Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC NC_000913 973,271 IS5 (+) +4 bp 40.3% coding (128‑131/780 nt) elyC ← envelope biogenesis factor; DUF218 superfamily protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 273955 =NA (NA)24 (0.350) 20/254 NT 38.6% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 973271 = 37 (0.550)coding (131/780 nt) elyC envelope biogenesis factor; DUF218 superfamily protein
* ? NC_000913 = 275149NA (NA)26 (0.380) 24/254 NT 40.5% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 = 973274 37 (0.550)coding (128/780 nt) elyC envelope biogenesis factor; DUF218 superfamily protein

GGGTTCCAGGTATAACCACCTCCGAGCACCACGATATAGTCCACTTTTTGCGAATTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACTTTTTTCAGTGTAAAAAGCATCCTTTCTGGTTCCTTTT  >  NC_000913/973124‑973418
                                                                                                                                                   |                                                                                                                                                   
gggTTCCAGGTATAACCACCTCCGAGCACCACGATATAGTCCACTTTTTGCGAATTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGc                                                                                                                                                     >  7:83806/1‑148 (MQ=255)
  gTTCCAGGTATAACCACCTCCGAGCACCACGATATAGTCCACTTTTTGCGAATTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCta                                                                                                                                                   <  8:148300/148‑1 (MQ=255)
   ttCCAGGTATAACCACCTCCGAGCACCACGATATAGTCCACTTTTTGCGAATTATTCCCTGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCt                                                                                                                                                    >  4:222698/1‑146 (MQ=255)
   ttCCAGGTATAACCACCTCCGAGCACCACGATATAGTCCACTTTTTGCGAATTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCt                                                                                                                                                    >  1:163427/1‑146 (MQ=255)
     ccAGGTATAACCACCTCCGAGCACCACGATATAGTCCACTTTTTGCGAATTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCtaat                                                                                                                                                 >  6:240558/1‑147 (MQ=255)
        ggTATAACCACCTCCGAGCACCACGATATAGTCCACTTTTTGCGAATTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATaaa                                                                                                                                              >  1:244383/1‑147 (MQ=255)
          tataACCACCTCCGAGCACCACGATATAGTCCACTTTTTGCGAATTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATaaaaa                                                                                                                                            >  2:180842/1‑147 (MQ=255)
           ataACCACCTCCGAGCACCACGATATAGTCCACTTTTTGCGAATTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATc                                                                                                                                          >  1:284544/1‑148 (MQ=255)
              accaccTCCGAGCACCACGATATAGTCCACTTTTTGCGAATTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcg                                                                                                                                        >  8:82155‑M2/1‑137 (MQ=255)
               ccaccTCCGAGCACCACGATATAGTCCACTTTTTGCGAATTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaa                                                                                                                                      >  1:278898‑M2/1‑136 (MQ=255)
                      cGAGCACCACGATATAGTCCACTTTTTGCGAATTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGtttt                                                                                                                               <  2:284544/148‑1 (MQ=255)
                         gCACCACGATATAGTCCACTTTTTGCGAATTATTCCATGTCGGATACGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAAAAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGtttttt                                                                                                                             >  3:91916/1‑147 (MQ=255)
                              acGATATAGTCCACTTTTTGCGAATTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatat                                                                                                                        <  2:104589‑M2/147‑27 (MQ=255)
                              acGATATAGTCCACTTTTTGCGAATTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAAc                                                                                                                       >  6:104762/1‑148 (MQ=255)
                              acGATATACTCCACTTTTTGCTAATTATTCCATGTCGGATAGGAGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAAAGTTCCCGGTATTTTGAAAAc                                                                                                                       >  8:286277/1‑148 (MQ=255)
                                gATATAGTCCACTTTTTGCGAATTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACgg                                                                                                                     <  5:240558/148‑1 (MQ=255)
                                aacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGAAAACgg                                                                                                                     >  5:54282‑M2/116‑148 (MQ=255)
                                      gTCCACTTTTTGCGAATTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTaaa                                                                                                                <  8:145101/147‑1 (MQ=255)
                                        ccACTTTTTGCGAATTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtt                                                                                                             <  7:187199‑M2/148‑38 (MQ=255)
                                        ccACTTTTTGCGAATTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACca                                                                                                             >  1:44482/1‑148 (MQ=255)
                                        aaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGaaa                                                                                                                         >  3:84127‑M2/108‑136 (MQ=255)
                                        aaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGaaa                                                                                                                         <  4:84127‑M2/29‑1 (MQ=255)
                                        aaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACca                                                                                                             >  2:263894‑M2/108‑148 (MQ=255)
                                        aaataggctgattcaaggcatttaagggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagcccagaagaatttccccgcttattagaaccttccCTAATAAAACTCTTCACGGTTTTTTGAAAAAGGCTAAACca                                                                                                             >  6:39181‑M2/108‑148 (MQ=255)
                                         aataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAAc                                                                                                               <  6:54282‑M2/39‑1 (MQ=255)
                                         aataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACca                                                                                                             <  7:228645‑M2/41‑1 (MQ=255)
                                          ataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACcaca                                                                                                           <  1:263894‑M2/43‑1 (MQ=255)
                                          aCTTTTTGCGAATTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACcaca                                                                                                           <  2:44482/148‑1 (MQ=255)
                                            tttttGCGAATTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgt                                                                                                          <  1:305031‑M2/147‑41 (MQ=255)
                                                tGCGAATTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatc                                                                                                      >  2:305031‑M2/1‑103 (MQ=255)
                                                    aaTTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggag                                                                                                 >  2:177309‑M2/1‑99 (MQ=255)
                                                       tattCCATGTCGGATAGGTTCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCgccaggc                                                                                               >  3:62061/1‑147 (MQ=255)
                                                       aggcatttacgggagaaaatatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCgccaggcc                                                                                              <  8:302529‑M2/56‑1 (MQ=255)
                                                       aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGttttt                                                                                                                              <  1:131157‑M2/24‑1 (MQ=255)
                                                       aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGttttt                                                                                                                              >  2:131157‑M2/93‑116 (MQ=255)
                                                          tCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtca                                                                                                        <  5:39760‑M2/135‑43 (MQ=255)
                                                          tCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtca                                                                                                        >  6:39760‑M2/1‑93 (MQ=255)
                                                           ccATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatag                                                                                           >  2:163427‑M2/1‑92 (MQ=255)
                                                           ccATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatag                                                                                           >  1:244368‑M2/1‑92 (MQ=255)
                                                              tGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCGAGCGCCa                                                                                       <  3:98343/148‑1 (MQ=255)
                                                                     gaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATca                                                                                <  2:288304‑M2/70‑1 (MQ=255)
                                                                      aGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgg                                                                                                   <  6:176149‑M2/128‑48 (MQ=255)
                                                                      aGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgg                                                                                                   >  5:176149‑M2/1‑81 (MQ=255)
                                                                      aGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCGAGCGCCAATAATca                                                                                <  4:91916/147‑1 (MQ=255)
                                                                      aGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATcaa                                                                               >  6:286024/1‑148 (MQ=255)
                                                                       ggTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAAAAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCGAGCGCCAATAATcaa                                                                               <  4:35205/147‑1 (MQ=255)
                                                                          gCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatg                                                                           >  2:315092‑M2/1‑77 (MQ=255)
                                                                          gCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcat                                                                            <  8:224206‑M2/147‑71 (MQ=255)
                                                                           atcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAacaaca                                                                          >  7:190160‑M2/73‑148 (MQ=255)
                                                                                   gggACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCgg                                                                   >  5:7953/1‑147 (MQ=255)
                                                                                   aaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGa                                                                  <  8:190160‑M2/84‑1 (MQ=255)
                                                                                    ggACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCGAGCGCCAATAATCAACAACATCAGCGGa                                                                  <  1:180842/147‑1 (MQ=255)
                                                                                    ggACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCGAGCGCCAATAATCAACAACATCAGCGGa                                                                  <  4:62061/147‑1 (MQ=255)
                                                                                    ggACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGa                                                                  <  5:286024/147‑1 (MQ=255)
                                                                                    ggACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGa                                                                  <  6:7953/147‑1 (MQ=255)
                                                                                    aacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCgg                                                                   >  7:11862‑M2/64‑146 (MQ=255)
                                                                                         gaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTgg                                                             >  4:145359‑M2/59‑147 (MQ=255)
                                                                                         gaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTgg                                                             >  4:140572‑M2/59‑147 (MQ=255)
                                                                                          agcagGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacct                                                           >  2:74215‑M2/1‑61 (MQ=255)
                                                                                             agGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatctacttaccttcg                                                        >  7:224206‑M2/1‑58 (MQ=255)
                                                                                             aaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTGgcagc                                                         >  1:64944‑M2/55‑147 (MQ=255)
                                                                                               atgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAAc                                                      <  2:64944‑M2/96‑1 (MQ=255)
                                                                                                  gTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGa                                                                  >  4:253876/1‑133 (MQ=255)
                                                                                                  gTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGa                                                                  <  3:253876/133‑1 (MQ=255)
                                                                                                  gTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACata                                                   >  5:163633/1‑148 (MQ=255)
                                                                                                    cGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacag                                                 <  4:131003‑M2/148‑98 (MQ=255)
                                                                                                     ggCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTg                                                <  2:244383/148‑1 (MQ=255)
                                                                                                          ccGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaatt                                           >  8:48623‑M2/1‑45 (MQ=255)
                                                                                                          ccGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaatt                                           >  8:187199‑M2/1‑45 (MQ=255)
                                                                                                           cGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacctt                                                          <  1:143405‑M2/132‑89 (MQ=255)
                                                                                                           cGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacctt                                                          >  2:143405‑M2/1‑44 (MQ=255)
                                                                                                              ttGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaatttagc                                       >  1:104589‑M2/1‑41 (MQ=255)
                                                                                                                 ccgagaagaatttccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCacttat                                    >  2:121181‑M2/35‑146 (MQ=255)
                                                                                                                  aaaCTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagt                                    <  5:249915‑M2/147‑111 (MQ=255)
                                                                                                                   gagaagaatttccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACtttttt                                  >  1:212028‑M2/33‑148 (MQ=255)
                                                                                                                   aaCTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACtttttt                                  >  2:9042/1‑148 (MQ=255)
                                                                                                                    aCTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaag                                 <  2:54080‑M2/148‑114 (MQ=255)
                                                                                                                    aCTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCGAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACtttttt                                  >  2:40453/1‑147 (MQ=255)
                                                                                                                        aaTAACAAGAGCTCCAGACACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCGAGCGCCAATAATCAAGAACTTCTGCGGTAGTGGCAGCAACATATTGCCTATCACTTTTTTCAgt                              <  8:83806/147‑1 (MQ=255)
                                                                                                                         aTAACAAGCGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcctcgggagccatagaccaggggtcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtacgcgccg                            <  4:98722‑M2/148‑119 (MQ=255)
                                                                                                                          tAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCGAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACTTTTTTCAgtgt                            >  7:306366/1‑147 (MQ=255)
                                                                                                                           aaCAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCgcc                                                                                                   <  7:82025/75‑1 (MQ=255)
                                                                                                                           aaCAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCgcc                                                                                                   >  8:82025/1‑75 (MQ=255)
                                                                                                                            aCAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCGAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACTTTTTTCAGTGTaa                          <  1:17181/147‑1 (MQ=255)
                                                                                                                              ccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCTCAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACTTTTTTCAGTGTaaaa                        <  3:140572‑M2/126‑1 (MQ=255)
                                                                                                                              ccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACTTTTTTCAGTGTaaaa                        <  3:145359‑M2/126‑1 (MQ=255)
                                                                                                                                 cgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTACACCACAGCAGATCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGACAATCACTTTTTTCAGTGTAAAAAGCa                    <  5:39181‑M2/130‑1 (MQ=255)
                                                                                                                                  gcgcCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACTTTTTTCAGTGTAAAAAGCAt                   <  1:9042/148‑1 (MQ=255)
                                                                                                                                       agccaCCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACTTTTTTCAGTGTAAAAAGCATCCttt              <  5:104762/148‑1 (MQ=255)
                                                                                                                                        gccaCCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACTTTTTTCAGTGTAAAAAGCATCCTTTc             <  6:163633/148‑1 (MQ=255)
                                                                                                                                         ccaCCCAATGCTAATAAAAATCCTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACTTTTTTCAGTGTAAAAAGCATCCTTTCt            >  7:44345/1‑148 (MQ=255)
                                                                                                                                             ccAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACTTTTTTCAGTGTAAAAGCATCCtt               <  7:235919/140‑1 (MQ=255)
                                                                                                                                             ccAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACTTTTTTCAGTGTAAAAGCATCCtt               >  8:235919/1‑140 (MQ=255)
                                                                                                                                                 tGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCGAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACTTTTTTCAGTGTAAAAAGCATCCTTTCTGGTTCCtt    >  2:320679/1‑148 (MQ=255)
                                                                                                                                                   cTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCGAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACttttt                                   <  5:263825/115‑1 (MQ=255)
                                                                                                                                                   cTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCGAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACttttt                                   >  6:263825/1‑115 (MQ=255)
                                                                                                                                                   cTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCGAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACTTTTTTCAGTGTAAAAAGCATCCTTTCTGGTTCCtttt  >  8:141549/1‑148 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
GGGTTCCAGGTATAACCACCTCCGAGCACCACGATATAGTCCACTTTTTGCGAATTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACTTTTTTCAGTGTAAAAAGCATCCTTTCTGGTTCCTTTT  >  NC_000913/973124‑973418

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.