| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 443959 | 25 (0.710) | 4 (0.120) | 4/236 | 4.0 | 14.8% | coding (557/912 nt) | panE | 2‑dehydropantoate reductase, NADPH‑specific |
| ? | NC_000913 | = 443977 | 23 (0.700) | coding (539/912 nt) | panE | 2‑dehydropantoate reductase, NADPH‑specific | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TCACGCAAATCTTCTGCTGAAGTATGATGCCCTTCGCGTTCGATCACCGCCGCGACTTCTTCGCATATCTGCATAATTTCTTGCGGATGATGACGTAATTCACCGTTCGGGCAATTCCAGATGGCAGTCAGTGGATTAATCACGCAGTTGACTGCCAGCTTGCGCCACAGCTCGGCGCGAATATTGTTATGCCAGGCAACGTCAGGCAACACGGTTTGCAAAATATCCGCCAGATAACTGTAATCCCCGTCCTGTTGCCGTGCCGGGCCAATATGCGTGATACCGTTTGCCACAT > NC_000913/443830‑444124 | tCACGCAAATCTTCTGCTGAAGTATGATGCCCTTCGCGTTCGATCACCGCCGCGACTTCTTCGCATATCTGCATAATTTCTTGCGGATGATGACGTAATTCACCGTTCGGGCAATTCCAGATGGCAGTCAGTGGATTAATCACGCAGtt < 8:45973/149‑1 (MQ=255) gatgCCCTTCGCGTTCGATCACCGCCGCGACTTCTTCGCATATCTGCATAATTTCTTGCGGATGATGACGTAATTCACCGTTCGGGCAATTCCAGATGGCAGTCAGTGGATTAATCACGCAGTTGACTGCCAGCTTGCGCCACAGCTCg > 8:148898/1‑149 (MQ=255) gcgTTCGATCACCGCCGCGACTTCTTCGCATATCTGCATAATTTCTTGCGGATGATGACGTAATTCACCGTTCGGGCAATTCCAGATGGCAGTCAGTGGATTAATCACGCAGTTGACTGCCAGCTTGCGCCACAGCTCGGCGCGAatat < 7:148898/149‑1 (MQ=255) ttCGATCACCGCCGCGACTTCTTCGCATATCTGCATAATTTCTTGCGGATGATGACGTAATTCACCGTTCGGGCAATTCCAGATGGCAGTCAGTGGATTAATCACGCAGTTGACTGCCAGCTTGCGCCACAGCTCGGCGCGAATATTGt > 2:87874/1‑149 (MQ=255) gATCACCGCCGCGACTTCTTCGCATATCTGCATAATTTCTTGCGGATGATGACGTAATTCACCGTTCGGGCAATTCCAGATGGCAGTCAGTGGATTAATCACGCAGTTGACTGCCAGCTTGCGCCACAGCTCGGCGCGAATATTGTTAt > 4:110037/1‑149 (MQ=255) ttcttcGCATATCTGCATAATTTCTTGCGGATGATGACGTAATTCACCGTTCGGGCAATTCCAGATGGCAGTCAGTGGATTAATCACGCAGTTGACTGCCAGCTTGCGCCACAGCTCGGCGCGAATATTGTTATGCCAGGCAACGTCAg > 2:137346/1‑149 (MQ=255) ttcttcGCATATCTGCATAATTTCTTGCGGATGATGACGTAATTCACCGTTCGGGCAATTCCAGATGGCAGTCAGTGGATTAATCACGCAGTTGACTGCCAGCTTGCGCCACAGCTCGGCGCGAATATTGTTATGCCAGGCAACGTCAg > 4:104948/1‑149 (MQ=255) ttcttcGCATATCTGCATAATTTCTTGCGGATGATGACGTAATTCACCGTTCGGGCAATTCCAGATGGCAGTCAGTGGATTAATCACGCAGTTGACTGCCAGCTTGCGCCACAGCTCGGCGCGAATATTGTTATGCCAGGCAACGTCAg > 4:12091/1‑149 (MQ=255) cGCATATCTGCATAATTTCTTGCGGATGATGACGTAATTCACCGTTCGGGCAATTCCAGATGGCAGTCAGTGGATTAATCACGCAGTTGACTGCCAGCTTGCGCCACAGCTCGGCGCGAATATTGTTATGCCAGGCAACGTCAGGCaa < 5:131689/148‑1 (MQ=255) cATAATTTCTTGCGGATGATGACGTAATTCACCGTTCGGGCAATTCCAGATGGCAGTCAGTGGATTAATCACGCAGTTGACTGCCAGCTTGCGCCACAGCTCGGCGCGAATATTGTTATGCCAGGCAACGTCAGGCAACACGGTTTg < 2:60043/147‑1 (MQ=255) gCGGATGATGACGTAATTCACCGTTCGGGCAATTCCAGATGGCAGTCAGTGGATTAATCACGCAGTTGACTGCCAGCTTGCGCCACAGCTCGGCGCGAATATTGTTATGCCAGGCAACGTCAGGCAACACGGTTTGCAAAATATcc < 1:137346/146‑1 (MQ=255) ggATGATGACGTAATTCACCGTTCGGGCAATTCCAGATGGCAGTCAGTGGATTAATCACGCAGTTGACTGCCAGCTTGCGCCACAGCTCGGCGCGAATATTGTTATGCCAGGCAACGTCAGGCAACACGGTTTGCAAAATATCCGc > 5:5851/1‑146 (MQ=255) ggATGATGACGTAATTCACCGTTCGGGCAATTCCAGATGGCAGTCAGTGGATTAATCACGCAGTTGACTGCCAGCTTGCGCCACAGCTCGGCGCGAATATTGTTATGCCAGGCAACGTCAGGCAACACGGTTTGCAAAATATCCGc > 5:8255/1‑146 (MQ=255) tgaCGTAATTCACCGTTCGGGCAATTCCAGATGGCAGTCAGTGGATTAATCACGCAGTTGACTGCCAGCTTGCGCCACAGCTCGGCGCGAATATTGTTATGCCAGGCAACGTCAGGCAACACGGTTTGCAAAATATCCGCCAGATAACt < 3:110037/149‑1 (MQ=255) ttCCAGATGGCAGTCAGTGGATTAATCACGCAGTTGACTGCCAGCTTGCGCCACAGCTCGGCGCGAATATTGTTATGCCAGGCAACGTCAGGCAACACGGTTTGCAAAATATCCGCCAGATAACTGTAATCCCCGTCCTGTtgccgtgc > 5:894/1‑149 (MQ=255) agtcagtGGATTAATCACGCAGTTGACTGCCAGCTTGCGCCACAGCTCGGCGCGAATATTGTTATGCCAGGCAACGTCAGGCAACACGGTTTGCAAAATATCCGCCAGATAACTGTAATCCCCGTCCTGTTGCCGTGCCGGGCCAatat < 1:87874/149‑1 (MQ=255) tcagtGGATTAATCACGCAGTTGACTGCCAGCTTGCGCCACAGCTCGGCGCGAATATTGTTATGCCAGGCAACGTCAGGCAACACGGTTTGCAAAATATCCGCCAGATAACTGTAATCCCCGTCCTGTTGCCGTGCCGGGCCAATATGc > 5:106302/1‑149 (MQ=255) cagtGGATTAATCACGCAGTTGACTGCCAGCTTGCGCCACAGCTCGGCGCGAATATTGTTATGCCAGGCAACGTCAGGCAACACGGTTTGCAAAATATCCGCCAGATAACTGTAATCCCCGTCCTGTTGCCGTGCCGGGCCAATATGCg < 6:894/149‑1 (MQ=255) agtGGATTAATCACGCAGTTGACTGCCAGCTTGCGCCACAGCTCGGCGCGAATATTGTTATGCCAGGCAACGTCAGGCAACACGGTTTGCAAAATATCCGCCAGATAACTGTAATCCCCGTCCTGTTGCCGTGCCGGGCCAATATGCGt > 4:40831/1‑149 (MQ=255) agtGGATTAATCACGCAGTTGACTGCCAGCTTGCGCCACAGCTCGGCGCGAATATTGTTATGCCAGGCAACGTCAGGCAACACGGTTTGCAAAATATCCGCCAGATAACTGTAATCCCCGTCCTGTTGCCGTGCCGGGCCAATATGCGt < 3:40831/149‑1 (MQ=255) gATTAATCACGCAGTTGACTGCCAGCTTGCGCCACAGCTCGGCGCGAATATTGTTATGCCAGGCAACGTCAGGCAACACGGTTTGCAAAATATCCGCCAGATAACTGTAATCCCCGTCCTGTTGCCGTGCCGGGCCAATATGCGTGATa > 7:127767/1‑149 (MQ=255) ttAATCACGCAGTTGACTGCCAGCTTGCGCCACAGCTCGGCGCGAATATTGTTATGCCAGGCAACGTCAGGCAACACGGTTTGCAAAATATCCGCCAGATAACTGTAATCCCCGTCCTGTTGCCGTGCCGGGCCAATATGCGTGATAcc > 3:152112/1‑149 (MQ=255) gTTGACTGCCAGCTTGCGCCACAGCTCGGCGCGAATATTGTTATGCCAGGCAACGTCAGGCAACACGGTTTGCAAAATATCCGCCAGATAACTGTAATCCCCGTCCTGTTGCCGTGCCGGGCCAATATGCGTGATACCGTTTGCCACAt < 6:5851/149‑1 (MQ=255) gTTGACTGCCAGCTTGCGCCACAGCTCGGCGCGAATATTGTTATGCCAGGCAACGTCAGGCAACACGGTTTGCAAAATATCCGCCAGATAACTGTAATCCCCGTCCTGTTGCCGTGCCGGGCCAATATGCGTGATACCGTTTGCCACAt < 6:8255/149‑1 (MQ=255) | TCACGCAAATCTTCTGCTGAAGTATGATGCCCTTCGCGTTCGATCACCGCCGCGACTTCTTCGCATATCTGCATAATTTCTTGCGGATGATGACGTAATTCACCGTTCGGGCAATTCCAGATGGCAGTCAGTGGATTAATCACGCAGTTGACTGCCAGCTTGCGCCACAGCTCGGCGCGAATATTGTTATGCCAGGCAACGTCAGGCAACACGGTTTGCAAAATATCCGCCAGATAACTGTAATCCCCGTCCTGTTGCCGTGCCGGGCCAATATGCGTGATACCGTTTGCCACAT > NC_000913/443830‑444124 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |