New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4532138142 (1.520)3 (0.030) 3/488 9.3 2.5% pseudogene (173/261 nt) yjhY pseudogene, zinc finger protein family
?NC_000913 = 4532518 98 (1.080)coding (666/747 nt) yjhP putative methyltransferase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ACGCGGTAACTGTTATAGCACCACTTTGTTGCAGGACGCTCCCTCTTCATTACGTCCTGCACGTGGATACCCCAGCATCTCCATCAGCGGATCTTAGAATGTAATGGCGCGTGGCAGGTCGTTGGTTCCCAGCATAATGTAAGAAAACATCGGATCTCCTGAATAGATTCAGAGGGAGTATAGATAATCAGCTCAAATCACTCTCCGCTTTATGAGCCCAGGCTGGCATTGCCGTCAGATAACGTTTTGCACGCTTATGTGCTTCCTCCGGGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4531863‑4532138
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggccgaACTAAACATCGCGCCGAAACGCTACGTGACCTACGCGCGGGAATGCTTTGGCTGGGGCGTGTTCGCACTCATCGCCCGGTAACAACAGGTTCCCGGTATTTCTGGCTGGAAATATCGAGGCTTTACCTTTGCTTTGATCTGATGTATCACCTGCACAATACATATTCAGTATGTTTATTAATCAAGATGTCACCATAAGGAGCATCATATGTCACAACATGAACAGTTCTGTCAGGCTTGCGGAATGCCGATGTCGGCACCAGATGCACACAGT  <  NC_000913/4532518‑4532245
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
ACGCGGTAACTGTTATAGCACCACTTTGTTGCAGGACGCTCCCTCTTCATTACGTCCTGCACGTGGATACCCCAGCATCTCCATCAGCGGATCTTAGAATGTAATGGCGCGTGGCAGGTCGTTGGTTCCCAGCATAATGTAAGAAAACATCGGATCTCCTGAATAGATTCAGAGGGAGTATAGATAATCAGCTCAAATCACTCTCCGCTTTATGAGCCCAGGCTGGCATTGCCGTCAGATAACGTTTTGCACGCTTATGTGCTTCCTCCGGGCCG                                                                                                                                                                                                                                                                                     >  1:826110/1‑275
                                                                                                                                                                           GAGGGAGTATAGATAATCAGCTCAAATCACTCTCCGCTTTATGAGCCCAGGCTGGCATTGCCGTCAGATAACGTTTTGCACGCTTATGTGCTTCCTCCGGGCCGAACTAAACATCGCGCCGAAACGCTACGTGACCTACGCGCGGGAATGCTTTGGCTGGGGCGTGTTCGCACTCATCGCCCGGTAACAACAGGTTCCCGGTATTTCTGGCTGGAAA                                                                                                                                                                    >  1:697565/1‑217
                                                                                                                                                                               GAGTATAGATAATCAGCTCAAATCACTCTCCGCTTTATGAGCCCAGGCTGGCATTGCCGTCAGATAACGTTTTGCACGCTTATGTGCTTCCTCCGGGCCGAACTAAACATCGCGCCGAAACGCTACGTGACCTACGCGCGGGAATGCTTTGGCTGGGGCGTGTTCGCACTCATCGCCCGGTAACAACAGGTTCCCGGTATTTCTGGCTGGAAATATC                                                                                                                                                                <  2:697565/217‑1
                                                                                                                                                                                                                                                                           CCGGGCGGAACTAAACATCGGGCCGAAACGCTACCTGAGCTACGCGCGGGAATGCTTTGGCTGTGGCGTGTTCGCACTCATCGCCCGGTAACAACAGGTTCCCGGTATTTCTGGCTGGAAATATCGAGGCTTTACCTTTGCTTTGATCTGATGTATCACCTGCACAATACATATTCAGTATGTTTATTAATCAAGATGTCACCATAAGGAGCATCATATGTCACAACATGAACAGTTCTGTCAGGCTTGCGGAATGCCGATGTCGGCACCAGATG          <  2:925289/275‑1
                                                                                                                                                                                                                                                                               GCCGGACTAAACATCGCGCCGAAACGCTACGTGACCTACGCGCGGGAATGCTTTGGCTGGGGCGTGTTCGCACTCATCGCCCGGTAACAACAGGTTCCCGGTATTTCTGGCTGGAAATATCGAGGCTTTACCTTTGCTTTGATCTGATGTATCACCTGCACAATACATATTCAGTATGTTTATTAATCAAGATGTCACCATAAGGAGCATCATATGTCACAACATGAACAGTTCTGTCAGGCTTGCGGAATGCCGATGTCGGCACCAGATGCACA      <  1:517038/275‑1
                                                                                                                                                                                                                                                                               GCCGAACTAAACATCGCGCCGAAACGCTACGTGACCTACGCGCGGGAATGCTTTGGCTGGGGCGTGTTCGCACTCATCGCCCGGTAACAACAGGTTCCCGGTATTTCTGGCCGGAAATATCGAGGCTTTACCTTTGCTTTGATCTGATGTATCACCTGCACAATACATATTCAGTATGTTTATTAATCAAGATGTCACCATAAGGAGCATCATATGTCACAACATGAACAGTTCTGTCAGGCTTGCGGAATGCCGATGTCGGCACCAGATGCACA      <  1:784316/275‑1
                                                                                                                                                                                                                                                                                   AACTAAACATCGCGCCGAAACGCTACGTGACCTACGCGCGGGAATGCTTTGGCTGGGGCGTGTTCGCACTCATCGCCCGGTAACAACAGGTTCCCGGTATTTCTGGCTGGAAATATCGAGGCTTTACCTTTGCTTTGATCTGATGTATCACCTGCACAATACATATTCAGTCTGTTTATTAATCAAGATGTCACCATAAGGAGCATCATATGTCACAACATGAACAGTTCTGTCAGGCCTGCGGAATGCCGATGTCGGCACCCGATGCACACAGT  >  2:236414/1‑275
                                                                                                                                                                                                                                                                                   AACTAAACATCGCGCCGAAACGCTACGTGACCTACGCGCGGGAATGCTTTGGCTGGGGCGTGTTCGCACTCATCGCCCGGTAACAACAGGTTCCCGGTATTTCTGGCTGGAAATATCGAGGCTTTACCTTTGCTTTGATCTGATGTATCACCTGCACAATACATATTCAGTATGTTTATTAATCAAGATGTCACCATAAGGAGCATCATATGTCACAACATGAACAGTTCTGTCAGGCTTGCGGAATGCCGATGT                      >  1:411957/1‑255
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
ACGCGGTAACTGTTATAGCACCACTTTGTTGCAGGACGCTCCCTCTTCATTACGTCCTGCACGTGGATACCCCAGCATCTCCATCAGCGGATCTTAGAATGTAATGGCGCGTGGCAGGTCGTTGGTTCCCAGCATAATGTAAGAAAACATCGGATCTCCTGAATAGATTCAGAGGGAGTATAGATAATCAGCTCAAATCACTCTCCGCTTTATGAGCCCAGGCTGGCATTGCCGTCAGATAACGTTTTGCACGCTTATGTGCTTCCTCCGGGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4531863‑4532138
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggccgaACTAAACATCGCGCCGAAACGCTACGTGACCTACGCGCGGGAATGCTTTGGCTGGGGCGTGTTCGCACTCATCGCCCGGTAACAACAGGTTCCCGGTATTTCTGGCTGGAAATATCGAGGCTTTACCTTTGCTTTGATCTGATGTATCACCTGCACAATACATATTCAGTATGTTTATTAATCAAGATGTCACCATAAGGAGCATCATATGTCACAACATGAACAGTTCTGTCAGGCTTGCGGAATGCCGATGTCGGCACCAGATGCACACAGT  <  NC_000913/4532518‑4532245

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.