| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1060593 = | 105 (0.780) | 3 (0.020) | 3/476 | NT | 2.8% | coding (1338/2547 nt) | torA | trimethylamine N‑oxide (TMAO) reductase I, catalytic subunit |
| ? | NC_000913 | = 1060589 | 102 (0.780) | coding (1334/2547 nt) | torA | trimethylamine N‑oxide (TMAO) reductase I, catalytic subunit | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGCCGTACTGGTCGAGATCGTTACGCTCAAACTGCGTGGTCGCAGGCAGTACGATATCGGCAAAGCGGCAGGTTGAGGTCCACTGGTTATCTATGGCGATAACCGTTTCCAGCTTGCGCAAGCCTTCAATAATGCGGTTGATCTGCTGATGGCGATGGAATGGGTTAGTTCCGGCAAAAATACACATTTTCAGCGGCGGCAGTTTTACCGATTTACCGTTCCAGTTGATCACTTTCCCCGGTTCGAGGATCGCATCGATAAAACGGGCAATCGGAATAGTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1060876‑1060593‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgTAGCCTTTGTAGTCACTGTTGTCGTGAACAGGCGGAATCGACGTAGAGCCGGAGAAACCACTCAGAATAACGCCTTTACGCCCCGGCGTGCCTGCGCCGTTGTAGTGCCAGCCAAAACCAAAACCACCACCTGGCAGGCCAATTTGCCCCAGCATCGCCGCCAGAACCACAATCATCCACGCCCACTGTTCACCGTGCTGCATACGCTGCACGCACCAGCCAGCAATAATTTGCGTTCTGTTCGCCGCCATCTGCCGCGCCAGCCCACGAATGGTTTC < NC_000913/1060589‑1060312 ttCCGTACTGGTCGAGATCCTTACGCTCAAACTCCGTGGTCGCAGGCACTACGATATCGGTAAAGCGGCAGGTTGAGGTCCACTGGTTATCTATGGCGATAACCGTTTCCAGCTTGGGCAAGCCTTCAATAATGCGGTTGATCTGCTGATGGCGATGGAATGGGTTAGTTCCGGCAAAAATACACATTTTCAGCGGCGGCAGTTTTACCGATTTACCGTTCCAGTTGATCACTTTCCCCGGTTCGAGGATCGCATCGATAAAACGGGCAATCGGAATAGTG < 1:1351371/279‑1TGCGGTACTGGTCGAGATCGTTACGCTCAAACTGCGTGGTCGCAGGCAGTACGATATCGGCAAAGCGGCAGGTTGAGGTCCACTGGTTATCTATGGCGATAACCGTTTCCAGCTTGCGCAAGCCTTCAATAATGCGGTTGATCTGCTGATGGCGATGGAATGGGTTAGTTCCGGCAAAAATACACATTTTCAGCGGCGGCAGTTTTACCGATTTACCGTTCCAGTTGATCACTTTCCCCGGTTCGAGGATCGCATCGATAAAACGGGCAATCGGAATAGTG < 1:289218/281‑1TGCCGTACTGGTCTAGATCGTTACGCTCAAACTGCGTGGTCGCAGGCAGTACGATATCGGCAAAGCGGCAGGTTGAGGTCCACTGGTTATCTATGGCGATAACCGTTTCCAGCTTGCGCAAGCCTTCAATAATGCGGTTGATCTGCTGATGGCGATGGAATGGGTTAGTTCCGGCAAAAATACACATTTTCAGCGGCGGCAGTTTTACCGATTTACCGTTCCAGTTGATCACTTTCCCCGGTTCGAGGATCGCATCGATAAAACGGGCAATCGGAATAGTG < 1:150655/281‑1 gccgacaTGGTCGGGATGGTTACCCTCAAACTGGGTGGGTGCAGGCAATACGATATCGGCAAGGCGGCAGGTTGAGGTCCACTGGTTATCTATGGCGATAACCGTTTCCAGCTTGCGCAAGCCTTCAATAATGCGGTTGATCTGCTGATGGCGATGGAATGGGTTAGTTCCGGCAAAAATACACATTTTCAGCGGCGGCAGTTTTACCGATTTACCGTTCCAGTTGATCACTTTCCCCGGTTCGAGGATCGCATCGATAAAACGGGCAATCGGAATAGTG < 2:237172/273‑1 GTCGAGATCGTTACGCTCAAACTGCGTGGTCGCAGGCAGTACGATATCGGCAAAGCGGCAGGTTGAGGTCCACTGGTTATCTATGGCGATAACCGTTTCCAGCTTGCGCAAGCCTTCAATAATGCGGTTGATCTGCTGATGGCGATGGAATGGGTTAGTTCCGGCAAAAATACACAGTTTCAGCGGCGGCAGTTTTACCGATTTACCGTTCCAGTTGATCACTTTCCCCGGTTCGAGGATCGCATCGCTAAAACGGGCAATCGGCACAGTGCTGagttagc > 2:944996/1‑274 TCCAGCTTGCGCAAGCCTTCAATAATGCGGTTGATCTGCTGATGGCGATGGAATGGGTTAGTTCCGGCAAAAATACACATTTTCAGCGGCGGCAGTTTTACCGATTTACCGTTCCAGTTGATCACTTTCCCCGGCTCGAGGATCGCAACGATAAAACGGGCAATCGGAATAGTGCTGTAGCCTTTGTAGTCACTGTTGTCGTGAACAGGCGGAATCGACGTAGAGCCGGAGAAACCACTCACAGTAACGCCTTTCCCCCCCGGCGTGCCTGCGCCGTCGT > 1:816702/1‑280 GCAAAAATACACATTTTCAGCGGCGGCAGTTTTACCGATTTACCGTTCCAGTTGATCACTTTCCCCGGTTCGAGGATCGCATCGATAAAACGGGCAATCGGAATAGTGCTGTAGCCTTTGTAGTCACTGTTGTCGTGAACAGGCGGAATCGACGTAGAGCCGGAGAAACCACTCAGAATAACGCCTTTACGCCCCGGCGTGCCTGCGCCGTTGTAGCGCCAGCCAAAACCAAAACCACCAACTGGCAGGCCAATTTGCCCCAGCACCCCCGCCAGAACCc > 2:1220110/1‑279 TTTTGCCGATTTACCGTTCCAGTTGATCACTTTCCCGGGTTCGAGGATCGCATCGATACAACGGGCAATCGGAATAGTGCTGTAGCCGTTGTAGTCACTGTTGTCGTGAACAGGCGGAATCGGCGTAGGGCCGGAGAAACCACCCAGAAAACCGCCTTTACGCCCCGGCGTGCCTGCGCCGTTGGAGGGCCAGCCAAAACCAAAACCACCACCTGGCAGGCCAATTTGCCCCAGCATCGCCGCCAGAACCACAATCGTCCACGCCCACTGTTCACCGT < 2:816702/278‑1 CTGTAGCCTTTGTAGTCACTGTTGTCGTGAACAGGCGGAATCGACGTAGAGCCGGAGAAACCACTCAGAATAACGCCTTTACGCCCCGGCGTGCCTGCGCCGTTGTAGTGCCAGCCAAAACCAAAACCACCACCTGGCAGGCCAATTTGCCCCAGCATCGCCGCCAGAACCACAATCATCCACGCCCACTGTTCACCGTGCTGCATACGCTGCACGCACCAGCCAGCAATAATTTGCGTTCTGTTCGCCGCCATCTGCCGCGCCAGCCCACGAATGGTTTC > 1:1197132/1‑281 TGCCGTACTGGTCGAGATCGTTACGCTCAAACTGCGTGGTCGCAGGCAGTACGATATCGGCAAAGCGGCAGGTTGAGGTCCACTGGTTATCTATGGCGATAACCGTTTCCAGCTTGCGCAAGCCTTCAATAATGCGGTTGATCTGCTGATGGCGATGGAATGGGTTAGTTCCGGCAAAAATACACATTTTCAGCGGCGGCAGTTTTACCGATTTACCGTTCCAGTTGATCACTTTCCCCGGTTCGAGGATCGCATCGATAAAACGGGCAATCGGAATAGTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1060876‑1060593‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgTAGCCTTTGTAGTCACTGTTGTCGTGAACAGGCGGAATCGACGTAGAGCCGGAGAAACCACTCAGAATAACGCCTTTACGCCCCGGCGTGCCTGCGCCGTTGTAGTGCCAGCCAAAACCAAAACCACCACCTGGCAGGCCAATTTGCCCCAGCATCGCCGCCAGAACCACAATCATCCACGCCCACTGTTCACCGTGCTGCATACGCTGCACGCACCAGCCAGCAATAATTTGCGTTCTGTTCGCCGCCATCTGCCGCGCCAGCCCACGAATGGTTTC < NC_000913/1060589‑1060312 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |