| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,335,035 | Δ726 bp | ymiA–yciX | ymiA, yciX | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1335035 | 1335760 | 726 | 28 [0] | [0] 28 | ymiA–yciX | ymiA,yciX |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1335034 | 0 (0.000) | 28 (0.670) | 26/258 | 0.8 | 100% | intergenic (+205/‑90) | cysB/ymiA | N‑acetylserine‑responsive cysteine regulon transcriptional activator; autorepressor/uncharacterized protein |
| ? | NC_000913 | 1335761 = | 0 (0.000) | intergenic (+303/‑70) | yciX/acnA | uncharacterized protein/aconitate hydratase 1; aconitase A | |||||
ACTTATTTCTATACCGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGGTTAGCAATGCCTTCTGGAAAT > NC_000913/1334893‑1335174 | aCTTATTTCTATACCGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgt < 2:119596‑M1/148‑7 (MQ=255) taCCGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaa < 1:173563‑M1/148‑18 (MQ=255) cGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatatt < 6:176394‑M1/149‑22 (MQ=255) cGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaa > 8:69324‑M1/1‑128 (MQ=255) cGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaa < 7:69324‑M1/145‑18 (MQ=255) aaTATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGTgtttgtgttatctttaatattcaccct > 7:14541‑M1/1‑121 (MQ=255) atatTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctga < 5:81701‑M1/149‑30 (MQ=255) tatTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaat > 2:60041‑M1/1‑119 (MQ=255) tatTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaat < 1:60041‑M1/137‑19 (MQ=255) cTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACACGCCTCGCAAACTACAGTTTTCAACTATATATTTCAGGGCAAAAGATTGAATTATTCACTGGgtttgtgtgatctttaatattcaccctgaagagaaccaggg > 7:33006‑M1/1‑108 (MQ=255) aTTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcat > 4:22871‑M1/1‑90 (MQ=255) ccTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaag > 6:147581‑M1/1‑86 (MQ=255) tCTAATTACCCGCCTCGCAAACTCCAGTTTTCTAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatct < 1:56381‑M1/85‑14 (MQ=255) tCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatc < 3:154815‑M1/84‑13 (MQ=255) tCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatc > 4:154815‑M1/1‑72 (MQ=255) tAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcacactgaagagaatcagtgcttagcaaccctgtcattaaggaggacctatgtcgtc > 5:188085‑M1/1‑70 (MQ=255) ccGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctac > 8:99851‑M1/1‑63 (MQ=255) gCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaagg < 5:172270‑M1/124‑64 (MQ=255) gCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaagg > 6:172270‑M1/1‑61 (MQ=255) tCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaa < 5:147581‑M1/149‑92 (MQ=255) aaaCTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggag < 2:18818‑M1/122‑69 (MQ=255) aaaCTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggag > 1:18818‑M1/1‑54 (MQ=255) cAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaag < 3:22871‑M1/148‑101 (MQ=255) cAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaag < 7:99851‑M1/148‑101 (MQ=255) aaaTATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttc < 2:142282‑M1/85‑46 (MQ=255) aaaTATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttc > 1:142282‑M1/1‑40 (MQ=255) agtgcaaaaGATTGAATTATTCACTGGgtttgggatatctttaatattcaccctgaagataaccagggcttcgcaaccctgtcattacggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagat < 8:33006‑M1/144‑122 (MQ=255) ttCACTGGgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccagtaaggacacgttgcaggccaaagataaaacttaccactactaca < 8:14541‑M1/148‑141 (MQ=255) | ACTTATTTCTATACCGTGCACAATATTTTTATCCCTCATATTTATAGGGTAAATTACCTGTAAAGTAGTGTCTAATTACCCGCCTCGCAAACTCCAGTTTTCAAATATCTATTTCAGGTCAAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGGTTAGCAATGCCTTCTGGAAAT > NC_000913/1334893‑1335174 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |