New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 1929589 = | 33 (1.190) | 5 (0.190) | 5/230 | 2.8 | 14.6% | coding (119/660 nt) | yebE | DUF533 family inner membrane protein |
? | NC_000913 | 1929613 = | 27 (1.010) | coding (95/660 nt) | yebE | DUF533 family inner membrane protein | |||||
Rejected: Frequency below/above cutoff threshold. |
AAACTGTTAGTGCCAGGCGCATTAGGCGGACTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1929623‑1929589 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcACTAACAGTTTGACCAATCCCTGATCCGCAGACGAGGAGGTAGAAGAACTGCTTTGCCCAAGCAGGGATTGCAGTTGATTTAACCAGTTAGCCATATTTGCTCCTCAATAACCATTTTTAGTGC > NC_000913/1929613‑1929736 aacCTGTTAGGGCCAGGCGCCTTAGGCGGACTGGCACTAACAGTTTGACCAATCCCTGATCCGCCGACGAGGAGGTAGAAGAACTGCTTTGCCCAAGCAGGGATTGCAGTTGATTTAACCAGTTAGCCATATTTGCTC < 8:70351/135‑1 AAACTGTTAGTGCCAGGCGCATTAGGCGGACTGGCACTAACAGTTTGACCAATCCCTGATCCGCAGACGAGGAGGTAGAAGAACTGCTTTGCCCAAGCAGGGATTGCAGTTGCTTTAACCAGTTAGCCATATTTGCTC > 7:70351/1‑138 CTGTTAGTGCCAGGCGCATTAGGCGGACTGGCACTAACAGTTTGACCAATCCCTGATCCGCAGACGAGGAGGTAGAAGAACTGCTTTGCCCAAGCAGGGATTGCAGTTGAT < 3:107231/111‑1 CTGTTAGTGCCAGGCGCATTAGGCGGACTGGCACTAACAGTTTGACCAATCCCTGATCCGCAGACGAGGAGGTAGAAGAACTGCTTTGCCCAAGCAGGGATTGCAGTTGAT > 4:107231/1‑111 TGCCAGGCGCATTAGGCGGACTGGCACTAACAGTTTGACCAATCCCTGATCCGCAGACGAGGAGGTAGAAGAACTGCTTTGCCCAAGCAGGGATTGCAGTTGATTTAACCAGTTAGCCATATTTGCTCCTCAATAACCATTTTTAGTGC > 8:32677/1‑149 AAACTGTTAGTGCCAGGCGCATTAGGCGGACTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1929623‑1929589 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcACTAACAGTTTGACCAATCCCTGATCCGCAGACGAGGAGGTAGAAGAACTGCTTTGCCCAAGCAGGGATTGCAGTTGATTTAACCAGTTAGCCATATTTGCTCCTCAATAACCATTTTTAGTGC > NC_000913/1929613‑1929736 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |