| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4542690 | 65 (0.660) | 70 (0.760) | 61/268 | 0.5 | 53.0% | intergenic (+57/‑425) | fimE/fimA | tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin) |
| ? | NC_000913 | = 4542986 | 63 (0.680) | intergenic (+353/‑129) | fimE/fimA | tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin) | |||||
Only 100 of 141 total aligned reads displayed.
TCTGTGGCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGG > NC_000913/4542839‑4543133 | gaggctCGACGCATCTTCCTCATTCTTCTCTCCAAAACCCCCCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAAATGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAAtggc < 4:268669‑M2/147‑5 (MQ=255) gCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAAtggccc > 8:190662‑M2/1‑142 (MQ=255) gCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTAGTCCGCGATGCTTTCATCTATGAGTC‑AAAAtggccc < 7:408801‑M2/148‑7 (MQ=255) gACGCATCTTCCTCATTCTTCTCTCCAAAACCCACCTCAGGCAATATTAACATCTATAAATAAAGATAACAATTGAATATTAAGCCAACAAATAAACTGAAAAAGTGTGGCCGCGATGCTTTCCTCTAGGAGTC‑AAAATGGCCCCaatt > 6:299706/1‑147 (MQ=255) gACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAATGGCCCCAAAt > 7:176138/1‑149 (MQ=255) aTCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAAtggccccaattgtctt > 8:52666‑M2/1‑133 (MQ=255) aTCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAAtggccccaattgtc > 1:45456‑M2/1‑133 (MQ=255) tCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAATGGCCCCAAATGTTTCa > 3:351268/1‑149 (MQ=255) ttCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAATGGCCCCAAATGTTTCATc > 5:138541/1‑149 (MQ=255) ttCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATCCTTTCATCTATGAGTC‑AAAATGGCCCCAAATGTTTCATc > 5:314970/1‑149 (MQ=255) tCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAATGGCGCCAAATGTTtcttct > 8:121700/1‑149 (MQ=255) tCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAATGGCCCCAAATGTTTCATCt > 5:164128/1‑149 (MQ=255) ccTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAAtggccccaattgtcttgtat > 3:96204‑M2/1‑128 (MQ=255) ccTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAAtggccccaattgtcttgt > 8:324959‑M2/1‑128 (MQ=255) cTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAATGGCCCCAAATGTTTCATCttt > 3:325561/1‑149 (MQ=255) cATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAAtggccccaattgtcttgtatttat < 4:379597‑M2/149‑25 (MQ=255) cATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAAATGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAATGGCACCAAATGTTTCATCTTTTg > 5:167171/1‑149 (MQ=255) ttcttcTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAAtggccccaattgtcttgtatttattt > 3:189677‑M2/1‑123 (MQ=255) ttcttcTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAATGGCCCCAAATGTTTCATCTTTTggg < 1:279312/149‑1 (MQ=255) catcactcCAATAAACACCTCCAGCAATATAAACATCTATTAATAACGATAACCATAGAATAATAAGACAACAAATATACTGTAAACGTTTGTCCGCGATGCGTTCCTCTATGAGTC‑AAAATGGCCCCAAATGTTTTATCTTTTgggg < 6:326300/143‑1 (MQ=255) ctctcCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAAtggccccaattgtcttgtatttatttgtttt < 4:334356‑M2/149‑32 (MQ=255) tcCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAAtggccccaattgtcttgtatttatttgttttta < 4:212342‑M2/148‑34 (MQ=255) cAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACtgt > 5:384061/1‑149 (MQ=255) cAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACt < 6:75296/147‑1 (MQ=255) aaaaaCCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACtgtg < 6:214093/149‑1 (MQ=255) aaCCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAAtggccccaattgtcttgtatttatttgtttttttaactt < 4:209561‑M2/148‑40 (MQ=255) accTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGtt < 1:106446/149‑1 (MQ=255) accTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGtt < 1:59135/149‑1 (MQ=255) cTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAAtggccccaatt < 5:245963‑M2/114‑12 (MQ=255) cTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAAtggccccaatt > 6:245963‑M2/1‑103 (MQ=255) tCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCAGCGATGCTTTCCTCTATGAGTC‑AAAAtggccccaattgtcttgaatttatttgtttttttaactttattatc < 3:72676‑M2/148‑47 (MQ=255) cATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAAtggccccaattgtcttgtatttatttgtttttttaactttattatcaa < 2:60635‑M2/149‑49 (MQ=255) cATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTgg > 4:60949/1‑147 (MQ=255) aaTATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAAtggccccaattgtcttgtatttatttgtttttttaactttattatcaataagt < 1:210566‑M2/149‑54 (MQ=255) atatAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAAtggccccaattgtcttgtatttatttgtttttttaactttattatcaataagtt > 2:210566‑M2/1‑95 (MQ=255) aaCATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCg < 6:138541/148‑1 (MQ=255) aaCATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGt < 1:237303/149‑1 (MQ=255) aTCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTAAGAGTC‑AAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAAAAGTGAAGTGTTGGCAGTCAAACTCGttt > 4:281964/1‑148 (MQ=255) cTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAAtggccccaattgtcttgtatttatttgtttttttaactttattatcaataagttaaatcaaacc < 8:322905‑M2/149‑65 (MQ=255) tataAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAAtggccccaattgtcttgtatttatttgtttttttaacttt < 3:233806‑M2/124‑41 (MQ=255) taaataaaGATAACCATAGAATAGTAAGCCACCAAATAACCTGAAAAAGGTTGTCCGCGATGCTTTCCTCTCTGAGTC‑AAAAtggccccaattgtcttgtatttatttgtttttttaactttattatcaataagttaaatcaaacctct > 4:202022‑M2/1‑82 (MQ=255) taaataaaGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAAtggccccaattgtcttgtatttatttgtttttttaactttattatcaataagttaaatcaaac > 7:386055‑M2/1‑82 (MQ=255) aaataaaGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAAtggccccaattgtcttgtatttatttgtttttttaactttattatcaataagttaaatcaaacctctt < 5:402571‑M2/149‑69 (MQ=255) aataaaGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAAtggccccaattgtcttgtatttatttgtttttttaactttattatcaataagttaaatcaaacctctt > 8:237172‑M2/1‑80 (MQ=255) aataaaGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAAtggccccaattgtcatgtatttatttgtttttttaactttattatcaataagttaaatcaaacctctt > 5:95592‑M2/1‑80 (MQ=255) aataaaGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTacaaaac < 7:386810/148‑1 (MQ=255) ataaaGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAAtggccccaattgtcttgtatttatttgtttttttaactttattatcaataagttaaatcaaacctcttct > 5:363843‑M2/1‑79 (MQ=255) ataaaGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAAtggccccaattgtcttgtatttatttgtttttttaactttattatcaataagttaaatcaaacctcttct < 2:133854‑M2/149‑71 (MQ=255) ataaaGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTgg > 1:366584/1‑125 (MQ=255) ataaaGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTgg < 2:366584/125‑1 (MQ=255) aaGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAg < 3:282617/148‑1 (MQ=255) aaGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAg < 4:351268/148‑1 (MQ=255) aTAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAAtggccccaattgtcttgtatttatttgtttttttaactttattatcaataagttaaatcaaacctcttctcttttt > 3:334356‑M2/1‑73 (MQ=255) aTAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTa > 6:267154/1‑149 (MQ=255) aCAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGAGATGCTTTCATCTATGAGTC‑AAAAtggccccaattgtcttgtatttatttgtttttttaactttattatcaataagttaaatcaaacctcttctctttttaa > 1:334786‑M2/1‑70 (MQ=255) cAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAAtggccccaattgtcttgtatttatttgtttttttaactttattatcaataagttaaatcaaacctcttctctttttaatt < 2:95208‑M2/149‑81 (MQ=255) cAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAg > 7:252192/1‑148 (MQ=255) aaTATTACGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGATTTCCTCTAAGAGTC‑AAAATGGACCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACt > 7:293153/1‑149 (MQ=255) aaTATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTCAAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGAc > 3:35091/1‑149 (MQ=255) aaTATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAAtggccccaattgtcttgtatttatttgtttttttaactttattatcaataagttaaatcaaacctcttctctttttaatttttcgt < 4:380473‑M2/149‑87 (MQ=255) atatTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAAtggccccaattgtcttgtatttatttgtttttttaactttattatcaataagttaaatcaaacctcttctctttttaatttttcgt > 1:133854‑M2/1‑62 (MQ=255) tatTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAAtggccccaattgtcttgtatttatttgtttttttaactttattatcaataagttaaatcaaacctcttctctttttaatttttcgttt > 3:209561‑M2/1‑61 (MQ=255) ttAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAAtggccccaattgtcttgtatttatttgtttttttaactttattatcaataagttaaatcaaacctcttctctttttaatttttcgtttat > 2:160117‑M2/1‑59 (MQ=255) ttAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGccc < 8:176138/149‑1 (MQ=255) ttAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGccc < 3:60949/149‑1 (MQ=255) aaGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCAt > 3:91682/1‑149 (MQ=255) aGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAAtggccccaattgtcttgtatttatttgtttttttaactttattatcaataagttaaatcaaacctcttctctttttaatttttcgtttat < 3:292768‑M2/146‑91 (MQ=255) gCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAAtggccccaattgtcttgtatttatttgtttttttaactttattatcaataagttaaatcaaacctcttctctttttaatttttcg < 6:27655‑M2/140‑86 (MQ=255) aaTAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTa < 4:325561/149‑1 (MQ=255) aTAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAAtggccccaattgtcttgtatttatttgtttttttaactttattatcaataagttaaatcaaacctc > 4:325792‑M2/1‑47 (MQ=255) aTAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAAtggccccaattgtcttgtatttatttgtttttttaactttattatcaataagttaaatcaaacctc < 3:325792‑M2/113‑67 (MQ=255) aTAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAAtggacccaattgtcttgtatttatttgtttttttaactttattatcaaaaagtaaaatcaaacctcttctatttttaatttttcgtttatgagattatttct < 3:193939‑M2/149‑103 (MQ=255) aaaCTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGa > 1:171805/1‑148 (MQ=255) acctcAAACAGTGTGGCCGCGATGCGTCCCTCTCTCAGTC‑AAAAcgcccccaattgtcatgtctttatttgtttttttaactttattctcaataagttaaatcaaacctcttctctttttaatttttcgtttatgagattatttctttc > 2:333658‑M2/3‑44 (MQ=255) aCTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAAtggccccaattgtcttgtatttatttgttt > 7:209871‑M2/1‑43 (MQ=255) tGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAAtggccccaattgtcttgtatttatttgtttttttaactttattatcaataagttaaatcaaacctcttctctttttaatttttcgtttatgagattatttctttccc < 2:65022‑M2/148‑108 (MQ=255) gAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAAtggccccaattgtcttgtatttatttgtttttttaactttattatcaataagttaaatcaaacctcttctctttttaatttttcgtttatgagattatttctttccca < 7:340522‑M2/148‑109 (MQ=255) aaaaaGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAAtggccccaattgtcttgtatttatttgtttttttaactttattatcaataagttaaatcaaacctcttctctttttaatttttcgtttatgagattatttctttccc > 1:65022‑M2/1‑39 (MQ=255) aaaGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGtttt < 4:153195/149‑1 (MQ=255) aaGTTTGTCCGAGATGCTTTCCTCTATGAGTC‑AATAtgtccccaattgtcttgtatttatttgtttttttaactttattataaataagttaaatcaaaactcttctctttttaatttttcgtttatgagattatttctttcccataatc > 4:72676‑M2/1‑36 (MQ=255) aGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGtttttt < 5:267154/149‑1 (MQ=255) ttttgTCCGAGATGCTTTCATCTATGAGTC‑AAAAttgccccaattgtcttgtatttatttgtttttttaactttattatcaataagttaaatcaaacctcttctctttttaatttttcgtttatgagattatttcttacccataatccg > 5:299419‑M2/2‑34 (MQ=255) gTCCGCGATGCTTTCCTCTATGAGTC‑AAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaaag > 7:295704/1‑149 (MQ=255) gTCCGCGATGCTTTCCTCTATGAGTC‑AAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaaa < 1:228212/148‑1 (MQ=255) tCCGCGATGCTTTCCTCTATGAGTCAAAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaaa < 4:35091/148‑1 (MQ=255) tCCGCGATGCTTTCCTCTATGAGTC‑AAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaaag > 5:132553/1‑148 (MQ=255) cgcgATGCTTTCCTCTATGAGTC‑AAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTgaaagga < 8:252192/148‑1 (MQ=255) cgcgATGCTTTCCTCTATGAGTC‑AAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTAGATTTAGAAATAGTTTTTTgaaagga > 2:405863/1‑148 (MQ=255) gcgATGCTTTCCTCTATGAGTC‑AAAAtggccccaattgtcttgtatttatttgtttttttaactttattatcaataagttaaatcaaacctcttctctttttaatttttcgtttatgagattatttctttcccataatccggcaaaacg > 6:209649‑M2/1‑26 (MQ=255) cTTTCCTCTATGAGTC‑AAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAgcagca > 1:25646/1‑149 (MQ=255) tttCCTCTATGAGTC‑AAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCAt > 6:334789/1‑149 (MQ=255) tttCCTCTATGAGTC‑AAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCAt > 2:269016/1‑149 (MQ=255) ctctATGAGTC‑AAAAtggccccaattgtcttgtatttatttgtttttttaactttattatcaataagttaaatcaaacctcttcactttttaatttttcgtttatgagattatttctttcccataatccggcaaaacgagcagcattac < 3:55632‑M2/149‑135 (MQ=255) tGAGTC‑AAAAtggccccaattgtcttgtatttatttgtttttttaactttattatcaataagttaaatcaaacctcttctctttttaatttttcgtttatgagattatttctttcccataatccggcaaaacgagcagcattactggcg > 7:322905‑M2/1‑10 (MQ=255) tGAGTC‑AAAATTGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTaa < 3:281964/149‑1 (MQ=255) aGTC‑AAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTaaaa < 5:267147/149‑1 (MQ=255) aGTC‑AAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTaaaa < 4:91682/149‑1 (MQ=255) gTC‑AAAAtggccccaattgtcttgtatttatttgtttttttaactttattatcaataagttaaatcaaacctcttctctttttaatttttcgtttatgagattatttctttcccataatacggcaaaacgagcagcattactggcggta < 8:53586‑M2/149‑143 (MQ=255) aaaatggccccaattgtcttgtatttatttgtttttttaactttattatcaataagttaaatcaaacctcttctctttttaatttttcgtttatgagattatttctttcccataatccggcaaaacgagcagcattactggcggtataa < 4:264038‑M2/149‑146 (MQ=255) aaTGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTgg < 7:121700/149‑1 (MQ=255) | TCTGTGGCTCGACGCATCTTCCTCATTCTTCTCTCCAAAAACCACCTCATGCAATATAAACATCTATAAATAAAGATAACAATAGAATATTAAGCCAACAAATAAACTGAAAAAGTTTGTCCGCGATGCTTTCCTCTATGAGTC‑AAAATGGCCCCAAATGTTTCATCTTTTGGGGGAAAACTGTGCAGTGTTGGCAGTCAAACTCGTTTACAAAACAAAGTGTACAGAACGACTGCCCATGTCGATTTAGAAATAGTTTTTTGAAAGGAAAGCAGCATGAAAATTAAAACTCTGG > NC_000913/4542839‑4543133 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |