Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 3,781,131 | 0 | T | C | 34.2% | 62.4 / 10.9 | 42 | intergenic (+114/‑84) | lldD/trmL | L‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent |
Reads supporting (aligned to +/- strand): ref base T (24/3); new base C (3/11); total (27/15) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 3.11e-05 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
AAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGC‑GGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACT‑CCCTCACTCTG‑AAACG‑ACACCGCACTCTTTTTTTCTCCCT‑CGC‑CCCTC‑CG‑GGGAGAGGGCCGGGGTGAGGG‑G‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCTGCATATCATCGAACCGATGGGATTTGCCTGGGACGATAAGCGCCTGCGCCGCGCGGGGCTGGACT > NC_000913/3780881‑3781365 | aaaaaGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGC‑GGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACT‑CCCTCACTCTG‑AAACG‑ACACCGCACTCTTTTTTTCTCCCT‑CGC‑CCCt > 2:495578/1‑251 (MQ=255) tGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGC‑GGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACT‑CCCTCACTCTG‑AAACG‑ACACCGCACTCTTTTTTTCTCCCT‑CGC‑CCCTC‑CG‑GGgaga > 1:248141/1‑251 (MQ=255) gAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGC‑GGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACT‑CCCTCACTCTG‑AAACG‑ACACCGCACTCTTTTTTTCTCCCT‑CGC‑CCCTC‑CG‑GGGagag > 2:227035/1‑251 (MQ=255) cAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGC‑GGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACT‑CCCTCACTCTG‑AAACG‑ACACCGCACTCTTTTTTTCTCCCT‑CGC‑CCCTC‑CG‑GGGAGAGGGCCGGGGTGAGGG‑G‑AAAAGGCCGCACTGCTCACCa > 1:800847/1‑251 (MQ=255) aaTTACGCAAGCTTCGCTGGTGCAGGGGCTGGGTCAAGAGTTGCATGC‑GGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTCTGTACT‑CCCCCACTCTG‑AAACG‑ACACCGCACTCTTTTTTTCTCCCT‑CGC‑CCCCC‑CG‑GGGCGAGGGCCGGGGAGAGGG‑G‑ACAAGCCCGCTCACCTCACCAATTTTc > 2:303955/1‑251 (MQ=255) nttcgtaaagtttggtgtgTGGAGGGGGTGGG‑AAAGGGTTCGCTGCGGGCCGTGGCCCCCGTGGCGAAGGGGACGGCGGCATGGCGGTTGGCCCCCCCTCCCCATCCCCCCCCCCCTCGGGGGGGGGGACCCTTTGGGCGCTG‑GTGTTCC‑CCCCCCCCCGGAAAACG‑CCCCCCCACTTTTTTTTCCTCCCC‑CCC‑CCCTC‑GG‑GGGGGGGGGCCGGGGGGGGGG‑G‑AAAAGGCCGCACTGCTCACCAATTTTCt < 1:495550/233‑1 (MQ=255) atcgggtGGTGAGGGGGCTGGGAAAAGGGGTCGCTGG‑GGACCTGCCCCCCAGGGAGAAAGGGAGGGCGGCAAGTTCGTTTGCCCCCCCCCCCCCTACCCCTCTCCCGAGGGGGGGGGGGCCTTTTGGGCGCTTTTTTCCCC‑CCCTCACTCTG‑AAACG‑CCCCCGC‑CTTTTTTTTTCCCCCC‑CCC‑CCCCCGGG‑GGGGGGGGGCGGGGGGGGGGG‑G‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGc < 1:452515/245‑1 (MQ=255) tAAAGAGTTGCCTGC‑GGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACT‑CCCTCACTCTG‑AAACG‑ACACCGCACTCTTTTTTTCTCCCT‑CGC‑CCCTC‑CG‑GGGAGAGGGCCGGGGTGAGGG‑G‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTAt > 2:654307/1‑251 (MQ=255) ggCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACT‑CCCTCACTCTG‑AAACG‑ACACCGCACTCTTTTTTTCTCCCT‑CGC‑CCCTC‑CG‑GGGAGAGGGCCGGGGTGAGGG‑G‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGa > 2:744090/1‑251 (MQ=255) cTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACT‑CCCTCACTCTG‑AAACG‑ACACCGCACTCTTTTTTTCTCCCT‑CGC‑CCCCC‑CG‑GGGAGAGGGCCGGGGTGCGGG‑G‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAAc > 1:2840/1‑251 (MQ=255) aaGGGAATGCGGCAAGTTCGTTGGCGCCCCCCCCCCCAACCCCTCCCCGACGGGGAGAGGGGACCGTGCGGCGTGTTTTGTCCC‑CCCGCACTCGG‑AAACC‑ACCCCGCCCTTTTTTTTCCCCCCT‑CCC‑CCCCC‑GG‑GGGAG‑GGGCCGGGGGGGGGG‑GAAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGc < 1:744043/251‑1 (MQ=255) gTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACT‑CCCTCACTCTG‑AAACG‑ACACCGCACTCTTTTTTTCTCCCT‑CGC‑CCCTC‑CG‑GGGAGAGGGCCGGGGTGAGGG‑G‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAACCATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAAcataat > 1:378512/1‑251 (MQ=255) cccTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACT‑CCCTCACTCTG‑AAACG‑ACACCGCACTCTTTTTTTCTCCCT‑CGC‑CCCTC‑CG‑GGGAGAGGGCCGGGGTGAGGG‑G‑AAAAGGCCGCACTGCCCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTAt > 2:33258/1‑176 (MQ=255) ggggACCGTTCGGCGCTGTATGTACT‑CCCTCACTCTG‑AAACG‑ACACCGCACTCTTTTTTTCTCCCT‑CGC‑CCCTC‑CG‑GGGAGAGGGCCGGGGTGAGGG‑G‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCTGCATatcat > 1:304031/1‑251 (MQ=255) ggggACCGTTCGGCGCTGTATGTACT‑CCCTCACTCTG‑AAACG‑ACACCGCACTCTTTTTTTCTCCCT‑CGC‑CCCTC‑CG‑GGGAGAGGGCCGGGGTGAGGG‑G‑AAAAGGCCGCACTGCCCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATCCCGCAAAATACTGGCAACATCATCCGTCTCTGCGCTAATACCGGCTTTCGTATGAATatcct > 2:172717/1‑249 (MQ=255) ggggACCGTTCGGCGCTGTATGTACT‑CCCTCACTCTG‑AAACG‑ACACCGCACTCTTGTTTTCTCCCT‑CGC‑CCCTC‑CG‑GGGAGAGGGCCTGGGTGATGG‑G‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTCTGCTACACACCGTAATTTACGAACCAGAAATTTCGCCACATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCGGCATatcag > 2:737263/1‑250 (MQ=255) ttgtcacaagagcagtgtatgttCTCCCCCCACCTTG‑ACACG‑AC‑CCCCACTCTTTTTCTCCCCCC‑CCC‑CCGCG‑GG‑GGGCGGGGGGCGGGGTGGGGG‑GAAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCTGCATatcat < 2:303480/236‑1 (MQ=255) ttgtgaaatgcgagagttatccccccctccctCCT‑AAACGCACCCCCCACT‑TTTTTTTCCCCCC‑CCC‑CCCCC‑CG‑GGGGAGGGGCCGGGGGGGGGGAA‑AAAAGGCCGAACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCTGCATatcatc < 2:74785/227‑1 (MQ=255) ttCGGCGCTGTATGTACT‑CCCTCACTCTG‑AAACG‑ACACCGCACTCTTTTTTTCTCCCT‑CGC‑CCCTC‑CG‑GGGAGAGGGCCGGGGTGAGGG‑G‑AAAAGGCCGCACGGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCTGCATATCATCGAACCGa > 2:551397/1‑251 (MQ=255) gtatgtaCT‑CCCTCACTCTG‑AAACG‑ACACCGCACTCTTTTTTTCTCCCT‑CGC‑CCCTC‑CG‑GGGAGAGGGCCGGGGTGAGGG‑G‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCTGCATatcat > 1:58271/1‑234 (MQ=255) taCT‑CCCTCACTCTG‑AAACG‑ACACCGCACTCTTTTTTTCTCCCT‑CGC‑CCCCC‑CG‑GGGAGAGGGCCGGGGTGAGGG‑G‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCTGCATATCATCGAACCGATGGGATTTGCCTgg > 1:372917/1‑251 (MQ=255) ccccccacctacagccccacCCCTCTTTTTTTTGCCCCCC‑CCC‑GCCCC‑GG‑GGGAGGGGCGCGGGGGGGAGG‑G‑CAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCTGCATATCATCGAACCGATGGGATTTGCCTGGGACg < 2:688080/234‑1 (MQ=255) ccctcg‑AAACG‑CCCCCCCCCTCTTTTTCCCCCCCC‑CCC‑CCCCC‑GG‑GGGGGGGGGCGGGGGGGGGGG‑G‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCTGCATATCATCGAACCGATGGGATTTGCCTGGGACGATAAg < 1:419390/246‑1 (MQ=255) aCTCTG‑AAACG‑ACACCGCACTCTTTTTTTCTCCCT‑CGC‑CCCTC‑CG‑GGGAGAGGGCCGGGGTGAGGG‑G‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCTGCATATCATCGAACCGATGGGATTTGCCTgggcagaaaag > 2:419410/1‑243 (MQ=255) ccccggaaccgcacccGCCCTTTTTTTGTCGCCCC‑CCC‑CCCCC‑CG‑GGGAGGGTGCCGGGGGGGGGG‑A‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCTGCATATCATCGAACCGATGGGATTTGCCTGGGACGATAAg < 1:202657/237‑1 (MQ=255) acttggacgagcccccGCTCTTTTTTTTTCCCCCC‑CGC‑CCCCC‑GG‑GGGAGAGGGGGGGGGGGGGGG‑G‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCTGCATATCATCGAACCGATGGGATTTGCCTGGGACGATAAg < 2:372937/237‑1 (MQ=255) accctacacgcaccccgcatcttttttctCCCCCC‑CGC‑CCCCC‑GG‑GGGGGGGGGCGGGGGTGGGGG‑G‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCTGCATATCATCGAACCGATGGGATTTGCCTGGGACGATAAg < 1:654267/229‑1 (MQ=255) cctcgcaacagcccccccacttgtttttCCCCCTGTGC‑CCCCC‑GG‑GGGAGGGCGCGGGGGGGGGGG‑G‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCTGCATATCATCGAACCGATGGGATTTGCCTGGGACGATAAg < 1:551363/228‑1 (MQ=255) ccccaaaaacaccaccgtctttttttttCCCCCT‑GCC‑CCCAT‑CG‑GGGAGGAGGCCGGGTTGGGGG‑GAAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCTGCATATCATCGAACCGATGGGATTTGCCTGGGACGATAAg < 2:608968/230‑1 (MQ=255) ccactgaagagccaccgctctTTTTTTTACCCC‑CGCGCCCTC‑CGTGGGGGAGGGCGGGGTAGAGGT‑G‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCTGCATATCATCGAACCGATGGGATTTGCCTGGGACGATAAg < 1:172707/234‑1 (MQ=255) g‑ACACCGCACTCTTTTTTTCTCCCT‑CGC‑CCCTC‑CG‑GTGAGAGGGCCGGGGTGAGGG‑G‑AAAAGGCCGCACTGCCCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCCCTAATACCGGCTTTCGTCTGCATATCATCGCACCCATGGGCTTTGCCTGGGACGATAAGCCCCTGcccc > 1:620821/1‑251 (MQ=255) g‑ACACCGCACTCTTTTTTTCTCCCT‑CGC‑CCCTC‑CG‑GGGAGAGGGCCGGGGTGAGGG‑G‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGCACCAGAAATTCCGCCAAATACTGGCAACATCATcc > 2:780157/1‑173 (MQ=255) g‑ACACCGCACTCTTTTTTTCTCCCT‑CGC‑CCCTC‑CG‑GGGAGAGGGCCGGGGTGAGGG‑G‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCTGCATATCATCGAACCGATGGGATTTGCCTGGGa > 1:303463/1‑234 (MQ=255) g‑ACACCGCACTCTTTTTTTCTCCCT‑CGC‑CCCTC‑CG‑GGGAGAGGGCCGGGGTGAGGG‑G‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCTGCATATCATCGAACCGATGGGATTTGCCTGGGAc > 1:74780/1‑235 (MQ=255) g‑ACACCGCACTCTTTTTTTCTCCCT‑CGC‑CCCTC‑CG‑GGGAGAGGGCCGGGGTGAGGG‑G‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCTGCATATCATCGAACCGATGGGATTTGCCTGGGACGATAAGCGCCTGcgcc > 1:562064/1‑251 (MQ=255) g‑ACACCGCACTCTTTTTTTCTCCCT‑CGC‑CCCTC‑CG‑GGGAGAGGGCCGGGGTGAGGG‑G‑‑AAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCTGCATATCATCGAACCGATGGGATTTGCCTGGGACGATAAGCGCCTGcgccg > 1:688038/1‑251 (MQ=255) gacctctTTTTTCCCCCCC‑CCC‑CCCCC‑GG‑GGGGGGGGGCGGGGTTGGGGG‑G‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCTGCATATCATCGAACCGATGGGATTTGCCTGGGACGATAAGCGCCTGCGCCGCGCgg < 1:562263/248‑1 (MQ=255) ctctTTTTTTCTCCCT‑CGC‑CCCTC‑CG‑GGGAGAGGGCCGGGGTGAGGG‑G‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCTGCATatcat > 1:327542/1‑201 (MQ=255) ctctTTTTTTCTCCCT‑CGC‑CCCTC‑CG‑GGGAGAGGGCCGGGGTGAGGG‑G‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCTGCATATCATCGAACCGATGGGATTTGCCTGGGACGATAAGCGCCTGCGCCGCGCGGGGc > 2:202669/1‑251 (MQ=255) ttttCTCCCT‑CGC‑CCCTC‑CG‑GGGAGAGGGCCGGGGTGAGGG‑G‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCTGCATATCATCGAACCGGTGGGTGTTGCCTGGGACGATAATCGCCTGCGCCGCGCGGGCTTGGACt > 1:117247/1‑251 (MQ=255) ttttCTCCCT‑CGC‑CCCTC‑CG‑GGGAGAGGGCCGGGGTGAGGG‑G‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCTGCATATCATCGAACCGATGGGAtt > 1:307148/1‑210 (MQ=255) ttttCTCCCT‑CGC‑CCCTC‑CG‑GGGAGAGGGCCGGGGTGAGGG‑G‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCTGCATATCATCGAACAGATGGGATTTGCCTGGGACGATAAGCGCCTGCGCCGCGCGGGGCTGGACt > 2:562298/1‑251 (MQ=255) ccTC‑CG‑GGGAGAGGGCCGGGGTGAGGG‑G‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCTGCATATCATCGAACCGATGGGATTTGCCTGGGACGATAAGCGCCTGcgcc < 2:5382/222‑1 (MQ=255) | AAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGC‑GGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACT‑CCCTCACTCTG‑AAACG‑ACACCGCACTCTTTTTTTCTCCCT‑CGC‑CCCTC‑CG‑GGGAGAGGGCCGGGGTGAGGG‑G‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCTGCATATCATCGAACCGATGGGATTTGCCTGGGACGATAAGCGCCTGCGCCGCGCGGGGCTGGACT > NC_000913/3780881‑3781365 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |