BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4384359 =	89 (0.980)	4 (0.050)	4/236	NT	4.8%	coding (521/1503 nt)	yjeM	putative transporter
*	?	NC_000913	4384374 =	72 (0.820)	4 (0.050)	4/236	NT	4.8%	coding (536/1503 nt)	yjeM	putative transporter
Rejected: Frequency below/above cutoff threshold.

Only 100 of 105 total aligned reads displayed.

GCCGGACTGGAGCCTACGCAGGTGGTTGGTCTGCTGGCTGTGGCATGGATGATTCTGGTCACCGTCGTTGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCGGGTTATCAGTCCGGTCTGGCAATGCTATCGTTTGTGGTATTTGCCATTTTTGCCTATGGCGGAA  >  NC_000913/4384214‑4384505

gCCGGACTGGAGCCTACGCTGGTGGGTTGTCTGCTGGCTGTGGCATGGATGATTCTGGTCAGCGTCGTTGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTg                                                                                                                                                   <  6:375860/147‑1 (MQ=255)

gCCGGACTGGAGCCTACGCAGGTGGTTGGTCTGCTGGCTGTGGCATGGATGATTCTGGTCACCGTCGTTGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGc                                                                                                                                                  >  5:197207/1‑148 (MQ=255)

ccaaccgcttcaattccgccataggcaaaaatggcaaataccacaaacgatagcattgccagaccggactgataacccgggttcggtgatgcaaggaaattaatatcctgcgcgaaatgcccaccatttaataacaaaatagtaaTGc                                                                                                                                                  <  2:361049‑M1/3‑1 (MQ=255)

 ccGGACTGGAGCCTACGCAGGTGGTTTGTCTGCTGGCTGTGGCATGGATGATTCTGGTCACCGTCGTTGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCt                                                                                                                                                 <  7:134717/148‑1 (MQ=255)

  cGGACTGGAGCCTACGCAGGTGGTTGTGCTGCTGGCTGTGGCATGGATGATTCTGGTCACCGTGGTTGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGGCTGAATTTAGTATTGCTg                                                                                                                                                <  4:326482/148‑1 (MQ=255)

  aaccgcttcaattccgccataggcaaaaatggcaaataccacaaacgatagcattgccagaccggactgataacccgggttcggtgatgcaaggaaattaatatcctgcgcgaaatgcccaccatttaataacaaaatagtaaTGCt                                                                                                                                                 <  3:104638‑M1/4‑1 (MQ=255)

  aaccgcttcaattccgccataggcaaaaatggcaaataccacaaacgatagcattgccagaccggactgataacccgggttcggtgatgcaaggaaattaatatcctgcgcgaaatgcccaccatttaataacaaaatagtaaTGCt                                                                                                                                                 <  6:56246‑M1/4‑1 (MQ=255)

  aaccgcttcaattccgccataggcaaaaatggcaaataccacaaacgatagcattgccagaccggactgataacccgggttcggtgatgcaaggaaattaatatcctgcgcgaaatgcccaccatttaataacaaaatagtaaTGCt                                                                                                                                                 <  3:177752‑M1/4‑1 (MQ=255)

    gACTGGAGCCTACGCAGGTGGTTGGTCTGCTGGCTGTGTCATGGATGATTCTGGTCACCGTCGTTGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGGCTGAATTTAGTATTGCTGtt                                                                                                                                              <  5:114830/148‑1 (MQ=255)

    gACTGGAGCCTACGCAGGTGGTTGGTCTGCTGGCTGTGGCATGGATGATTCTGGTCACCGTCGTTGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGtt                                                                                                                                              <  7:11762/148‑1 (MQ=255)

    gACTGGAGCCTACGCAGGTGGTTGGTCTGCTGGCTGTGGCATGGATGATTCTGGTCACCGTCGTTGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGtt                                                                                                                                              <  7:340958/148‑1 (MQ=255)

      cTGGAGCCTACGCAGGTGGTTGGTCTGCTGGCTGTGGCATGGATGATTCTGGTCACCGTCGTTGGTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAg                                                                                                                                            >  6:59176/1‑148 (MQ=255)

      cTGGAGCCTACGCAGGTGGTTGGTCTGCTGGCTGTGGCATGGATGATTCTGGTCACCGTCGTTGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAg                                                                                                                                            <  7:377914/148‑1 (MQ=255)

         gAGCCTATGCAGGTGGTTGGTCTGCTGGCTGTGGCATGGATGATTCTGGTCACCGTCGTTGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTaa                                                                                                                                         <  7:138081/148‑1 (MQ=255)

         gAGCCTACGCAGGTGGTTGGTCTGCTGGCTGTGGCATGGATGATTCTGGTCACCGTCGTTGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTaa                                                                                                                                         <  1:343580/148‑1 (MQ=255)

         gAGCCTACGCAGGTGGTTGGTCTGCTGGCTGTGGCATGGATGATTCTGGTCACCGTCGTTGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTa                                                                                                                                          <  6:277366/147‑1 (MQ=255)

             ttccgccataggcaaaaatggcaaataccacaaacgatagcattgccagaccggactgataacccgggttcggtgatgcaaggaaattaatatcctgcgcgaaatgcccaccatttaataacaaaatagtaaTg                                                                                                                                                   <  7:330506‑M1/2‑1 (MQ=255)

             ttccgccataggcaaaaatggcaaataccacaaacgatagcattgccagaccggactgataacccgggttcggtgatgcaaggaaattaatatcctgcgcgaaatgcccaccatttaataacaaaatagtaaTg                                                                                                                                                   >  8:330506‑M1/133‑134 (MQ=255)

                cGCAGGTGGTTGGTCTGCTGGCTGTGGCATGGATGATTCTGGTCACCGTCGTTGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCAtt                                                                                                                                    <  8:124835/146‑1 (MQ=255)

                 gCAGGTGGTTGGTCTGCTGGCTGTGGCATGGATGATTCTGGTCACCGTCGTTGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACt                                                                                                                                 <  6:152372/148‑1 (MQ=255)

                    ggtggtTGGTCTGCTGGCTGTGGCATGGATGATTCTGGTCACCGTCGTTGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTAtt                                                                                                                              <  4:194152/148‑1 (MQ=255)

                        gttggtCTGCTGGCTGTGGCATGGATGATTCTGGTCACCGTCGTTGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTg                                                                                                                           <  2:220070/147‑1 (MQ=255)

                         ttggtCTGCTGGCTGTGGCATGGATGATTCTGGTCACCGTCGTTGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGt                                                                                                                          >  6:13032/1‑147 (MQ=255)

                             tCTGCTGGCTGTGGCATGGATGATTCTGGTCACCGTCGTTGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTAc                                                                                                                                  <  8:36710/135‑1 (MQ=255)

                             tCTGCTGGCTGTGGCATGGATGATTCTGGTCACCGTCGTTGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTAc                                                                                                                                  >  7:36710/1‑135 (MQ=255)

                                gctggctgTGGCATGGATGATTCTGGTCACCGTCGTTGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAAt                                                                                                                  >  1:361049/1‑148 (MQ=255)

                                 ctggctgTTGCATGGATGATTCTGGTCACCGTCGTTGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGGATTACTATTTTGTTATTAAAtg                                                                                                                 <  8:241437/148‑1 (MQ=255)

                                        tgGCATGGATGATTCTGGTCACCGTCGTTGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCa                                                                                                          >  1:331920/1‑148 (MQ=255)

                                              ggATGATTCTGGTCACCGTCGTTGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGtt                                                                                                                         <  7:416429/127‑1 (MQ=255)

                                              ggATGATTCTGGTCACCGTCGTTGCTTCTAAGGGGATTAATAAAATTGCCAGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGtt                                                                                                                         >  8:416429/1‑127 (MQ=255)

                                                atgatTCTGGTCACCGTCGTTGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTcgcg                                                                                                   >  3:405209/1‑147 (MQ=255)

                                                     tCTGGTCACCGTCGTTGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATCTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGa                                                                                              >  8:145103/1‑147 (MQ=255)

                                                        ggTCACCGTCGTTGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGTTGGGCATTTCGCGCAGGatat                                                                                           >  7:316371/1‑147 (MQ=255)

                                                        ggTCACCGTCGTTGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGatat                                                                                           >  1:133935/1‑147 (MQ=255)

                                                             ccGTCGTTGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTAtttt                                                                                                                            <  5:358390/109‑1 (MQ=255)

                                                             ccGTCGTTGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTAtttt                                                                                                                            >  6:358390/1‑109 (MQ=255)

                                                             ccGTCGTTGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCTCAGGATATTAAttt                                                                                     >  5:337885/1‑148 (MQ=255)

                                                              cgtcgtTGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGt                                                                                                                                           >  1:40930/1‑93 (MQ=255)

                                                              cgtcgtTGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGt                                                                                                                                           <  2:40930/93‑1 (MQ=255)

                                                               gtcgtTGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTTTTGCAGGAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTcc                                                                                   <  1:27271/148‑1 (MQ=255)

                                                                tcgtTGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCt                                                                                  >  1:329427/1‑148 (MQ=255)

                                                                tcgtTGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCt                                                                                  <  5:13032/148‑1 (MQ=255)

                                                                tcgtAGCTTCTAAGGGGTTTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGAGCAGGATATTAATTTCCt                                                                                  >  6:305468/1‑148 (MQ=255)

                                                                 cgtTGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAAtggtgg                                                                                                             <  7:375990/120‑1 (MQ=255)

                                                                 cgtTGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAAtggtgg                                                                                                             >  8:375990/1‑120 (MQ=255)

                                                                   ttGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCAGTTCGCGCAGGATATTAATTTCCTTg                                                                                >  6:338796/1‑147 (MQ=255)

                                                                      gataacccgggttcggtgatgcaaggaaattaatatcctgcgcgaaatgcccaccatttaataacaaaatagtaaTGCTGTTAGTAAGCATTACTATTTTGtt                                                                                                                         <  3:389345‑M1/28‑1 (MQ=255)

                                                                      gataacccgggttcggtgatgcaaggaaattaatatcctgcgcgaaatgcccaccatttaataacaaaatagtaaTGCTGTTAGTAAGCATTACTATTTTGtt                                                                                                                         >  4:389345‑M1/76‑103 (MQ=255)

                                                                      cTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTAttt                                                                                                                             <  5:36699/99‑1 (MQ=255)

                                                                      cTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTAttt                                                                                                                             >  6:36699/1‑99 (MQ=255)

                                                                           aaGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCAtt                                                                                                                                    >  4:195239/1‑87 (MQ=255)

                                                                           aaGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCAtt                                                                                                                                    <  3:195239/87‑1 (MQ=255)

                                                                           aaGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCa                                                                           <  4:377576/144‑1 (MQ=255)

                                                                           aaGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCa                                                                           >  3:377576/1‑144 (MQ=255)

                                                                           aaGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCg                                                                        >  5:154437/1‑147 (MQ=255)

                                                                            aGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCAtt                                                                                                        <  1:368967/114‑1 (MQ=255)

                                                                            aGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCAtt                                                                                                        >  2:368967/1‑114 (MQ=255)

                                                                             ggggATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAAc                                                                     >  5:253320/1‑148 (MQ=255)

                                                                               ggATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAAtgg                                                                                                                >  2:163583/1‑103 (MQ=255)

                                                                               ggATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAAtgg                                                                                                                <  1:163583/103‑1 (MQ=255)

                                                                                gATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCg                                                                  <  7:417484/148‑1 (MQ=255)

                                                                                 aTTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCgg                                                                 <  8:187442/148‑1 (MQ=255)

                                                                                   taataaAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCGGGt                                                               >  3:317221/1‑148 (MQ=255)

                                                                                    aataaAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAAtg                                                                                                                 >  7:434749/1‑97 (MQ=255)

                                                                                     ataaAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCGGGtt                                                              <  4:405209/147‑1 (MQ=255)

                                                                                      taaAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCGGGTTAt                                                            >  1:329464/1‑148 (MQ=255)

                                                                                        aaaTTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCGGGTTATc                                                           <  7:83166/147‑1 (MQ=255)

                                                                                        aaaTTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCGGGTTATc                                                           <  6:197207/147‑1 (MQ=255)

                                                                                         aaTTGCCCGCACTACTGCGGTGGGCGGGATTCCACTACTGTGTCTGAAGTTAGTACTGCTGTTAGACAGCATTACAATTATCCTATTAAATGGTGGGCAATGCCCGCACGATATTAACATCCTTGCATCACCGAACCCGGGTTATCAg                                                         <  6:253320/148‑1 (MQ=255)

                                                                                           ttGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCAtt                                                                                                                                    <  2:93011/71‑1 (MQ=255)

                                                                                           ttGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCAtt                                                                                                                                    >  1:93011/1‑71 (MQ=255)

                                                                                           ttGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCAtt                                                                                                                                    >  1:99009/1‑71 (MQ=255)

                                                                                           ttGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCAtt                                                                                                                                    <  2:99009/71‑1 (MQ=255)

                                                                                             aggaaattaatatcctgcgcgaaatgcccaccatttaataacaaaatagtaaTGCTTACTAACAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCg                                                                  >  2:123721‑M1/53‑135 (MQ=255)

                                                                                             aggaaattaatatcctgcgcgaaatgcccaccatttaataacaaaatagtaaTGCTTACTAACAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCg                                                                  <  1:123721‑M1/83‑1 (MQ=255)

                                                                                                     tACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCGGGTTATCAGTCCGGTCTGGc                                              >  6:274359/1‑147 (MQ=255)

                                                                                                         gCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCGGGTTATCAGTCCGGTCTGGCAATGc                                         >  1:363379/1‑148 (MQ=255)

                                                                                                         gCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTCTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCGCGTTATCAGTCAGGTCTGTCAATGc                                         >  4:104638/1‑148 (MQ=255)

                                                                                                           ggTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCGGGTTATCAGTCCGGTCTGGCaaatac                                        >  6:95046/1‑143 (MQ=255)

                                                                                                            gTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCGGGTTATCAGTCCGGTCTGGCAATGCTAt                                      <  2:363379/148‑1 (MQ=255)

                                                                                                            gTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCGGGTTATCAGTCCGGTCTGGCAATGCTAt                                      <  2:329464/148‑1 (MQ=255)

                                                                                                                   gTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCGGGTTATCAGTCCGGTCTGGCAATGCTATCGTTtgt                               <  5:274359/148‑1 (MQ=255)

                                                                                                                   gTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCGGGTTATCAGTCCGGTCTGGCAATGCTATCGTTtgt                               <  5:338796/148‑1 (MQ=255)

                                                                                                                   gTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCGGGTTATCAGTCCGGTCTGGCAATGCTATCGTTtgt                               <  2:331920/148‑1 (MQ=255)

                                                                                                                       tGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAAccc                                                                   >  6:202088/1‑108 (MQ=255)

                                                                                                                       tGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGCGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAAccc                                                                   <  5:202088/108‑1 (MQ=255)

                                                                                                                        gCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCGGGTTATCAGTCCGGTCTGGCa                                             >  7:149598/1‑129 (MQ=255)

                                                                                                                        gCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCGGGTTATCAGTCCGGTCTGGCa                                             <  8:149598/129‑1 (MQ=255)

                                                                                                                         cAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCTAACCCGGGTTATCAGTCCGGTCTGGCAATGCt                                        <  3:123861/133‑1 (MQ=255)

                                                                                                                             aaTGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCGGGTTATCAGTCCGGt                                                   <  2:339626/118‑1 (MQ=255)

                                                                                                                             aaTGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCGGGTTATCAGTCCGGt                                                   >  1:339626/1‑118 (MQ=255)

                                                                                                                              aTGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCGGGTTATCAGTCCGGTCTGGCAATGCTATCGTTTGTGGTATTTGCCa                    <  6:154437/148‑1 (MQ=255)

                                                                                                                               tgtgTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCGGGTTATCAGTCCGGTCTGGCAATGCTATCGGTTGTGGTATTTGCGAt                   >  6:222867/1‑148 (MQ=255)

                                                                                                                                    cTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCGGGTTATCAGTCCGGTCTGGCAATGCTATCGTTTGTGGTATTTGCCATTTTTg              <  2:133935/148‑1 (MQ=255)

                                                                                                                                      gAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCGGGTTATCAGTCCGGTCTGGCAATGCTATCGTTTGTGGTATTTg                       >  2:401048/1‑137 (MQ=255)

                                                                                                                                      gAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCGGGTTATCAGTCCGGTCTGGCAATGCTATCGTTTGTGGTATTTg                       <  1:401048/137‑1 (MQ=255)

                                                                                                                                      gAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATGTCCTTGCATCACCGAACCCGGGTTATCAGTCCGGTCTGTCAATGCTATCGTTTGTGGTATTTGCCATTTTTGc             >  3:6133/1‑147 (MQ=255)

                                                                                                                                       aaTTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCGGGTTATCAGTCCGGTCTGGCAATGCTATCGTTTGTGGTATTTGCCATTTTTgac            >  5:288394/1‑145 (MQ=255)

                                                                                                                                        aTTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTAGTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCGGGTTATCAGTCCGGTCTGGCAATGCTATCGTTTGTGGTATTTGCCATTTTTGccaa          >  5:48081/1‑146 (MQ=255)

                                                                                                                                                ttGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCTCGCAGGATATTAAATTCCTTGCATCACAGAACCCGGGTTATCAGGCCGGTATGGCAATGCTATCGTTTGTGGTATTTGCCATTTTTGCCTATGGCGGaa  <  5:222867/148‑1 (MQ=255)

GCCGGACTGGAGCCTACGCAGGTGGTTGGTCTGCTGGCTGTGGCATGGATGATTCTGGTCACCGTCGTTGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCGGGTTATCAGTCCGGTCTGGCAATGCTATCGTTTGTGGTATTTGCCATTTTTGCCTATGGCGGAA  >  NC_000913/4384214‑4384505

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.