New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 294746772 (0.430)3 (0.030) 3/264 11.3 5.8% intergenic (+4/‑30) metZ/metW tRNA‑Met/tRNA‑Met
?NC_000913 2947688 = 54 (0.530)intergenic (+5/+69) metV/amiC tRNA‑Met/N‑acetylmuramoyl‑L‑alanine amidase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

GATAACAAACCGCCGCGTTTAATGAAATGAGCAGCCTCTCCCTGACGCAAATTTTGCACAAAAAATAGGCTTTAGTGATTTGTTTTTGTTCAAAATCATGCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTG  >  NC_000913/2947217‑2947714
                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                       
gATAACAAACCGCCGCGTTTAATGAAATGAGCAGCCTCTCCCTGACGCAAATTTTGCACAAAAAATAGGCTTTAGTGATTTGTTTTTGTTCAAAATCATGCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTa                                                                                                                                                                                                                                                         <  2:1339236/251‑1 (MQ=255)
  tAACAACTCGCCTCGTTAAATGAAATGAGCAGCCTGTCCCTGACGCAAAGTTTGCACAAAAAATAGGCTTTAGTGATTTGTTTTTGTTCAAAATCATGCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTaaa                                                                                                                                                                                                                                                       <  1:288579/251‑1 (MQ=255)
   aaCAAACCGCCGCGGTTAATGAAATGAGCAGCCTCTCCCTGACGCAAATTTTACACAAAAAATAGGCTTTAGTGATTTGTTTTTGATCAAAATCATGCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTaaaa                                                                                                                                                                                                                                                      <  1:923699/251‑1 (MQ=255)
       aaCCGCCGCGTTTAATGAAATGAGCAGCCTCTCCCTGACGCAAATTTTGCACAAAAAATAGGCTTTAGTGATTTGTTTTTGTTCAAAATCATGCCAAATCCGTGATCGGGGTAACAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGGGCAGCCTGGTAGCTCGTCGGGCCCCTAACCCGACGGTATACGCGCAAACTCCGCTCCGCCGCAACCAACTAAAAttt                                                                                                                                                                                                                                                   >  1:1223536/1‑251 (MQ=255)
       aaCCGCCGCGTTTAATGAAATGAGCAGCCTCTCCCTGACGCAAATTTTGCACAAAAAATAGGCTTTAGTGATTTGTTTTTGTTCAAAATCATGCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTtg                                                                                                                                                                                                                                                  <  2:1308315/251‑1 (MQ=255)
                    aatgaaatgaGCAGCCTCTCCCTGACGCAAATTTTGCACAAAAAATAGGGTTTAGTGATTTGTTTTTGTTCAAAATCATGCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAAtt                                                                                                                                                                                                                                                    <  1:305267/236‑1 (MQ=255)
                     atgaaatgaGCAGCCTCTCCCTGACGCAAATTTTGCACAAAAAATAGGCTTTAGTGATTTGTTTTTGTTCAAAATCATGCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGc                                                                                                                                                                                                                                      >  2:1303707/1‑249 (MQ=255)
                     atgaaatgaGCAGCCTCTCCCTGACGCAAATTTTGCACAAAAAATAGGCTTTAGTGATTTGTTTTTGTTCAAAATCATGCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCGCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATACGGCCCCAGAAACCAATTAAAATTGGATGAAGTAAAGCAg                                                                                                                                                                                                                                    >  2:1699484/1‑251 (MQ=255)
                          atgaGCAGCCTCTCCCTGACGCAAATTTTGCACAAAAAATAGGCTTTAGTGATTTGTTTTTGTTCAAAATCATGCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTGGATGAAGTAAAGCAGTACgg                                                                                                                                                                                                                               >  2:370172/1‑251 (MQ=255)
                          atgaGCAGCCTCTCCCTGACGCAAATTTTGCACAAAAAATAGGCTTTAGTGATTTGTTTTTGTTCAAAATCATGCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACgg                                                                                                                                                                                                                               >  2:214762/1‑251 (MQ=255)
                            gaGCAGCCTCTCCCTGACGCAAATTTTGCACAAAAAATAGGCTTTAGTGATTTGTTTTTGTTCAAAATCATGCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTg                                                                                                                                                                                                                             <  2:372692/251‑1 (MQ=255)
                            gaGCAGCCTCTCCCTGACGCAAAGTTTGCACAAAAAATAGGCTTTAGTGATTTGTTTTTGGTCAAAAACATGCAAAATCCGTGAGCGGGGGAAAAAAAAGGTTGCATGAAGACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTg                                                                                                                                                                                                                             <  1:214745/251‑1 (MQ=255)
                            gaGCAGCCTCTCCCTGACGCAAAATTTGCACAAAAAATAGGCTTTAGTGATTTGTTTTTGTTAAAAATCATGCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGAATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTg                                                                                                                                                                                                                             <  1:668483/251‑1 (MQ=255)
                                       cccTGACGCAAATTTTGCACAAAAAATAGGCTTTAGTGATTTGTTTTTGTTCAAAATCATGCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCGCCGCAACCAATTAAAATTTGATGAAGTAACGCAGTAAGGTGACGCGGGGTgg                                                                                                                                                                                                                  >  2:1192907/1‑251 (MQ=255)
                                            aCGCAAATTTTGCACAAAAAATAGGCTTTAGTGATTTGTTTTTGTTCAAAATCATGCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGa                                                                                                                                                                                                                            >  2:305296/1‑236 (MQ=255)
                                               cAAATTTTGCACAAAAAATAGGCTTTAGTGATTTGTTTTTGTTCAAAATCATGCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTACAAATCCGGCCCCCGCAACCAATTAAACTGTGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCt                                                                                                                                                                                                          >  1:372663/1‑251 (MQ=255)
                                               cAAATTTTGCACAAAAAATAGGCTTTAGTGATTTGTTTTTGTTCAAAATCATGCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGAATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGcc                                                                                                                                                                                                           <  2:1223649/251‑1 (MQ=255)
                                                         acaAAAAATAGGCTTTAGTGATTTGTTTTTGTTCAAAATCATGCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAACtcgt                                                                                                                                                                                                >  2:1310037/1‑251 (MQ=255)
                                                         acaAAAAATAGGCTTTAGTGATTTGTTTTTGTTCAAAATCATGCAAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGTTGAATGCAGAAAAGCGGTACGGTGACGCGGGTCGGAGCAGCCGGGTACCccgt                                                                                                                                                                                                >  2:107084/1‑251 (MQ=25)
                                                          caAAAAATAGGCTTTAGTGATTTGTTTTTGTTCAAAATCATGCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGACGCGGGGt                                                                                                                                                                                                                    <  2:824208/230‑1 (MQ=255)
                                                             aaaaTAGGCTTTAGTGATTTGTTTTTGTTCAAAATCATGCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTa                                                                                                                                                                                                                                                         <  1:1346725/190‑1 (MQ=255)
                                                                    tcgttAGTGATTTGTGTTGGTGCAAAATCATGCCAAACCCGTGAACGGGGTAACAAAAAGTTGTCATACAAAGGCGAGTGGAGTATAGTGCGCATCCACGCACGCTGGGTGGAGCAGCCTGTTAGTGCGTCGGACTCATAACCCGAAGGTCGGCGGTTCAAATCCGGCCCCCGCAACCAATTAACATTTGATGAAGTAAAGCAGTACTGGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATaa                                                                                                                                                                                     <  2:1825449/248‑1 (MQ=18)
                                                                    gCTTTAGTGATTTGTTTTTGTTCAAAATCATGCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGt                                                                                                                                                                                                                                   <  2:1053584/205‑1 (MQ=255)
                                                                    gCTTTAGTAATTTGTGTTTGTTCAAAATCATGCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGAATGAAAACGCGAGGGGAGTCTAGTGCGCATCGACGGACGCGGGGTGAAGCAGACTGGTAGCTCGTTGGCCTCATAACCCGAAGGTCGTCGGTTCAAATACGTCCCCCGCAACCAATTAAAATTGGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGcc                                                                                                                                                                                                           <  2:1147405/229‑1 (MQ=25)
                                                                        tgttcaTTTGTTTTAGTTAAAAAATAAGCCAAAACCGTGATCAGAAGAAGAAGAAGGTTACATGAAAACGCGGGTGGAGCAGACGGCAATTCTACGCAAGCGAGATGGTTCAGCCAGTTAGCTCTTAGGAATATCAACCCGAAGGTGGGAGGTGCAAAACCGACCCGCGGAACCAAATCAAAAGTGATGAAGAAAGGCAGTACAGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCg                                                                                                                                                                                 <  1:699432/246‑1 (MQ=2)
                                                                                tgtttttgttCAAAATCATGCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATTACCCGAAGgtcgt                                                                                                                                                                         <  2:1672550/251‑1 (MQ=255)
                                                                                  tttttgttCAAAATCATGCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGGTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGGGCAGCCTGGTAGCTCGTCggg                                                                                                                                                                                            >  1:824137/1‑230 (MQ=255)
                                                                                     ttgttCAAAATCATGCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTAc                                                                                                                                                                                                                                 >  2:1346852/1‑190 (MQ=255)
                                                                                      tgttCAAAATCATGCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGCCGGGCTCATAACCCGAAGGTCGTCGGTTc                                                                                                                                                                   >  2:1843276/1‑251 (MQ=255)
                                                                                       gttCAAAATCATGCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGAc                                                                                                                                                                                                                           <  2:903147/194‑1 (MQ=255)
                                                                                       gttCAAAATCATGCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCGGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCa                                                                                                                                                                  >  2:96728/1‑251 (MQ=255)
                                                                                          cAAAAGCAAGCCAAATCCGTGATCGGGGTAAACAAAAGGTTGCATGAAAACGCGAGCGTAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTTGTCGGGCTCATAACCCGAAGGTCGGCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAAt                                                                                                                                                               <  2:927767/251‑1 (MQ=255)
                                                                                           aaaaTCATGCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGc                                                                                                                                                                                                                                      >  1:47438/1‑179 (MQ=255)
                                                                                            aaaTCATGCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCAGGCCCCCGCACCCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGACGCGGGGGGGAGCAGcc                                                                                                                                                                                                           >  1:1053500/1‑205 (MQ=255)
                                                                                            aaaTCATGCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAACGCTGTTGGCTCAAATCCGCCCCCTGCAACCAATCAAACTTTGATGAAGGTAAGAAGTTCGCGGACGCGGGGTGGCGCAGCCTGGTAGCACGTCGGGGTCATTAccctatcacacatacacctctgaa                                                                                                                                                             >  1:1147308/1‑230 (MQ=21)
                                                                                             aaTCATGCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCACATCCGGCCCCCGCAACCAATTAAAAAACGACGAAATAAAGCCGTACAGTGACGCGGGGTGGAGCAGACTAGTAGCTCGTCGGGCTCCTAACCCGACGCTCGTCGGATCACATCCg                                                                                                                                                            >  2:1317644/1‑251 (MQ=21)
                                                                                                  tGCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAAtt                                                                                                                                                                                                                                                    <  1:1469567/158‑1 (MQ=255)
                                                                                                         tCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAAtt                                                                                                                                                                                                                                                    <  2:978591/151‑1 (MQ=255)
                                                                                                              gATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAAtt                                                                                                                                                                                                                                                    <  1:30284/146‑1 (MQ=255)
                                                                                                               aTCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCCATTAAAATTTGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCt                                                                                                                                                                                                   >  1:903069/1‑194 (MQ=255)
                                                                                                                          aaaaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGa                                                                                                                                                                                                                            >  2:1469715/1‑158 (MQ=255)
                                                                                                                           aaaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGATGCGGGGTGGAGCAGCCTAGTAGCTCGTCGGGCTCTTAAACCGACGGTTGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAtttacatcaagc                                                                                                                              >  2:1399160/1‑242 (MQ=18)
                                                                                                                              aGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTGGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCACCGCAACCAATCAAATTTGATGAAGTaaa                                                                                                                           >  2:1680035/1‑251 (MQ=255)
                                                                                                                                 ttGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGa                                                                                                                                                                                                                            >  1:978511/1‑151 (MQ=255)
                                                                                                                                 ttGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGACTGGTAGCTCGTCGGGCTCATAACCCGACGGCCGCCGGTTCAAATCCGGCCCCCGCAACCAATCAATATtgatcatacaaaagc                                                                                                                        >  2:1153811/1‑240 (MQ=17)
                                                                                                                                     aTGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGa                                                                                                                                                                                                                 <  2:1159846/158‑1 (MQ=255)
                                                                                                                                      tGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGa                                                                                                                                                                                                                            >  2:30284/1‑146 (MQ=255)
                                                                                                                                                    gAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTg                                                                                                                                                                                                                             <  2:1464494/131‑1 (MQ=255)
                                                                                                                                                      gTAGAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAAttt                                                                                                                                      <  2:1060814/216‑1 (MQ=255)
                                                                                                                                                             gcgcATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTc                                                                                                                                                                                         >  1:1159749/1‑158 (MQ=255)
                                                                                                                                                                         aCGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCCACCAATTAAAACTCGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGACGgt                                                                                                                                                                            >  2:624125/1‑159 (MQ=255)
                                                                                                                                                                            cgGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATAATTTACTGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCCCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCATATTTGATGACGTCACAGCAGTACGGAGACGCGTGTCGGAGCCGCCGGGTAGCtcgagcggc                                                                             >  2:608737/1‑245 (MQ=14)
                                                                                                                                                                            cgGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAg                                                                                                                                                                                                     >  1:1464351/1‑131 (MQ=40)
                                                                                                                                                                              gggTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACACGAAGGTCGCCGGTTCAAATCCGGCCCCCGCAACCAATCAAATTTGATGAAGTAAACGCAGTCCGGt                                                                                                                >  2:15455/1‑214 (MQ=255)
                                                                                                                                                                              gggTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTGGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCGAATCTGGCACCCGCAACCAATCAAACGAGACGAAGTAAAAGCAGGACGGTGATGCGGGGTTGAGAAGAATAGTAGCTCGTCGGGccc                                                                           >  2:1391139/1‑249 (MQ=17)
                                                                                                                                                                              gggTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATATGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCAGGTAGCTCGTCGGGACCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCACGCAACCCATCATTTTAGACCCAGAAAAATCAGTACTAGGAACCGGTCTGGAGCAGACTggcgactcgtaggtact                                                                           >  2:1090758/1‑236 (MQ=11)
                                                                                                                                                                                              tAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAATTTGATGAAATAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGgtcgt                                                           >  2:1397917/1‑251 (MQ=255)
                                                                                                                                                                                                  tcgtcgGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGACGCTGGGTGGAGCAGCGTGGTAGCTCGTCGGGATCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAATTTGATGAAGTa                                                                                                                             >  2:503747/1‑181 (MQ=255)
                                                                                                                                                                                                      cgGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGACGAATTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAGTCTAATATACACAACTCAAAGCAGAAGGGTGACGCGGGGTAGATGAGTCCGGTCGCCCGTCGGCATCAAAAACCGCAGATAGTCGGTTCaa                                                   >  2:49062/1‑251 (MQ=14)
                                                                                                                                                                                                        ggCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGgt                                                                                                                                                                            >  2:1746481/1‑128 (MQ=255)
                                                                                                                                                                                                          cTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAATTTGATGAAGTAAAAg                                                                                                                         <  2:1016063/177‑1 (MQ=255)
                                                                                                                                                                                                                aCCCGAAGGTCGTCGGTTCAAATTCGGCCCCCGCAACCAATTAAAATTTGTTGTAGTAAATCAGTACGGTGACGCGGGGTGGAGCAGACTGTTAGCTTGTCGGGCTCATAACTCGAAGGGCGTCGGGTCAAATCCGGCCCCCCCAACCAACCAAATTtgatg                                                                                                                                  >  2:1218669/1‑162 (MQ=255)
                                                                                                                                                                                                                  ccGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGc                                                                                                                                                                                                                                      >  1:297835/1‑60 (MQ=255)
                                                                                                                                                                                                                    gAAGGTCAGCGGTTCCAATCCGGCGCCCGCAACCATATAAAATATGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAAGCAATCAAATTTGATGAAGTAAAAGCCGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCa                                     <  2:1078335/251‑1 (MQ=18)
                                                                                                                                                                                                                     aaGGTCGTCGGGTCAAATACGACCCCCGAAACCAATTAAAATTGAATGAAGTAAAGCAGAGAGGTGAAGCGGGGTGGAGCAGCCTTGTAGCAGGTCGGTATAAGAACAAGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAAttt                                                                                                                                      <  1:797427/153‑1 (MQ=14)
                                                                                                                                                                                                                           gtcgGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCCACCAATCAAATTTGATCAAGAAAGATCAGTACTGGCACCCGGGGTGCGGCAACCAGGTGCCTCGTAGGGCCCATTTCCCGAAGCCCGCCGGTTCAAATCCGGCCCTCGCAACCAatc                              >  2:472818/1‑250 (MQ=17)
                                                                                                                                                                                                                                        cGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCCCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAGTTTGATCAAGTAAAAGCAGTACGGTTACGCGGGGTGGAGCAGCCTGGTAGCTTGCCGGGCCCCTAACCCGACGGGCGTCGGTTCAAATCCGGCCCCCGCAACCAATTCTTGAACACCCTa                 >  2:942635/1‑251 (MQ=25)
                                                                                                                                                                                                                                        cGGCCCCCGCAACCAATTAAAATTTGACGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCATGGTAGCTCGACGGACTCATAACCCGAAGGGCGTCGGTTCAAATCCGGCCCCCGCGACCAATCAATGTTCATCAAATCAAAGCATTACGGGGACGCGGGGTAGAGCAACCTGCTAGCACGCCGGGCTTATAACACGCAAGTCGACGGCTCAGATACGGACCCCGCGACCTATGCTTGAAAAACCTa                 >  2:149208/1‑251 (MQ=12)
                                                                                                                                                                                                                                         ggCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAATTTTGACCCAGTAAGAGCAGTACGGGTACGTGGGGTGCAGAAGGCTGGTGGCTTCCCGGGCCTATAACCCAAAGGCCGTCCGTTCAAATCCGGCCCCCGCCACCATTCCTTTTACACCCTaa                >  2:75761/1‑251 (MQ=17)
                                                                                                                                                                                                                                               cccGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAATTTGATGAAGTAAAAGCAGTACGGTGa                                                                                                              >  2:797497/1‑153 (MQ=255)
                                                                                                                                                                                                                                                    aaCCAATTAAAATTTGGTGAAGTAAAGGCGTCCGGTTGTGTGGTGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGGCACCAATCAAATTTGATGGAGTAATAGCAGTACGGTGACGCAGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGttt       <  2:1495917/251‑1 (MQ=17)
                                                                                                                                                                                                                                                       cAATTAAAATTTGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCGGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAATTTGATGAAGTAAAAg                                                                                                                         <  1:1256137/134‑1 (MQ=255)
                                                                                                                                                                                                                                                         aTTAAAATTTGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAATTTGACGAAGTAAAAGCAGTACGGTGCAGCGGGGTGGAGCAGCCTGGTAGATCGTCGGGCCCATAACCCGAAGGTCGTCGGGTCAAATCCAGCCCCAGCAACCAATTACTGatgttacttacacacatctccgag  >  2:1737853/1‑228 (MQ=17)
                                                                                                                                                                                                                                                         aTTAAAATTTGATGAAGGAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCATTGAAGACGAAAAAAGAGCAGGACGGGGATGTGGGGTGGAGCAGCAAGGTAGCCGGTAGGACTTCTAAGCCGAAGGGAGCCGGCTCAAAACCGGCGCCCGCAACCAATGCTTGAACACTCCAGCCGGGGtttatttc  >  2:1363364/1‑250 (MQ=9)
                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                       
GATAACAAACCGCCGCGTTTAATGAAATGAGCAGCCTCTCCCTGACGCAAATTTTGCACAAAAAATAGGCTTTAGTGATTTGTTTTTGTTCAAAATCATGCCAAATCCGTGATCGGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGTAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTATTGAACACCCTAACGGGTGTTTTTTTG  >  NC_000913/2947217‑2947714

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.