New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 315401 =NA (NA)5 (0.040) 5/440 11.0 NA noncoding (173/1255 nt) IS3 repeat region
?NC_000913 315627 = NA (NA)noncoding (399/1255 nt) IS3 repeat region
Rejected: Coverage evenness skew score above cutoff.

AGTCGGGCTGTTTGGTAAAGATAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACTCTACAACTGGCGCAGTAAACAGCAAAATCAGCAGACGTCTTCTGAACG  >  NC_000913/315151‑315475
                                                                                                                                                                                                                                                          |                                                                          
aGTCGGGCTGTTTGGTAAAGATAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACAAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGACACCCTGAAGCTTGCTGAACGAATCGGCGTTACTGCCGCAGCCCGt                                                                            >  2:1265010/1‑251 (MQ=255)
 gtctgcctcgttGGTAAACATACGCGCCTGAAAGACCCGCATGCTATTTCTGCCGACGTGACCTATCCGCCAGGGCCTCTTCCCCCGCAATAGTGAACCCGCCGCTAAGTGAGTAAACTCTCAATCACAGGTGACTCACATGACAAAGACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTg                                                                           <  2:393923/241‑1 (MQ=17)
 gTCGGGCTGTTTGGTAAAGATAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTTTACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAGCCCCGTAAACAGCATACTCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTg                                                                           <  2:1017948/251‑1 (MQ=255)
    gggCTGTTTGGTAAAGATAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAAc                                                                        >  1:1241215/1‑251 (MQ=255)
        tGTTTGGTAAAGGTAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGCCCTATACGCCAGTGCCTCTTCCCCAGCAATAGTGTACACGAGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACGTAACAAAAACAATATCAACCCGTAAAATACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAg                                                                    <  1:117433/251‑1 (MQ=18)
         ttttGGTAAAGATAAGCGCAAGCAAGACCCGCATGCTATTTCTGCCGAGGGGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACACGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGc                                                                   <  2:657563/250‑1 (MQ=255)
         gTTTGGTAAAGATAAGCGCCAGAAAGACCCGCGTGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAGACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGc                                                                   >  1:543087/1‑251 (MQ=255)
         gTTTGGTAAAGATAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTCAACTATCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAAACCCGTAAACAGCATTCTCCTGAATTTCGCAGAAAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGc                                                                   >  2:166071/1‑251 (MQ=255)
         gTTTGGTAAAGATAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAGCTCCCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAAACCAGTAAACAGCATTCGCCTGAATTTCGCAGTTAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGc                                                                   >  2:929593/1‑251 (MQ=255)
         gTTTGGTAAAGATAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTTCGTCACAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTCAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGTACTAAGc                                                                   >  1:1085152/1‑251 (MQ=255)
         gTTTGGTAAAGATAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCatc                                                                   >  2:1020323/1‑249 (MQ=255)
         gTTTGGTAAAGATAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGc                                                                   <  1:1200562/251‑1 (MQ=255)
         gTTTGGTAAAGATAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGc                                                                   >  2:1200806/1‑251 (MQ=255)
         gTTTGGTAAAGATAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACGCAGc                                                                   >  2:175815/1‑251 (MQ=255)
         gTTTGGTAAAGATAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCGGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTCACTGCCGCAGCCAGTGAAATCAGc                                                                   >  1:1160071/1‑251 (MQ=255)
         gTTTGGTAAAGATAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCATGAATTTAGCAATGAAGCCCTAAAGCTTGCTGACCGCATCGGTGTTATTGCCGCCGCCCGTGAACTCAGc                                                                   >  2:889205/1‑251 (MQ=255)
         gTTTGGTAAAGATAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACCCCCAGCCAGAGGTTACACACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCCGAACGCATCGGTGCTACTGCCGCAGCTCGCGAACTCAGc                                                                   >  2:312855/1‑251 (MQ=18)
         gTTTGGTAAAGATAAGCGCCAGAAAGACCCGCATGCTATTTATGCCGAGGTGAACTATACGCCAGTGACTCTTAACCAGCAATAGTGGACACGCGGCTAAGTGAGGAAACTACCAGTCAGAGGTGAATCACACGACAAAAACAGTATCAACAAGTAAAAAACCCCGTAAACAGCATTTTGCTGAATTTCGCAGGGAAGCACTGAAGCGTGCGGAACGCCTCGGGGGTACGGGAGGAGCCCGTGAAagcagc                                                                   >  2:548992/1‑251 (MQ=18)
                    aTAAGCGCCAGAAACACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCTGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCAAATGACAAAATCAGTAGCAGCCAGTAAAAAACCCCGTATGCAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATc                                                        <  2:98790/251‑1 (MQ=255)
                               taaggcgcGCAAGCTATATCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCACCCAGTAAAAAACCCCGTAAACAACATTCGCCTGAATTTCGCAGTGGAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACTCTACa                                             <  1:749767/244‑1 (MQ=255)
                                     ccGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGCGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAACTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTTTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACCACTCTACAACTGgc                                       >  1:375673/1‑251 (MQ=255)
                                      cGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCCGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACTCTACAAATGgcg                                      >  1:1386192/1‑251 (MQ=255)
                                         aTGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACTCTACAACTGGCGCAg                                   <  1:1020099/251‑1 (MQ=255)
                                            cTATTTCTTCCGCGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACTCTACAACTGGCGCAGTaa                                <  2:873424/251‑1 (MQ=255)
                                                ttCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCCGAACTATACAACTGGCGCAGTAAACAg                            >  1:343766/1‑251 (MQ=255)
                                                       gAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACTCTACAACTGGCGCAg                                   <  2:538186/237‑1 (MQ=40)
                                                       gAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGAATGAATCACAAc                                                   >  1:819236/1‑221 (MQ=255)
                                                            gccctatcctcccatGCCTCTTGCCAGGCAATGGAGGACACGCGGCTAAGTGTGTAAGCTCTCATTCACAGGGGACTCAAAAGACAAAAACAGTATCAACCAGTAAAAAGCCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCAGCGATGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACTCTACAACTGGCGCAATAAACAGCAAAATcagcag                <  2:672874/237‑1 (MQ=11)
                                                            gACCTATACGCCAGTGCCTCTTCCCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACTCTACAACTGGCGCAGTAAACAGCAAAATcagcag                <  2:543210/251‑1 (MQ=37)
                                                            gACCTATACGCCAATGCCTCTTACCCAGCAATAGTTGACACGCGGCTAAGGGAGTAAACTCTCAGACAGAGGTGACTCACATGACAAAAACAGTATCAACCATTAAAAAACCCCGTAAACAGCATTCGCCCGAATTTCTCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACTCTACAACTGGCGCAGTAAACAGCAAAATcagcag                <  2:1386482/251‑1 (MQ=255)
                                                                 atagcccAGGGCCTCTTACCCAGGAATAGTGGACCCGCGGCTAAGTGAGTAAACTCGCAGTCAGAGGGGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACTCTACAACTGGCGCAGTAAACAGCAAAATCAGCAGACGtc           <  2:1363592/246‑1 (MQ=9)
                                                                 ataCGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGc                                                                   <  1:843518/195‑1 (MQ=37)
                                                                 ataCGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACTCTACAACTGGCGCAGTAAACAGCAAAATCAGCAGACGtc           <  1:1388128/251‑1 (MQ=35)
                                                                  taCGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCACTGAAGCTTGCTGAACGAATCGGTGTTACTGCCGCAGCCCGCGAACTCAGCCTGTCTGAATCACAAATACAAAACTGGCGCAGGAAAAAGAAAAATAAGCAGaaggct          >  2:896878/1‑246 (MQ=11)
                                                                      ccATTGCGTCTTACCCAGGAAGAGGGGACACGCGGCAAGGTGAGTAAACTCTCAATCAGAGGTGAATCACATGACAAAAACAGTACCAACCGGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTTAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAACCCGTGAACTCAGCCTGTATGAATCACAACTCTACAACTGGCGCAGTAAACAGCAAAATCAGCAGACGTCTTCTg      <  2:551901/251‑1 (MQ=11)
                                                                      ccAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACTCTACAACTGGCGCAGTAAACAGCAAAATCAGCAGACGTCTTCTg      <  1:584683/251‑1 (MQ=33)
                                                                      ccAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACTCTACAACTGGCGCAGTAAACAGCAAAATCAGCAGACGTCTTCTg      >  1:1363308/1‑251 (MQ=33)
                                                                      ccAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACACCGTAAACAGCTTTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCACAGGTGTTACTGCCGCAGCGCGTGAACTCATCATGTATGAATCAGAACCATACAACGGGCGCAGTAAAAAGCACAATTAGAAGGCgcatgcgg      >  1:1337657/1‑244 (MQ=11)
                                                                         atGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAGCCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACTCTACAACTGGCGCAGTAAACAGCAAAATCAGCAGACGTCTTCTGAAc   <  1:1225227/250‑1 (MQ=14)
                                                                          tGCCTCTTACCCAACAATAGTGGACACGCAGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGTCAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACTCTACAACTGGCGCAGTAAACAGCAAAATCAGCAGACGTCTTCTGAACg  <  1:166010/251‑1 (MQ=14)
                                                                                                                                                                                                                                                          |                                                                          
AGTCGGGCTGTTTGGTAAAGATAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCCTCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACTCTACAACTGGCGCAGTAAACAGCAAAATCAGCAGACGTCTTCTGAACG  >  NC_000913/315151‑315475

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.