| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 2,819,278 | IS5 (+) +4 bp | intergenic (‑132/+100) | csrA ← / ← alaS | pleiotropic regulatory protein for carbon source metabolism/alanyl‑tRNA synthetase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2288919 = | NA (NA) | 46 (1.170) | 37/260 | 0.2 | 100% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 2819278 = | 0 (0.000) | intergenic (‑132/+103) | csrA/alaS | pleiotropic regulatory protein for carbon source metabolism/alanyl‑tRNA synthetase | |||||
| * | ? | NC_000913 | = 2290113 | NA (NA) | 70 (1.790) | 51/260 | 0.0 | 100% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 2819281 | 0 (0.000) | intergenic (‑135/+100) | csrA/alaS | pleiotropic regulatory protein for carbon source metabolism/alanyl‑tRNA synthetase | |||||
Only 100 of 117 total aligned reads displayed.
TCAGAATCAGCATTCTTTGCTCCTTGAAAGATTAAAAGAGTCGGGTCTCTCTGTATCCCGGCATTATCCATCATATAACGCCAAAAAGTAAGCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCTAACGCTGC > NC_000913/2819134‑2819428 | tCAGAATCAGCATTCTTTGCTCCTTGAAAGATTAAAAGAGTCGGGTCTCTCTGTATCCCGGCATTATCCATCATATAACGCCAAAAAGTAAGCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAg < 3:18928‑M2/149‑2 (MQ=255) tCAGCATTCTTTGCTCCTTGAAAGATTAAAAGAGTCGGGTCTCTCTGTATCCCGGCATTATCCATCATATAACGCCAAAAAGTAAGCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAggaaggt < 2:61306‑M2/149‑8 (MQ=255) tCAGCATTCTTTGCTCCTTGAAAGATTAAAAGAGTCGGGTCTCTCTGTATCCCGGCATTATCCATCATATAACGCCAAAAAGTAAGCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAggaaggt < 8:115003‑M2/149‑8 (MQ=255) aGCATTCTTTGCTCCTTGAAAGATTAAAAGAGTCGGGTCTCTCTGTATCCCGGCATTATCCATCATATAACGCCAAAAAGTAAGCAATGACAAACACATTACATCTAAGCAGTCATGGCGTTACATTCTGTTAAACCTAAggaaggtgc > 6:153434‑M2/1‑140 (MQ=255) aGCATTCTTTGCTCCTTGAAAGATTAAAAGAGTCGGGTCTCTCTGTATCCCGGCATTATCCATCATATAACGCCAAAAAGTAAGCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAggaaggtgc > 1:127234‑M2/1‑140 (MQ=255) aGCATTCTTTGCTCCTTGAAAGATTAAAAGAGTCGGGTCTCTCTGTATCCCGGCATTATCCATCATATAACGCCAAAAAGTAAGCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAggaaggtgc > 2:39333‑M2/1‑140 (MQ=255) ttCTTTGCTCCTTGAAAGATTAAAAGAGTCGGGTCTCTCTGTATCCCGGCATTATCCATCATATAACGCCAAAAAGTAAGCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaa < 7:108579‑M2/148‑13 (MQ=255) cttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTTAGCCGa < 6:79769‑M2/14‑1 (MQ=255) cttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTTAGCCGa > 5:79769‑M2/131‑144 (MQ=255) aaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagcagagaagaatttccccgcttattcgcaccttccCTAAGTTTAGCCGATATacac > 5:152920‑M2/128‑148 (MQ=255) ttGAAAGATTAAAAGAGTCGGGTCTCTCTGTATCCCGGCATTATCCATCATATAACGCCAAAAAGTAAGCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaacaagtccctga < 7:118054‑M2/148‑24 (MQ=255) gaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTTAGCCGATATACACAACTTCaa > 8:72910‑M2/121‑149 (MQ=255) gAAAGATTAAAAGAGTCGGGTCTCTCTGTATCCCGGCATTATCCATCATATAACGCCAAAAAGTAAGCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaacaagtccctgat > 4:75709‑M2/1‑123 (MQ=255) aaGATTAAAAGAGTCGGGTCTCTCTGTATCCCGGCATTATCCATCATATAACGCCAAAAAGTAAGCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaacaagtccctgatatga > 7:115003‑M2/1‑121 (MQ=255) ttAAAAGAGTCGGGTCTCTCTGTATCCCGGCATTATCCATCATATAACGCCAAAAAGTAAGCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaacaagtccctgatatgagatc > 8:108579‑M2/1‑117 (MQ=255) aaaaGAGTCGGGTCTCTCTGTATCCCGGCATTATCCATCATATAACGCCAAAAAGTAAGCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaacaagtccctgatatgagatcat < 2:85388‑M2/149‑35 (MQ=255) taaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATc > 4:161346‑M2/109‑149 (MQ=255) gagTCGGGTCTCTCTGTATCCCGGCATTATCCATCATATAACGCCAAAAAGTAAGCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaacaagtccctgatatgagatcatgttt > 1:85388‑M2/1‑111 (MQ=255) tCGGGTCTCTCTGTATCCCGGCATTATCCATCATATAACGCCAAAAAGTAAGCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtc > 4:18928‑M2/1‑108 (MQ=255) tCGGGTCTCTCTGTATCCCGGCATTATCCATCATATAACGCCAAAAAGTAAGCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaacaa > 5:135063‑M2/1‑108 (MQ=255) tCGGGTCTCTCTGTATCCCGGCATTATCCATCATATAACGCCAAAAAGTAAGCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaacaa < 6:135063‑M2/123‑16 (MQ=255) aggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGt > 1:7870‑M2/104‑149 (MQ=255) gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGt < 2:156525‑M2/46‑1 (MQ=255) gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGt > 1:156525‑M2/102‑147 (MQ=255) gTCTCTCTGTATCCCGGCATTATCCATCATATAACGCCAAAAAGTAAGCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtt < 5:53596‑M2/141‑38 (MQ=255) gTCTCTCTGTATCCCGGCATTATCCATCATATAACGCCAAAAAGTAAGCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtt > 6:56284‑M2/1‑104 (MQ=255) gTCTCTCTGTATCCCGGCATTATCCATCATATAACGCCAAAAAGTAAGCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtt > 6:53596‑M2/1‑104 (MQ=255) tcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTTAGCCGATATACACAACTTCAACCt > 2:175724‑M2/96‑127 (MQ=255) tcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTTAGCCGATATACACAACTTCAACCt < 1:175724‑M2/32‑1 (MQ=255) tGTATCCCGGCATTATCCATCATATAACGCCAAAAAGTAAGCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaacaagtccctgatatgag > 7:61293‑M2/1‑97 (MQ=255) tGTATCCCGGCATTATCCATCATATAACGCCAAAAAGTAAGCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaacaagtccctgatatgag < 8:61293‑M2/126‑30 (MQ=255) gcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAAt < 6:129885‑M2/59‑1 (MQ=255) cGGCATTATCCATCATATAACGCCAAAAAGTAAGCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaaca > 1:180739‑M2/1‑90 (MQ=255) cgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAAt < 3:111591‑M2/65‑1 (MQ=255) ggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAAt > 3:117772‑M2/82‑146 (MQ=255) ggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAAt < 4:117772‑M2/65‑1 (MQ=255) gagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCg > 7:25879‑M2/81‑149 (MQ=255) gagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCg < 8:25879‑M2/69‑1 (MQ=255) tCCATCATATAACGCCAAAAAGTAAGCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcat > 8:118054‑M2/1‑82 (MQ=255) aaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGaa < 1:189350‑M2/73‑1 (MQ=255) atcatATAACGCCAAAAAGTAAGCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcat > 1:61306‑M2/1‑79 (MQ=255) aatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCg > 2:87976‑M2/74‑127 (MQ=255) aatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCg < 1:87976‑M2/54‑1 (MQ=255) aaCGCCAAAAAGTAAGCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaacaagtccctga > 3:83453‑M2/1‑72 (MQ=255) aaCGCCAAAAAGTAAGCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaacaagtccctga < 4:83453‑M2/95‑24 (MQ=255) gCCAAAAAGTAAGCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttca > 3:72423‑M2/1‑69 (MQ=255) gCCAAAAAGTAAGCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttca < 4:72423‑M2/135‑67 (MQ=255) tgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATa < 5:164334‑M2/51‑1 (MQ=255) tgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATa > 6:164334‑M2/60‑110 (MQ=255) aGTAAGCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg > 7:121250‑M2/1‑62 (MQ=255) gaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTTAGCCGATATACACAACTTCAACCTGACtt < 6:55106‑M2/37‑1 (MQ=255) gaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTTAGCCGATATACACAACTTCAACCTGACtt > 5:55106‑M2/56‑92 (MQ=255) gaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCt > 1:175992‑M2/56‑148 (MQ=255) aaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGa < 2:175992‑M2/95‑1 (MQ=255) gCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatca > 4:75690‑M2/1‑57 (MQ=255) gCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatca < 3:75690‑M2/126‑70 (MQ=255) gCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaacaagtccctgatatgagatcatgt > 2:104921‑M2/1‑57 (MQ=255) gCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaacaagtccctgatatgagatcatgt < 1:104921‑M2/93‑37 (MQ=255) atgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGaa > 2:25410‑M2/53‑125 (MQ=255) atgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGaa < 1:25410‑M2/73‑1 (MQ=255) atgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGc < 6:39008‑M2/91‑1 (MQ=255) atgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGc > 5:39008‑M2/53‑143 (MQ=255) aaTGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgga > 1:105984‑M2/1‑55 (MQ=255) gACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacag < 3:31223‑M2/149‑98 (MQ=255) cAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaacaagtccctgat < 7:8880‑M2/74‑25 (MQ=255) cAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaacaagtccctgat > 8:8880‑M2/1‑50 (MQ=255) aTTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcag > 5:59279‑M2/1‑43 (MQ=255) aTTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcag > 4:31223‑M2/1‑43 (MQ=255) tCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaac < 7:4477‑M2/95‑59 (MQ=255) gagaagaatttccccgcttattcgcaccttccCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGtt > 1:71077‑M2/33‑88 (MQ=255) gagaagaatttccccgcttattcgcaccttccCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGtt < 2:71077‑M2/56‑1 (MQ=255) gagaagaatttccccgcttattcgcaccttccCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTcg > 2:134092‑M2/33‑149 (MQ=255) agaagaatttccccgcttattcgcaccttccCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTcgc > 8:16278‑M2/32‑149 (MQ=255) aaGCAGTCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcg < 5:115395‑M2/149‑116 (MQ=255) agaatttccccgcttattcgcaccttccCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCt > 7:94014‑M2/29‑149 (MQ=255) aGTCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgac > 3:140172‑M2/1‑30 (MQ=255) aGTCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggatcatcatgagtcatcaacttaccttcgccgac < 4:140172‑M2/125‑96 (MQ=255) gTCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaacaagtccctgat > 5:107588‑M2/1‑29 (MQ=255) gTCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaacaagtccctgat < 6:107588‑M2/53‑25 (MQ=255) tCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtca > 6:67333‑M2/1‑28 (MQ=255) tCATGGCATTACATTCTGTTAAACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgt < 2:62152‑M2/147‑120 (MQ=255) gcttattcgcaccttccCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCtt < 8:94014‑M2/132‑1 (MQ=255) cttattcgcaccttccCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCttt < 7:16278‑M2/133‑1 (MQ=255) aTTCTGTTAAACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaa < 1:122572‑M2/147‑132 (MQ=255) tCTGTTAAACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgc > 8:14659‑M2/1‑14 (MQ=255) tGTTAAACCTAAggaaggtgcgcacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatt < 3:123792‑M2/149‑138 (MQ=255) gTTAAACCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattt < 7:57425‑M2/149‑139 (MQ=255) cttccCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATg > 8:158392‑M2/6‑65 (MQ=255) cttccCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATg < 7:158392‑M2/60‑1 (MQ=255) cttccCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCt > 2:14223‑M2/6‑148 (MQ=255) aaaCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttc > 2:158085‑M2/1‑8 (MQ=255) aaCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttctt > 8:57425‑M2/1‑7 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtc > 1:108588‑M2/1‑4 (MQ=255) tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcc < 5:99406‑M2/149‑147 (MQ=255) aagtaaggtgagaacaagtcccagatatgagatcatgtttgtcatcttgagccatagaacacggttcatcatgagtcatcaacttaccttctccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcc > 8:127585‑M2/1‑2 (MQ=255) aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactt < 7:96451‑M2/84‑84 (MQ=255) aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggggtcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtccc > 3:5256‑M2/1‑1 (MQ=255) aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagg > 8:131963‑M2/1‑1 (MQ=255) aggaaggagcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttctt > 2:186766‑M2/1‑1 (MQ=255) aggaaggagcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttctt < 1:186766‑M2/143‑143 (MQ=255) | TCAGAATCAGCATTCTTTGCTCCTTGAAAGATTAAAAGAGTCGGGTCTCTCTGTATCCCGGCATTATCCATCATATAACGCCAAAAAGTAAGCAATGACAAACACATTACATCTAAGCAGTCATGGCATTACATTCTGTTAAACCTAAGTTTAGCCGATATACACAACTTCAACCTGACTTTATCGTTGTCGATAGCGTTAATGCGAATGCCGTGAAGCGAGTCCACGGCATTGCCTGACGCTTATATTATTGCAATTTCGCGCTGACCCAGCCTTTCACACTGGCTAACGCTGC > NC_000913/2819134‑2819428 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |