCCGGGCCGGAGAACCGTTAGATGATGTCGGCCCCCATTTCATCCGGGCATAAAcccgttc       >  2:1401184/1‑281                                                                                                                                                                                                                                                                                                 CCTGCATGGAACTGTTGCGAAACGCTGTTTCTTCGGCAAGTTGTGGGCTGGAGGTAAACCAACTGCGGGCATCACCGTGGGGAAACAGTAG‑‑TGGTAACCGTTCATAAAATTCACTGTCCCAGGCGACGATAGCGGTGACGGGCGCGGTCAGGGTTTTTTGCAGATTGCCGCTGGAAAGTGCCGGGCGCAGACGTTCTTTTCCTTCTGCCGTGCGGGTAAACCCGATCCGTGCCGGAGAACAGTTAGCTGATGTCGGCCCCCATTTCATCAGGGCATAAATCTCCCGTA     >  1:955382/1‑288                                                                                                                                                                                                                                                                                                 CCTGCATGGAACTGTTGCGAAACGCTGTTTCTTCGGCAAGTTGTGGGCTGGAGGTAAACCAACTGCGGGCATCACCGTGGGGAAACAGTAG‑‑TGGTAACCGTTCATAAAATTCACTGTCCCAGGCGACGATAGCGGTGACGGGCGCGGTCAGGGTTTTTTGCAGATTGCCGCTGGAAAGTGCCGGGCGCAGACGTTCTTTTCCTTCTGCCGTGCGGGTAAACACGATCCGTGCCGGAGAACCGTTTGCTGATGTCCGCCCCCATTTCAGCAGGGCATAAACCCCCCGTAA    >  2:1035611/1‑289                                                                                                                                                                                                                                                                                                 CCTGCATGGAACTGTTGCGAAACGCTGTTTCTTCGGCAAGTTGTGGGCTGGAGGTAAACCAACTGCGGGCATCACCGTGGGGAAACAGTAG‑‑TGGTAACCGTTCATAAAATTCACTGTCCCAGGCGACGATAGCGGTGACGGGCGCGGTCAGGGTTTTTTGCAGATTGCCGCTGGAAAGTGCCGGGCGCAGACGTTCTTTTCCTTCTGCCGTGCGGGTAAACACGATCCGTGCCGGAGAACAGT                                                  <  2:238199/243‑1                                                                                                                                                                                                                                                                                                 CCTGCATGGAACTGTTGCGAAACGCTGTTTCTTCGGCAAGTTGTGGGCTGGAGGTAAACCAACTGCGGGCATCACCGTGGGGAAACAGTAG‑‑TGGTAACCGTTCATAAAATTCACTGTCCCAGGCGACGATAGCGGTGACGGGCGCGGTCAGGGTTTTTTGCAGATTGCCGCTGGAAAGTGCCGGGCGCAGACGTTCTTTTCCTTCTGCCGTGCGGGTAAACACGATCCGTGCCGGAGAACAGT                                                  >  1:238199/1‑243                                                                                                                                                                                                                                                                                                 CCTGCATGGAACTGTTGCGAAACGCTGTTTCTTCGGCAAGTTGTGGGCTGGAGGTAAACCAACTGCGGGCATCACCGTGGGGAAACAGTAG‑‑TGGTAACCGTTCATAAAATTCACTGTCACAGGCGACGATAGCGGTGACGGGCGCGGTCAGGGTTTTTTGCAGATTGCCGCTGGAAAGTGCCGGGCGCAGACGTTCTTTTCCTTCTGCCGTCCGGGTAAACACGATCAGTCACGGAGACCACTTAGCTGACGTCGGCCCCACTTTCCTCAGCGCTAAAATTTCCCGac     >  2:1443602/1‑286                                                                                                                                                                                                                                                                                                   TGCATGGAACTGTTGCGAAACGCTGTTTCTTCGGCAAGTTGTGGGCTGGAGGTAAACCAACTGCGGGCATCACCGTGGGGAAACAGTAG‑‑TGGTAACCGTTCATAAAATTCACTGTCCCAGGCGACGATAGCGGTGACGGGCGCGGTCAGGGTTTTTTGCAGATTGCCGCTGGAAAGTGCCGGGCGCAGACGTTCTTTTCCTTCTGCCGTGCGGGTAAACACGATCCGTGCCGGAGAACAGTTAGCTGATGTCGGCCCCCATTTCATCAGGGCATAAATCTCCCGTAACG  >  1:723121/1‑289                                                                                                                                                                                                                                                                                                   TGCATGGAACTGTTGCGAAACGCTGTTTCTTCGGCAAGTTGTGGGCTGGAGGTAAACCAACTGCGGGCATCACCGTGGGGAAACAGTAG‑‑TGGTAACCGTTCATAAAATTCACTGTCCCAGGCGACGATAGCGGTGACGGGCGCGGTCAGGGTTTTTTGCAGATTGCCGCTGGAAAGTGCCGGGCGCAGACGTTCTTTTCCTTCTGCCGTGCGGGTAAACACGATCCGTGCCGGAGAACAGTTAGCTGATGTCGGCCCCCATTTCATCAGGG                    <  2:1612293/271‑1                                                                                                                                                                                                                                                                                                   TGCATGGAACTGTTGCGAAACGCTGTTTCTTCGGCAAGTTGTGGGCTGGAGGTAAACCAACTGCGGGCATCACCGTGGGGAAACAGTAG‑‑TGGTAACCGTTCATAAAATTCACTGTCCCAGGCGACGATAGCGGTGACGGGCGCGGTCAGGGTTTTTTGCAGATTGCCGCTGGAAAGTGCCGGGCGCAGACGTTCTTTTCCTTCTGCCGTGCGGGTAAACACGATCCGTGCCGGAGAACAGTTAGCTGATGTCGGCCCCCATTTCATCAGGG                    >  1:1612293/1‑271                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TGATGAAATGGGGGCCGACATCAGCTAACTGTTCTCCGGCACGGATCGTGTTTACCCGCACGGCAGAAGGAAAAGAACGTCTGCGCCCGGCACTTTCCAGCGGCAATCTGCAAAAAACCCTGACCGCGCCCGTCACCGCTATCGTCGCCTGGGACAGTGAATTTTATGAACGGTTACCACTACTGTTTCCCCACGGTGATGCCCGCAGTTGGTTTACCTCCAGCCCACAACTTGCCGAAGAAACAGCGTTTCGCAACAGTTCCATGCAGGCGGCCTATCTGATCGTCGCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1070840‑1070548 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcctgcATGGAACTGTTGCGAAACGCTGTTTCTTCGGCAAGTTGTGGGCTGGAGGTAAACCAACTGCGGGCATCACCGTGGGGAAACAGTAG‑‑TGGTAACCGTTCATAAAATTCACTGTCCCAGGCGACGATAGCGGTGACGGGCGCGGTCAGGGTTTTTTGCAGATTGCCGCTGGAAAGTGCCGGGCGCAGACGTTCTTTTCCTTCTGCCGTGCGGGTAAACACGATCCGTGCCGGAGAACAGTTAGCTGATGTCGGCCCCCATTTCATCAGGGCATAAATCTCCCGTAACG  >  NC_000913/1070576‑1070861

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.