| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 168,350 | Δ4 bp | coding (867‑870/2244 nt) | fhuA → | ferrichrome outer membrane transporter |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 168350 | 168353 | 4 | 20 [0] | [0] 20 | fhuA | ferrichrome outer membrane transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 168349 | 0 (0.000) | 20 (0.640) | 19/266 | 0.8 | 100% | coding (866/2244 nt) | fhuA | ferrichrome outer membrane transporter |
| ? | NC_000913 | 168354 = | 0 (0.000) | coding (871/2244 nt) | fhuA | ferrichrome outer membrane transporter | |||||
GCGTTATGCTATTGCACCGGCGTTCACCTGGCGTCCGGATGATAAAACCAATTTTACCTTCCTTTCTTACTTCCAGAACGAGCCGGAAACCGGTTATTACGGCTGGTTGCCGAAAGAGGGAACCGTTGAGCCGCTGCCGAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTCAGAA > NC_000913/168215‑168478 | gcGTTATGCTATTGCACCGGCGTTCACCTGGCGTCCGGATGATAAAACCAATTTTACCTTCCTTTCTTACTTCCAGAACGAGCCGGAAACCGGTTATTACGGCTGGTTGCCGAAAGAGGGAACCGTTGAGCCGCTaacggtaagcgtct < 1:87495‑M1/149‑15 (MQ=255) gTTATGCTATTGCACCGGCGTTCACCTGGCGTCCGGATGATAAAACCAATTTTACCTTCCTTTCTTACTTCCAGAACGAGCCGGAAACCGGTTATTACGGCTGGTTGCCGAAAGAGGGAACCGTTGAGCCGCTaacggtaagcgtctgc < 4:101738‑M1/149‑17 (MQ=255) gCGTCCGGATGATAAAACCAATTTTACCTTCCTTTCTTACTTCCAGAACGAGCCGGAAACCGGTTATTACGGCTGGTTGCCGAAAGAGGGAACCGTTGAGCCGCTaacggtaa > 2:79301‑M1/1‑105 (MQ=255) ggATGATAAAACCAATTTTACCTTCCTTTCTTACTTCCAGAACGAGCCGGAAACCGGTTATTACGGCTGGTTGCCGAAAGAGGGAACCGTTGAGCCGCTaacggtaagcgtctgccgacagactttaatgaaggggcgaagaacaacac > 1:119340‑M1/1‑99 (MQ=255) tAAAACCAATTTTACCTTCCTTTCTTACTTCCAGAACGAGCCGGAAACCGGTTATTACGGCTGGTTGCCGAAAGAGGGAACCGTTGAGCCGCTaacggtaagcgtctgccgacagactttaatgaa < 8:10076‑M1/126‑34 (MQ=255) tAAAACCAATTTTACCTTCCTTTCTTACTTCCAGAACGAGCCGGAAACCGGTTATTACGGCTGGTTGCCGAAAGAGGGAACCGTTGAGCCGCTaacggtaagcgtctgccgacagactttaatgaa > 7:10076‑M1/1‑93 (MQ=255) ttACCTTCCTTTCTTACTTCCAGAACGAGCCGGAAACCGGTTATTACGGCTGGTTGCCGAAAGAGGGAACCGTTGAGCCGCTaacggtaagcgtctgccgacagactttaatgaaggggcgaagaacaacacctattctcgtaatgag < 4:52740‑M1/148‑67 (MQ=255) ttccttTCTTACTTCCAGAACGAGCCGGAAACCGGTTATTACGGCTGGTTGCCGAAAGAGGGAACCGTTGAGCCGCTaacggtaagcgtctgccgacagactttaatgaaggggcgaagaacaacacctattctcgtaatgagaagatg > 6:1890‑M1/1‑77 (MQ=255) cTTCCAGAACGAGCCGGAAACCGGTTATTACGGCTGGTTGCCGAAAGAGGGAACCGTTGAGCCGCTaacggtaagcgtctgccgacagactttaatgaaggggcgaagaacaacacctattctcgtaatgaga < 2:134472‑M1/133‑68 (MQ=255) cTTCCAGAACGAGCCGGAAACCGGTTATTACGGCTGGTTGCCGAAAGAGGGAACCGTTGAGCCGCTaacggtaagcgtctgccgacagactttaatgaaggggcgaagaacaacacctattctcgtaatgaga > 1:134472‑M1/1‑66 (MQ=255) cAGAACGAGCCGGAAACCGGTTATTACGGCTGGTTGCCGAAAGAGGGAACCGTTGAGCCGCTaacggtaagcgtctgccgacagactttaatgaaggggcgaagaacaacacctattctcgtaa < 5:586‑M1/124‑63 (MQ=255) cAGAACGAGCCGGAAACCGGTTATTACGGCTGGTTGCCGAAAGAGGGAACCGTTGAGCCGCTaacggtaagcgtctgccgacagactttaatgaaggggcgaagaacaacacctattctcgtaa > 6:586‑M1/1‑62 (MQ=255) aGAACGAGCCGGAAACCGGTTATTACGGCTGGTTGCCGAAAGAGGGAACCGTTGAGCCGCTaacggtaagcgtctgccgacagactttaatgaaggggcgaagaacaacacctattctcgtaatgagaagatggtcggctacagcttc > 6:101021‑M1/1‑61 (MQ=255) gAGCCGGAAACCGGTTATTACGGCTGGTTGCCGAAAGAGGGAACCGTTGAGCCGCTaacggtaagcgtctgccgacagactttaatgaaggggcgaagaacaacacctattctcgtaatgagaagatggtcggctacagcttcgatcac < 2:119340‑M1/149‑94 (MQ=255) gCCGGAAACCGGTTATTACGGCTGGTTGCCGGAAGAGGGAACCGTTGAGCCGCTaacggtaagcgtctgccgacagactttaatgaaggggcgaagaacaacacctattctcgtaatgagaagatggtcggctacagcttcgatcacg > 4:96161‑M1/1‑54 (MQ=255) gCCGGAAACCGGTTATTACGGCTGGTTGCCGAAAGAGGGAACCGTTGAGCCGCTaacggtaagcgtctgccgacagactttaatgaaggggcgaagaacaacacctattctcgtaatgagaagatggtcggctacagcttcgatcacg > 3:26836‑M1/1‑54 (MQ=255) cGGTTATTACGGCTGGTTGCCGGAAGAGGGAACCGTTGAGCCGCTaacggtaagcgtctgccgacagactttaatgaaggggcgaagaacaacacctattctcgtaatgagaagatggtcggctacagcttcgatcacgaatttaacga < 3:96161‑M1/149‑105 (MQ=255) ggCTGGTTGCCGAAAGAGGGAACCGTTGAGCCGCTaacggtaagcgtctgccgacagactttaatgaaggggcgaagaacaacacctattctcgtaatgagaagatggtcggctacagcttcgatcacgaatttaacgacacctttact < 5:101021‑M1/149‑115 (MQ=255) aaGAGGGAACCGTTGAGCCGCTaacggtaagcgtctgccgacagactttaatgaaggggcgaagaacaacacctattctcgtaatgagaagatggtcggctacagcttcgatcacgaatttaacgacacctttactgtgcgtcagaac > 2:35393‑M1/1‑22 (MQ=255) gagGGAACCGTTGAGCCGCTaacggtaagcgtctgccgacagactttaatgaaggggcgaagaacaacacctattctcgtaatgagaagatggtcggctacagcttcgatcacgaatttaacgacacctttactgtgcgtcagaacctg < 5:1890‑M1/149‑130 (MQ=255) | GCGTTATGCTATTGCACCGGCGTTCACCTGGCGTCCGGATGATAAAACCAATTTTACCTTCCTTTCTTACTTCCAGAACGAGCCGGAAACCGGTTATTACGGCTGGTTGCCGAAAGAGGGAACCGTTGAGCCGCTGCCGAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTCAGAA > NC_000913/168215‑168478 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |