New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2442521 =83 (0.760)6 (0.060) 6/510 9.5 6.4% coding (758/2007 nt) mnmC fused 5‑methylaminomethyl‑2‑thiouridine‑forming enzyme methyltransferase and FAD‑dependent demodification enzyme
?NC_000913 2442624 = 95 (0.900)coding (861/2007 nt) mnmC fused 5‑methylaminomethyl‑2‑thiouridine‑forming enzyme methyltransferase and FAD‑dependent demodification enzyme
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CGCACCAGTCATGATCAAATTTAACGGGTAATTGGTCGTAAAACCGACGAGCAAAAGTAAACGCATTAGAGAAAAAGCGGTTTAGCGCCTCATCGTGTTTGCTTAATAACGGATACAGCGCCCCCTGGCGATTGCCGGAAGCACCCAGTGCGGGGGCCTCATCCGCGCAATAAAGCGTTACCTGCCAGCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2442811‑2442521
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggcgcggCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCAGGGGGCGCTGTATCCGTTATTAAGCAAACACGATGAGGCGCTAAACCGCTTTTTCTCTAATGCGTTTACTTTTGCTCGTCGGTTTTACGACCAATTACCCGTTAAATTTGATCATGACTGGTGCGGCGTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCAATGGATTTACCCGCAGAACTGGCTGTAGCCGTTGA  >  NC_000913/2442624‑2442905
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
CGCACCAGTCATGATCAAATTTAACGGGTAATTGGTCGTAAAACCGACGAGCAAAAGTAAACGCATTAGAGAAAAAGCGGTTTAGCGCCTCCTCGTGTTTGCTTAATAACGGATACAGCGCCCCCTGGCGATTCCCGGAAGCACCCAGCGCGGGGGCCCCATCCGCGCAATAAAGCGTTACCTGCCAGCCGAGCCGTAATAGCGCCAGCGACACCAACGCACTGGCAATACCCCCCCCGATAAACGCCGCTCCCCGTTTCCTGTTTCCAGTGCGGGTAAACCA                                                                                                                                                                                                                                                                                                    >  2:970757/1‑283
 gaACCAGTCATGATCAAATTTAACGGGTAATTGGTCGTAAAACCGACGAGCAAAAGTAAACGCATTAGAGAAAAAGCGGTTTAGCGCCTCATCGTGTTTGCTTAATAACGGATACAGCGCCCCCTGGCGATTGCCGGAAGCACCCAGTGCGGGGGCCTCATCCGCGCAATAAAGCGTTACCTGCCAGCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCA                                                                                                                                                                                                                                                                                                    <  1:944312/280‑1
  CACCAGTCATGATCAAATTTAACGGGTAATTGGTCGTAAAACCGACGAGCAAAAGTAAACGCATTAGAGAAAAAGCGGTTTAGCGCCTCATCGTGTTTGCTTAATAACGGATACAGCGCCCCCTGGCGATTGCCGGAAGCACCCAGTGCGGGGGCCTCATCCGCGCAATAAAGCGTTACCTGCCAGCCGCGCCGTAATAGCGCCAGCGACCACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACG                                                                                                                                                                                                                                                                                                  >  1:64267/1‑283
     CAGTCATGTTCAAATTTAACGTGACATTGGTCGTAAACCCGACGAGCAACAGTAAACGCATTAACGAAAAAGCGGTTTAGCGCCTCATCGTGTTTGCTTAAAAACGGATACAGCGCCCCCTGGCGATTGCCGGAAGCACCCAGTGCGGGGGCCTCATCCGCGCAATAAAGCGTTACCTGCCAGCCGCGCCGTAATAGCGCCGGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCG                                                                                                                                                                                                                                                                                               <  1:202153/283‑1
     CAGTCATGATAAAATTTAACGGGTAATTGGTCGTAAAACCGACGAGCAAAAGTAAACGCAGTAGAGAAAAAGCGGTTTAGCGCCTCATCGTGTTTGCGTAAGAACGGATACAGCGCCCCCTGGCGATTGCCGGAAGCACCCAGTGCGGGGGCCTCATCCGCGCAATAAAGCGTTACCTGCCAGCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCG                                                                                                                                                                                                                                                                                               <  1:406585/283‑1
       GTCATGATCAAATTTAACGGGTAATTGGTCGTAAAACCGACGAGCAAAAGTAAACGCATTAGAGAAAAAGCGGTTTAGCGCCTCATCGTGTTTGCTTAATAACGGATACAGCGCCCCCTGGCGATTGCCGGAAGCACCCAGTGCGGGGGCCTCATCCGCGCAATAAAGCGTTACCTGCCAGCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCG                                                                                                                                                                                                                                                                                             <  1:654791/283‑1
       GTCATGATCAAATTTAACGGGTAATTGGTCGTAAAACCGACGAGCAAAAGTAAACGCATTAGAGAAAAAGCGGTTTAGCGCCTCATCGTGTTTGCTTAATAACGGATACAGCGCCCCCTGGCGATTGCCGGAAGCACCCAGTGCGGGGGCCTCATCCGCGCAATAAAGCGTTACCTGCCAGCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCG                                                                                                                                                                                                                                                                                             <  1:1017738/283‑1
       GTCAGGAACAAATTGAACGGGGAATTGGGCGGAAAACCGACGAGCAAAAGTAAACGCATAAGGGAAAAAGCGGTTTAGCGCCTAATCGGGTTTGCTTAATAACGGAAACAGCGCCCCCTGGCGATTGCCGGAAGCACCCAGTGCGGGGGCCTCATCCGCGCAATAAAGCGTTACCTGCCAGCCGCGCCGTAATAGGGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCG                                                                                                                                                                                                                                                                                             <  1:453463/283‑1
          ATGATCAAATTTAACGGGTAATTGGTCGTAAAACCGACGAGCAAAAGTAAACGCATTAGAGAAAAAGCGGTTTAGCGCCTCATCGTGTTTGCTTAATAACGGATACAGCGCCCCCTGGCGATTGCCGGAAGCACCCAGTGCGGGGGCCTCATCCGCGCAATAAAGCGTTACCTGCCAGCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTTCGGTTAAACCACGGGGCGGCg                                                                                                                                                                                                                                                                                          >  1:349240/1‑282
                AAATTTAACGGTTAATAGGTCGTAAAACCGACGATCAAAAGTAAACGCATTAGAGAAAAAGCGGTTTAGCGCCCCTTCGTGTTTGCTTAATAACGGTTACCGCGCCCCCTGCCGACGGCCGGAAGCACCCAGTGCGGGGGCCTCATCCGCGCAATAAAGCGTTACCTGCCAGCCGCGCCGTAATAGCGCCAGCGACACCAACGCGCTTGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGCTGGCAGG                                                                                                                                                                                                                                                                                    <  1:879020/283‑1
                          gtTAATTGGCAGTAAAACCGTCGAGCAAAAGTAAACGCATTAGAGAAAAAGCGGTTTAGCGCCTACTCTTGTTTGCTTAATACCGGATACAGCCCCGCCTGGCGAGTGCCGGAAGCACCCAGTGCGGGGGCCTCATCCGCGCAATAAAGCGTTACCTGCCAGCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGCTGGCAGGTAACGCTTTA                                                                                                                                                                                                                                                                          <  1:443583/281‑1
                                                 agaAAAAGTAAAACAATTAGAGAAAAAGCGGTTTAGCGCGTCATCGTGTTTGCTTAATAACGGATACAGCGCCCCCTGGCGATTGCCGGAAGCACCCAGTGCGGGGGCCTCATCCGCGCAATAAAGCGTTACCTGCCAGCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCAC                                                                                                                                                                                                                                                   <  1:921907/280‑1
                                                                                                                                                                                                                                          CGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCAGGGGGCGCTGTATCCGTTATTAAGCAAACACGATGAGGCGCTAAACCGCTTTT                                                                                                                                                                        <  1:735910/173‑1
                                                                                                                                                                                                                                          CGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCAGGGGGCGCTGTATCCGTTATTAAGCAAACACGATGAGGCGCTAAACCGCTTTT                                                                                                                                                                        >  2:735910/1‑173
                                                                                                                                                                                                                                                                                             GCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCAGGGGGCGCTGTATCCGTTATTAAGCAAACACGATGAGGCGCTAAACCGCTTTTTCTCAAATGCGTTTACTTTTGATAGTCGGTTTTACGAACAATTACCCGATAAATTTGATCATGACTGGTGCGGCGTCACGAAGTTAGGATGGGATGAGAAAAGACAGCATAAAATCGCACAGATGCTGTCAATGGATTTACCCGCAGAACTGGCTGTAGCC       >  1:10117/1‑283
                                                                                                                                                                                                                                                                                                  GCTGGCAGGTAACGCTTTATTGCGCGGCTGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCAGGGGGCGCTGTATCCGTTATTAAGCAACCACGATGAGGCGCTAAACCGCTTTTTCTCTAATGCGTTTACTTTTGCTCGTCGGTTTTACGACCAATTAACCGTTAAATTTGATCATGACTGGGGCGGCGTCACGCAGTTAGGCGGGGATGAGCAAAGCCACCCTAAAATTCCACAGATGTTTCTACTGGAATTACCCGCAAAACGGGCCGTAGCCGTTGc  >  2:816465/1‑282
                                                                                                                                                                                                                                                                                                  GCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCAGGGGGCGCTGTATCCGTTATTAAGCAAACACGATGAGGCGCTAAACCGCTTTTTCTCTAATGCGTTTACTTTTGCTCGTCGGTTTTACGACCAATTACCCGTTAAATTTGATCATGACTGGTGCGGCGTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCAATGGATTTACCCGCAGAACTGGCTGTAGCCGTTGA  >  2:1008925/1‑283
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
CGCACCAGTCATGATCAAATTTAACGGGTAATTGGTCGTAAAACCGACGAGCAAAAGTAAACGCATTAGAGAAAAAGCGGTTTAGCGCCTCATCGTGTTTGCTTAATAACGGATACAGCGCCCCCTGGCGATTGCCGGAAGCACCCAGTGCGGGGGCCTCATCCGCGCAATAAAGCGTTACCTGCCAGCCGCGCCGTAATAGCGCCAGCGACAACAACGCGCTGGCAATACCACCGCCGATAATCGCCGCTTCCCGTTTGCTGCTGCCCGTGCGGTTAAACCACGGCGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2442811‑2442521
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggcgcggCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCAGGGGGCGCTGTATCCGTTATTAAGCAAACACGATGAGGCGCTAAACCGCTTTTTCTCTAATGCGTTTACTTTTGCTCGTCGGTTTTACGACCAATTACCCGTTAAATTTGATCATGACTGGTGCGGCGTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCAATGGATTTACCCGCAGAACTGGCTGTAGCCGTTGA  >  NC_000913/2442624‑2442905

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.