| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,335,153 | Δ593 bp | [ymiA]–yciX | [ymiA], yciX | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1335153 | 1335745 | 593 | 22 [0] | [2] 26 | [ymiA]–yciX | [ymiA],yciX |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1335152 | 0 (0.000) | 22 (0.590) | 20/236 | 1.0 | 95.7% | coding (29/165 nt) | ymiA | uncharacterized protein |
| ? | NC_000913 | 1335746 = | 2 (0.050) | intergenic (+288/‑85) | yciX/acnA | uncharacterized protein/aconitate hydratase 1; aconitase A | |||||
TGGGCGCGTTTTCTCTGTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAG > NC_000913/1335606‑1335872 | aaaagattgaattattcactggagacgattcgtaaattcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTa > 5:15855‑M2/141‑149 (MQ=255) actggagacgattcgtaaattcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTAc > 3:176696‑M2/124‑133 (MQ=255) actggagacgattcgtaaattcgctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTAc < 4:176696‑M2/10‑1 (MQ=255) gctggatttttgactaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGaa > 6:137313‑M2/102‑146 (MQ=255) ctaaagtttctttaggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCg > 7:116474‑M2/89‑149 (MQ=255) ggttctttaggatttgtctcatcgtatgattaattacacaaatcgttcaacgtcttgctgataagtgattgcgattatatgagAAATCGTTACGCGATGTTTGTGATATCTTTAATATTCACCCTGAAGAGAATCAGATCTTCGCAAcc > 7:38841‑M2/84‑149 (MQ=255) taggatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCa < 6:15855‑M2/72‑1 (MQ=255) gatttgtgtcatcgtatgattaattactccaatcgttcaacgtgtttctgatatgtgatggcgattatatgagTAATCGTTACGCTATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCTGGGCTTCGCAACGCTGTCATTaa < 8:38841‑M2/76‑1 (MQ=255) gatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATc > 6:162828‑M2/74‑125 (MQ=255) gatttgtctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATc < 5:162828‑M2/52‑1 (MQ=255) tctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTaa > 8:19807‑M2/68‑143 (MQ=255) tctcatcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTaa < 7:19807‑M2/76‑1 (MQ=255) atcgtatgattaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCt < 8:116474‑M2/85‑1 (MQ=255) attaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATgtcgtc < 2:86083‑M2/93‑1 (MQ=255) attaattacaccaatcgttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATgtcgtc > 1:86083‑M2/56‑148 (MQ=255) cacaAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATg > 2:124534/1‑127 (MQ=255) cacaAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATg < 1:124534/127‑1 (MQ=255) ttcaacgtcttgctgataagtgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAg < 5:137313‑M2/111‑1 (MQ=255) tgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAg < 7:27876‑M2/107‑1 (MQ=255) tgatggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAg > 8:27876‑M2/19‑125 (MQ=255) ggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCaa < 6:69361‑M2/95‑1 (MQ=255) ggcgattatatgagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCaa > 5:69361‑M2/15‑109 (MQ=255) gagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAggagga > 7:115822‑M2/4‑85 (MQ=255) gagAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAggagga < 8:115822‑M2/82‑1 (MQ=255) aaaTCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAg < 5:34140/127‑1 (MQ=255) aaaTCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAg > 6:34140/1‑127 (MQ=255) | TGGGCGCGTTTTCTCTGTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAG > NC_000913/1335606‑1335872 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |