New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 601044	56 (0.620)	3 (0.040)	3/226	NT	5.2%	coding (2331/3144 nt)	cusA	copper/silver efflux system, membrane component
	?	NC_000913	= 601061	57 (0.680)					coding (2348/3144 nt)	cusA	copper/silver efflux system, membrane component

TAACCGTGAAAAAGCCGCACGTTACGGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAACCGAGAATGCGCGCCCGACGAGCTGGATTTATA  >  NC_000913/600897‑601189                                                                                                                                                    |                                                                                                                                                  tAACCGTGAAAAAGCCGCACGTTACGGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGC                                                                                                                                                   >  1:247946‑M1/1‑148 (MQ=255)    ccGTGATAAAGCCGCACGTTACGTTATGACGTTGGCGGATGTGCAGTTGTTTGTGAGTTCTGTGGTGGGCGGGGCTATGGTTAGCGAAACGGTGGTAGGGATTGCCCGTTATCCAATTAATCTGATTTATCCGCAAAGCTGGCGGGAt                                                                                                                                                <  8:260173/148‑1 (MQ=255)    ccGTGAAAAAGCCGCACGTTACGGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGAt                                                                                                                                                <  5:327962/148‑1 (MQ=255)     cGTGAAAAAGCCGCACGTTACGGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGAt                                                                                                                                                <  1:352131/147‑1 (MQ=255)      gTGAAAAAGCCGCACGTTACGGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAg                                                                                                                                              >  8:213982/1‑148 (MQ=255)       tGAAAAAGCCGCACGTTAACGTATGACGGTGGCGGATGAGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACCGTGGAAGGGAATGCACGTTATCCAATTAATCTGCGTTATACGCAAAGCTGGCGCGATAGt                                                                                                                                             >  6:303284/1‑148 (MQ=255)                            tATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTg                                                                                                                        <  2:379790/148‑1 (MQ=255)                                              gCAGTTGATTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACTTTGGAAGCGATTGCCAGTTATACAATTAATCTGCGTTATCCGCAAAGCTGGCGCagtgcctgcggactatcgcgccagctttgcg                                                                                                                    <  4:148088‑M1/134‑32 (MQ=255)                                               cAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCagtgcctgcggactatcgagacagatttgcgg                                                                                                                   >  3:148088‑M1/1‑102 (MQ=255)                                                aGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATg                                                                                                      >  7:185071/1‑146 (MQ=255)                                                  ttgtttgtGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGc                                                                                                                                         <  5:308550/109‑1 (MQ=255)                                                  ttgtttgtGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGc                                                                                                                                         >  6:308550/1‑109 (MQ=255)                                                   tgtttgtGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGAt                                                                                                                                                <  4:334848/101‑1 (MQ=255)                                                   tgtttgtGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGAt                                                                                                                                                >  3:334848/1‑101 (MQ=255)                                                     tttgtGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGTAAGGGATTGCCCGTTATACAATTAATCTGAGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGAGCCTGACGCCGATGAagcag                                                                                                >  2:326935/1‑147 (MQ=255)                                                         tgACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAagcag                                                                                                >  1:60588/1‑143 (MQ=255)                                                         tgACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAagcag                                                                                                <  2:60588/143‑1 (MQ=255)                                                           aCTTCTGCGGTGGGCGGGGCGATGGTTGGCGAATCGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCAGT‑GCCTGCGGACTATcgcgccagctttgcggataacgcagattaattggataacgg                                                                                         >  4:46167‑M2/1‑106 (MQ=255)                                                            cTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGc                                                                                                                                         >  2:301838/1‑99 (MQ=255)                                                            cTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGc                                                                                                                                         <  1:301838/99‑1 (MQ=255)                                                            cTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCAc                                                                                        <  7:213982/148‑1 (MQ=255)                                                                 gCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCAGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTgg                                                                                   >  4:321738/1‑148 (MQ=255)                                                                  cGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTg                                                                                    <  7:215275/146‑1 (MQ=255)                                                                           gggcgATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCATGCCGCCGATGAAGCAGCAAATCACCCTGGCCGCCGTGGc                                                                         >  4:254659/1‑148 (MQ=255)                                                                            ggcgATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGcc                                                                        <  3:321738/148‑1 (MQ=255)                                                                                   gTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACAtt                                                                  >  1:106747/1‑147 (MQ=255)                                                                                    ttGGCGTAACGGTTGAAGGGATTGCCCGTTTTCCAATTAATCTGCGTTTTCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTaa                                                                <  8:185071/148‑1 (MQ=255)                                                                                    ttGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTaa                                                                <  2:106747/148‑1 (MQ=255)                                                                                    tgggggAATCGGTGTTAGGGATTGCCCTTTATCCAATTAATCTTCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGAGCCTGACGCCGATGTAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTaa                                                                <  5:303284/143‑1 (MQ=255)                                                                                          aaaCGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTg                                                                                                               <  6:398513/95‑1 (MQ=255)                                                                                          aaaCGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTg                                                                                                               >  5:398513/1‑95 (MQ=255)                                                                                          aaaCGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCAcc                                                                                       >  2:370477/1‑119 (MQ=255)                                                                                          aaaCGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCAcc                                                                                       <  1:370477/119‑1 (MQ=255)                                                                                           aaCGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTctct                                                         <  2:247946/148‑1 (MQ=255)                                                                                                            cccGTTATACAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCCCTGCGCCAGCGGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGGCGATGCt                                        <  1:326935/148‑1 (MQ=255)                                                                                                             ccGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCgatagtccgcaggcactgcgccagctttgcggataacgcagattaattggataacgggcaatcccttccaccgattcgccaaccatcgccccgcccaccgcagaagt                                        >  4:46167‑M1/1‑40 (MQ=255)                                                                                                             ccGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTaa                                                                <  8:280447/123‑1 (MQ=255)                                                                                                             ccGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTaa                                                                >  7:280447/1‑123 (MQ=255)                                                                                                             ccGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCt                                        >  1:142116/1‑147 (MQ=255)                                                                                                              cGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCCGGCACTGCGCCAGCTGCCGATCCTGCCGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTg                                       >  1:81031/1‑147 (MQ=255)                                                                                                                ttATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCGGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGaa                                     >  7:237533/1‑147 (MQ=255)                                                                                                                 tATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCg                                                                                                         <  2:315055/78‑1 (MQ=255)                                                                                                                 tATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCg                                                                                                         >  1:315055/1‑78 (MQ=255)                                                                                                                  aTCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACa                                                                    <  7:209072/114‑1 (MQ=255)                                                                                                                  aTCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACa                                                                    >  8:209072/1‑114 (MQ=255)                                                                                                                    ccAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAAcc                                 >  7:224493/1‑147 (MQ=255)                                                                                                                      aaTTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTa                                                        >  1:387670/1‑122 (MQ=255)                                                                                                                      aaTTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTa                                                        <  2:387670/122‑1 (MQ=255)                                                                                                                       aTTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAgcagca                                                                                              <  4:211342/83‑1 (MQ=255)                                                                                                                       aTTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAgcagca                                                                                              >  3:211342/1‑83 (MQ=255)                                                                                                                       aTTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAg                                                                                >  8:370613/1‑97 (MQ=255)                                                                                                                       aTTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAg                                                                                <  7:370613/97‑1 (MQ=255)                                                                                                                       aTTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAACCgag                              >  2:124621/1‑147 (MQ=255)                                                                                                                       aTTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAACCgag                              >  2:211043/1‑147 (MQ=255)                                                                                                                        ttAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAACCgaga                             >  5:191190/1‑147 (MQ=255)                                                                                                                        ttAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAACCgaga                             >  4:369863/1‑147 (MQ=255)                                                                                                                        ttAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAACCgaga                             <  6:191190/147‑1 (MQ=255)                                                                                                                         tAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAACCGAGAAt                           >  3:20333/1‑148 (MQ=255)                                                                                                                             cTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAACCGAGAATgcgc                       >  3:117749/1‑148 (MQ=255)                                                                                                                             cTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAACCGAGAATgcgc                       >  4:66974/1‑148 (MQ=255)                                                                                                                               gCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAACCGAGAATgcgcgc                     >  1:373278/1‑148 (MQ=255)                                                                                                                                cGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAACCGAGAATgcgcgc                     <  1:124621/147‑1 (MQ=255)                                                                                                                                cGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAACCGAGAATGCGCGcc                    >  1:106998/1‑148 (MQ=255)                                                                                                                                   tATCCGCAAAGCTGGCGCGATAGTCCGCAGGCCCTGCGCCAGCTGCCGCTCCTGCCGCCGATGAAGCAGCAAGTCACCCGGGCAGCCGGGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAACACCGAGAATGCGCGCCcgc                 >  1:320947/1‑147 (MQ=255)                                                                                                                                     tCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAACCGAGAATGCGCGCCcgac                <  3:133338/147‑1 (MQ=255)                                                                                                                                      ccGCAAATCTGTCTCGATAGTCCGCAGGCACTgcgccagctttgcggataacgcagattaattggataacgggcaatcccttccaccgtttcgccaaccatcgccccgcccaccgcagaagtcacaaacaactg                            >  3:148088‑M2/1‑32 (MQ=255)                                                                                                                                       cGCAAAGCTGGCGCGATAGTCCGCAGGCACTgcgccagctttgcggataacgcagattaattgtataactggcaatcgcttccaaagtttcgccaaccatcgccccgcccaccgcagaagtcacaatcaactgc                           <  4:148088‑M2/134‑104 (MQ=255)                                                                                                                                         cAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAACCGAGAATGCGCGCCCGACGAGCt           <  4:20333/148‑1 (MQ=255)                                                                                                                                             gCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAACCGAGAATGCGCGCCCGACGAGCTGGAt       <  2:142116/148‑1 (MQ=255)                                                                                                                                                  cgcgATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAACCGAGAATGCGCGCCCGACGAGCTGGATTtata  >  1:201967/1‑148 (MQ=255)                                                                                                                                                    |                                                                                                                                                  TAACCGTGAAAAAGCCGCACGTTACGGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAACCGAGAATGCGCGCCCGACGAGCTGGATTTATA  >  NC_000913/600897‑601189

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.