Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 4,175,316 IS2 (–) +5 bp intergenic (‑290/‑68) coaA ← / → thrU pantothenate kinase/tRNA‑Thr

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3186096 =NA (NA)151 (1.320) 105/270 0.0 100% noncoding (1/1331 nt) IS2 repeat region
?NC_000913 4175316 = 0 (0.000)intergenic (‑290/‑72) coaA/thrU pantothenate kinase/tRNA‑Thr
* ? NC_000913 = 41753200 (0.000)132 (1.150) 78/272 0.4 100% intergenic (‑294/‑68) coaA/thrU pantothenate kinase/tRNA‑Thr
?NC_000913 = 4499511 NA (NA)noncoding (1331/1331 nt) IS2 repeat region

Only 100 of 291 total aligned reads displayed.

AAGCAATGTGACAGATATTCCATCTGATAAAAAGAATTATGGTTTAGCAGGAGCGCATTGTTGAGCACAATGATGTTGAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGTTTCTTCATCGTGTCGCATAAAATGTGACCAATAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCGCATGTCTCCATAGAATGCGCGCTACTTGATGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAG  >  NC_000913/4175177‑4175468
                                                                                                                                               |                                                                                                                                                    
aaGCAATGTGACAGATATTCCATCTGATAAAAAGAATTATGGTTTAGCAGGAGCGCATTGTTGAGCACAATGATGTTGAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGTTTCTTCATCGTGTCGCATAAAATGTGACCAATtggat                                                                                                                                                 >  1:450669‑M1/1‑144 (MQ=255)
  gtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCAATAAAACa                                                                                                                                                >  6:161718‑M2/138‑148 (MQ=255)
  gCAATGTGACAGATATTCCATCTGATAAAAAGAATTATGGTTTAGCAGGAGCGCATTGTTGAGCACAATGATGTTGAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGTTTCTTCATCGTGTCGCATAAAATGTGACCAATtggattt                                                                                                                                               <  2:450669‑M1/149‑8 (MQ=255)
    gtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagttttaagaatatctcttatttaagtgatattggttgtctggagattcagggggcgattctaCCAATAAAACAAAt                                                                                                                                             >  1:74403‑M2/136‑149 (MQ=255)
      tgtgACAGATATTCCATCTGATAAAAAGAATTATGGTTTAGCAGGAGCGCATTGTTGAGCACAATGATGTTGAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGTTTCTTCATCGTGTCGCATAAAATGTGACCAATtggatttgccc                                                                                                                                           <  8:18449‑M1/149‑12 (MQ=255)
       gtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCAATaaaa                                                                                                                                                  >  3:103241‑M2/133‑141 (MQ=255)
          aCAGATATTCCATCTGATAAAAAGAATTATGGTTTAGCAGGAGCGCATTGTTGAGCACAATGATGTTGAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGTTTCTTCATCGTGTCGCATAAAATGTGACCAATtggatttgcccctat                                                                                                                                       <  3:404451‑M1/149‑16 (MQ=255)
          aCAGATATTCCATCTGATAAAAAGAATTATGGTTTAGCAGGAGCGCATTGTTGAGCACAATGATGTTGAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGTTTCTTCATCGTGTCGCATAAAATGTGACCAATtggatttgccccta                                                                                                                                        <  3:161603‑M1/148‑15 (MQ=255)
           gccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattgggtctctggatattcagggggccagtctaCCAATAAAAAAACTTATGCaa                                                                                                                                      >  4:51549‑M2/129‑149 (MQ=255)
            aGATATTCCATCTGATAAAAAGAATTATGGTTTAGCAGGAGCGCATTGTTGAGCACAATGATGTTGAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGTTTCTTCATCGTGTCGCATAAAATGTGACCAATtggatttgcccctatat                                                                                                                                     >  5:156979‑M1/1‑132 (MQ=255)
             cgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCAATAAAACAAATTATGCAAtt                                                                                                                                    >  7:146156‑M2/127‑149 (MQ=255)
             cgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacgtatttaagtgatattggttgtctggagattcagggggccagtctaCCAATAAAACAAATTATGCAAtt                                                                                                                                    >  3:284854‑M2/127‑149 (MQ=255)
                atTCCATCTGATAAAAAGAATTATGGTTTAGCAGGAGCGCATTGTTGAGCACAATGATGTTGAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGTTTCTTCATCGTGTCGCATAAAATGTGACCAATtggatttgcccctatatttc                                                                                                                                  >  7:125575‑M1/1‑128 (MQ=255)
                   cgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCAATAAAACAAATTATGCAATTTTTTa                                                                                                                               <  1:142164‑M2/28‑1 (MQ=255)
                    cATCTGATAAAAAGAATTATGGTTTAGCAGGAGCGCATTGTTGAGCACAATGATGTTGAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGTTTCTTCATCGTGTCGCATAAAATGTGACCAATtggatttgcccctatatttcca                                                                                                                                <  1:340015‑M1/146‑23 (MQ=255)
                         tccggccctaagacgtcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCAt                                                                                                                        >  3:327379‑M2/115‑149 (MQ=255)
                          aTAAAAAGAATTATGGTTTAGCAGGAGCGCATTGTTGAGCACAATGATGTTGAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGTTTCTTCATCGTGTCGCATAAAATGTGACCAATtggatttgcccctatatttccagacatct                                                                                                                         <  2:162800‑M1/147‑30 (MQ=255)
                          aTAAAAAGAATTATGGTTTAGCAGGAGCGCATTGTTGAGCACAATGATGTTGAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGTTTCTTCATCGTGTCGCATAAAATGTGACCAATtggatttgcccctatatttccagacat                                                                                                                           <  4:62952‑M1/145‑28 (MQ=255)
                           cggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCAt                                                                                                                        <  6:238378‑M2/35‑1 (MQ=255)
                           cggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCAt                                                                                                                        <  7:469413‑M2/35‑1 (MQ=255)
                           cggccctaagacatcaatcatctgtgctccactgacttgtctaaaaactagtattaagactctcacttatttaagtgatattggttgtctggagattcacggggccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCAt                                                                                                                        <  5:226658‑M2/35‑1 (MQ=255)
                            ggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCATGaa                                                                                                                     <  2:350900‑M2/38‑1 (MQ=255)
                             aaaaGAATTATGGGTGAGCAGGAGCGCTGTGTTGCGCACAATGATGTTGACAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGTTTCTTCATCGTGTCGCATAAAATGTGACCAATtggctttgcccctctatttccagacatctgttat                                                                                                                    <  4:352885‑M1/149‑35 (MQ=255)
                              aaaGAATTATGGTTTAGCAGGAGCGCATTGTTGAGCACAATGATGTTGAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGTTTCTTCATCGTGTCGCATAAAATGTGACCAATtggatttgcccctatatttccagacatctgttatc                                                                                                                   <  2:206350‑M1/149‑36 (MQ=255)
                              aaaGAATTATGGTTTAGCAGGAGCGCATTGTTGAGCACAATGATGTTGAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGTTTCTTCATCGGGTCGCATAAAATGTGCCCAATtggatttgcccctatatttccagacatcggttat                                                                                                                    >  8:364228‑M1/1‑114 (MQ=255)
                               cctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCATGAACTc                                                                                                                  <  8:146156‑M2/41‑1 (MQ=255)
                                ctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCg                                                                                                                 >  3:393035‑M2/108‑149 (MQ=255)
                                  aaTTATGGTTTAGCAGGAGCGCATTGTTGAGCACAATGATGTTGAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGTTTCTTCATCGTGTCGCATAAAATGTGACCAATtggatttgcccctatatttccagacatctg                                                                                                                        >  5:500747‑M1/1‑110 (MQ=255)
                                  aaTTATGGTTTAGCAGGAGCGCATTGTTGAGCACAATGATGTTGAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGTTTCTTCATCGTGTCGCATAAAATGTGACCAATtggatttgcccctatatttccagacatctg                                                                                                                        <  6:500747‑M1/140‑31 (MQ=255)
                                           ttAGCAGGAGCGCATTGTTGAGCACAATGATGTTGAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGTTTCTTCATCGTGTCGCATAAAATGTGACCAATtggatttgcccctatatttccagacatctgttatcacttaacccatta                                                                                                      >  4:104346‑M1/1‑101 (MQ=255)
                                            tcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCAATAAAACAAATTATGc                                                                                                                                        <  8:413191‑M2/19‑1 (MQ=255)
                                            tcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCAATAAAACAAATTATGc                                                                                                                                        >  7:413191‑M2/96‑114 (MQ=255)
                                               tctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCGCATGTCTCCATAGaa                                                                                                  >  1:55566‑M2/93‑149 (MQ=255)
                                                ctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCGCATGTCTCCATAGAAt                                                                                                 >  5:96055‑M2/92‑149 (MQ=255)
                                                 tgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCGCATGtct                                                                                                          <  1:202599‑M2/49‑1 (MQ=255)
                                                        caatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCGCATGTCTCCATAGAATGCGCGCTa                                                                                         >  1:43084‑M2/84‑149 (MQ=255)
                                                        caatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCGCATGTCTCCATAGAATGCGCGCTa                                                                                         >  8:512922‑M2/84‑149 (MQ=255)
                                                        aTTGTTGAGCACAATGATGTTGAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGTTTCTTCATCGTGTCGCATAAAATGTGACCAATtggatttgcccctatatttccagacatctgttatcacttaaccca                                                                                                         >  8:252074‑M1/1‑88 (MQ=255)
                                                         aatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggacagtctaCCAATAAAACAAATTATGAAATTTTTTAGTTGCATGAACTCGAATGTCTCCATAGAATTAGCGCTAc                                                                                        >  5:356413‑M2/83‑149 (MQ=255)
                                                            ttgAGCACAATGATGTTGAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGTTTCTTCATCGTGTCGCATAAAATGTGACCAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgca                                                                                      <  3:222488‑M1/148‑65 (MQ=255)
                                                             tgAGCACAATGATGTTGAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGTTTCTTCATCGTGTCGCATAAAATGTGACCAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaa                                                                                                   >  4:203221‑M1/1‑83 (MQ=255)
                                                              ctagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCGCATGTCTCCATAGAATGCGCGCTACTTGAt                                                                                   >  7:493271‑M2/78‑149 (MQ=255)
                                                                 gtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCGCATGTCTCCATAGAATGCGCGCTACTTGATGcc                                                                                >  3:180325‑M2/75‑149 (MQ=255)
                                                                    taaaaactagtattaagactatcacttatttaagtgatattcgttgtctggagattcagggggccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCGCATGTCTCCATAGAATGCGCGCTACTTGATGCCGAc                                                                             >  4:431538‑M2/72‑149 (MQ=255)
                                                                       aaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCAATAAAACAAATTATGc                                                                                                                                        >  1:508708‑M2/69‑87 (MQ=255)
                                                                           ttGAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGTTTCTTCATCGTGTCGCATAAAATGTGACCAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggc                                                                        >  2:119492‑M1/1‑69 (MQ=255)
                                                                              aaaaaGTGTGCTAATCTGCCCTCCGTTCGGCTGTTTCTTCATCGTGTCGCATAAAATGTGACCAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagc                                                                    >  2:504969‑M1/1‑66 (MQ=255)
                                                                              aaaaaGTGTGCTAATCTGCCCTCCGTTCGGCTGTTTCTTCATCGTGTCGCATAAAATGTGACCAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgca                                                                                      <  7:226390‑M1/130‑65 (MQ=255)
                                                                                ttaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCGCATGTCTCCATAGAATGCGCGCTACTTGAt                                                                                   <  5:115727‑M2/72‑1 (MQ=255)
                                                                                   gtgtGCTAATCTGCCCTCCGTTCGGCTGTTTCTTCATCGTGTCGCATAAAATGTGACCAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataac                                                              <  7:35782‑M1/149‑89 (MQ=255)
                                                                                   agactatcacttattttagtgatattggttgtctggagattcagggggccagtctaCCAATAAAACAATTTATGCAATTTTTTAGTTGCATGAACTCGCATGTCTCCATAGAATGCGCGCTACTTGATGCCGACTTAGCTCAgtaggt                                                               <  3:51549‑M2/92‑1 (MQ=255)
                                                                                        cTAATCTGCCCTCCGTTCGGCTGTTTCTTCATCGTGTCGCATAAAATGTGACCAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccag                                                          <  6:284989‑M1/148‑93 (MQ=255)
                                                                                         tcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCGCATGTCTCCATAGAATGCGCGCTACTTGATGCCGACTTAGCTCAgta                                                                  >  3:83631‑M2/51‑139 (MQ=255)
                                                                                           acttatttaagtgatattggttgtctggagattcagggggccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCGCATGTCTCCa                                                                                                       <  1:312653‑M2/52‑1 (MQ=255)
                                                                                           acttatttaagtgatattggttgtctggagattcagggggccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCGCATGTCTCCa                                                                                                       >  2:312653‑M2/49‑100 (MQ=255)
                                                                                           acttatttaagtgatattggttgtctggagattcagggggccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCGCATGTCTCCATAGAATGCGCGCTACTTGATGCCGACTTAGCTCAGTAGGTAGAGCAAc                                                       <  2:55566‑M2/100‑1 (MQ=255)
                                                                                            cttatttaagtgatattggttgtctggagattcagggggccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCGCATGTCTCCATAGAATGCGCGCTACTTGATGCCGACTTAGCTCAGTAGGTAGAGCAACt                                                      >  1:385064‑M2/48‑148 (MQ=255)
                                                                                                tttaagtgatattggttgtctggagattcagggggccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCGCATGTCTCCATAGAATGCGCGCTACTTGATGCCGACTTAGCTCAGTAGGTAGAGCAACTGACtt                                                 <  4:393035‑M2/106‑1 (MQ=255)
                                                                                                tttaagtgatattggttgtctggagattcagggggccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCGCATGTCTCCATAGAATGCGCGCTACTTGATGCCGACTTAGCTCAGTAGGTAGAGCAACTGACtt                                                 <  5:163808‑M2/106‑1 (MQ=255)
                                                                                                tttaagtgatattggttgtctggagattcagggggccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCGCATGTCTCCATAGAATGCGCGCTACTTGATGCCGACTTAGCTCAGTAGGTAGAGCAACTGACt                                                  <  7:512922‑M2/105‑1 (MQ=255)
                                                                                                tttaagtgatattcgttgtctggagattcagggggccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCGCATGTCTCCATAGAATGCGCGCTACTTGATGCCGACTTAGCTCAGTAGGTAGAGCAACTGACtt                                                 <  3:431538‑M2/106‑1 (MQ=255)
                                                                                                cccTCCGTTCGGCTGTTTCTTCATCGTGTCGCATAAAATGTGACCAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactat                                                  <  1:119492‑M1/148‑101 (MQ=255)
                                                                                                  cTCCGTTCGGCTGTTTCTTCATCGTGTCGCATAAAATGTGACCAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatat                                                                                 <  8:77281‑M1/115‑70 (MQ=255)
                                                                                                  cTCCGTTCGGCTGTTTCTTCATCGTGTCGCATAAAATGTGACCAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatat                                                                                 >  7:77281‑M1/1‑46 (MQ=255)
                                                                                                   tCCGTTCGGCTGTTTCTTCATCGTGTCGCATAAATGTGACCAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgca                                                      >  4:322148‑M1/1‑44 (MQ=255)
                                                                                                   aagtgatattggttgtctggagattcagggggccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCGCATGTCTCCATAGAATGCGCGCTACTTGATGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGt                                               >  4:178817‑M2/41‑148 (MQ=255)
                                                                                                    agtgatattggttgtctggagattcagggggccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCGCATGTCTCCATAGAATGCGCGCTACTTGATGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTaa                                             >  3:37381‑M2/40‑149 (MQ=255)
                                                                                                    agtgatattggttgtctggagattcagggggccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCGCATGTCTCCATAGAATGCGCGCTACTTGATGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTa                                              >  2:384093‑M2/40‑148 (MQ=255)
                                                                                                    agtgatattggttggctggagattcagggggccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCGCATCTCTCCATAGAATGCGCGCTACATGATGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTa                                              <  2:67106‑M2/109‑1 (MQ=255)
                                                                                                     gtgatattggttgtctggagattcagggggccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCGCATGTCTCCATAGAATGCGCGCTACTTGATGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAAt                                            <  8:487234‑M2/111‑1 (MQ=255)
                                                                                                          attggttgtctggagattcagggggccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCGCATGTCTCCATAGAATGCGCGCTACTTGATGCCGACTTAGCTCAgtaggta                                                              <  6:422758‑M2/93‑1 (MQ=255)
                                                                                                           ttggttgtctggagattcagggggccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCGCATGTCTCCATAGAATGCGCGCTACTTGATGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAg                                      <  4:37381‑M2/117‑1 (MQ=255)
                                                                                                            cTGTTTCTTCATCGTGTCGCATAAAATGTGACCAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattc                                     <  6:48354‑M1/149‑114 (MQ=255)
                                                                                                            cTGTTTCTTCATCGTGTCGCATAAAATGTGACCAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgcca                                        >  5:345165‑M1/1‑36 (MQ=255)
                                                                                                            cTGTTTCTTCATCGTGTCGCATAAAATGTGACCAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgcca                                        <  6:345165‑M1/146‑111 (MQ=255)
                                                                                                              gttgtctggagattcagggggccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCGCATGTCTCCATAGAATGCGCGCTACTTGATg                                                                                  >  8:115790‑M2/30‑102 (MQ=255)
                                                                                                               tttCTTCATCGTGTCGCATAAAATGTGACCAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgtt                                  <  6:174233‑M1/149‑117 (MQ=255)
                                                                                                               tttCTTCATCGTGTCGCATAAAATGTGACCAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgtt                                  <  2:510021‑M1/149‑117 (MQ=255)
                                                                                                                  tctggagattcagggggccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCGCATGTCTCCATAGAATGCGCGCTACTTGATGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCAc                                 >  6:401498‑M2/26‑147 (MQ=255)
                                                                                                                      gagattcagggggccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCGCATGTCTCCATAGAATGCGCGCTACTTGATGCCGACTTAGCTCAGTAGGTAGAGCAACTGAc                                                   >  7:113642‑M2/22‑125 (MQ=255)
                                                                                                                       tCGTGTCGCATAAAATGTGACCAATtggatttgcccctatatttcagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctc                          <  5:396802‑M1/149‑125 (MQ=255)
                                                                                                                        gattcagggggccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCGCATGTCTCCATAGAATGCGCGCTACTTGATGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGa                         <  7:258468‑M2/130‑1 (MQ=255)
                                                                                                                        gattcagggggccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCGCATGTCTCCATAGAATGCGCGCTACTTGATGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGa                         >  5:276361‑M2/20‑149 (MQ=255)
                                                                                                                         gtgtCGCATAAAATGTGACCAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctc                         <  8:125575‑M1/148‑126 (MQ=255)
                                                                                                                             agggggccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCGCATGTCTCCATAGAATGCGCGCTACTTGATGc                                                                                 >  7:429686‑M2/15‑88 (MQ=255)
                                                                                                                             agggggccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCGCATGTCTCCATAGAATGCGCGCTACTTGATGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCg                    <  4:235916‑M2/135‑1 (MQ=255)
                                                                                                                                gggccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCGCATGTCTCCATAGAATGCGCGCTACTTGATGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTa                 <  6:384517‑M2/138‑1 (MQ=255)
                                                                                                                                  gccagtctaCCAATAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCGCATGTCTCCATAGAATGCGCGCTACTTGATGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGt               >  4:274835‑M2/10‑149 (MQ=255)
                                                                                                                                       gtgACCAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaag          >  5:465533‑M1/1‑9 (MQ=255)
                                                                                                                                        tgACCAATtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaagg         <  8:432416‑M1/149‑142 (MQ=255)
                                                                                                                                            cAATAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCGCATGTCTCCATAGAATGCGCGCTACTTGATGCCGACTTAGCTCAGTAGGTAGAGCAACTGAc                                                   <  2:265848/103‑1 (MQ=255)
                                                                                                                                            cAATAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCGCATGTCTCCATAGAATGCGCGCTACTTGATGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCAt      >  7:303147/1‑148 (MQ=255)
                                                                                                                                             aaTtggattttccactatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataaccaagctcactatgaggatgccattcgttataattctctaaagcctatgaaaggttctt    >  6:253209‑M1/1‑3 (MQ=255)
                                                                                                                                             aaTAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCGCATGTCTCCATAGAATGCGCGCTACTTGATGCCGACTTAGCTCAGTAGGTAGAGCAACTGAc                                                   <  7:160480/102‑1 (MQ=255)
                                                                                                                                             aaTAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCGCATGTCTCCATAGAATGCGCGCTACTTGATGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGAAGTCGGCACCATc     >  3:269786/1‑148 (MQ=255)
                                                                                                                                              aTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgatagcccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctt    <  6:135572‑M1/148‑147 (MQ=255)
                                                                                                                                              aTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttcttt   <  8:323415‑M1/149‑148 (MQ=255)
                                                                                                                                              aTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttcttt   >  2:434549‑M1/1‑2 (MQ=255)
                                                                                                                                              aTtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttcttt   >  1:28429‑M1/1‑2 (MQ=255)
                                                                                                                                               ttggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagctataacccagcgcactatgcgtatgccattcgttataatgctcgaacgcctctgcaaggttctttg  <  5:421972‑M1/149‑149 (MQ=255)
                                                                                                                                               |                                                                                                                                                    
AAGCAATGTGACAGATATTCCATCTGATAAAAAGAATTATGGTTTAGCAGGAGCGCATTGTTGAGCACAATGATGTTGAAAAAGTGTGCTAATCTGCCCTCCGTTCGGCTGTTTCTTCATCGTGTCGCATAAAATGTGACCAATAAAACAAATTATGCAATTTTTTAGTTGCATGAACTCGCATGTCTCCATAGAATGCGCGCTACTTGATGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATCAAG  >  NC_000913/4175177‑4175468

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.