Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,335,762 IS5 (–) +4 bp intergenic (+304/‑66) yciX → / → acnA uncharacterized protein/aconitate hydratase 1; aconitase A

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1335762 =0 (0.000)71 (0.830) 54/282 0.6 100% intergenic (+304/‑69) yciX/acnA uncharacterized protein/aconitate hydratase 1; aconitase A
?NC_000913 = 2290113 NA (NA)noncoding (1/1195 nt) IS5 repeat region
* ? NC_000913 = 13357650 (0.000)82 (0.950) 63/282 0.3 100% intergenic (+307/‑66) yciX/acnA uncharacterized protein/aconitate hydratase 1; aconitase A
?NC_000913 2101749 = NA (NA)noncoding (1195/1195 nt) IS5 repeat region

Only 100 of 157 total aligned reads displayed.

TCTGTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCT  >  NC_000913/1335619‑1335910
                                                                                                                                                  |                                                                                                                                                 
tctGTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGg                                                                                                                                                  >  5:146818‑M1/1‑147 (MQ=255)
  tGTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCGGCGGCGGGGTGGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTAACAAATCGTTACCCGATGTTtgcg                                                                                                                                                 >  6:26192/1‑145 (MQ=255)
    tCGATTCTCTTCTGGGCCGAACTCCTCTGGATCATTACTAACTTATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTAATCTTTTATCAATTTTGGGTGTTATCAAATCGTTACGCGATGTTTGggaag                                                                                                                                              <  6:67236‑M1/148‑6 (MQ=255)
             ttctGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaat                                                                                                                                      <  1:151731‑M1/147‑14 (MQ=255)
             ttctGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaat                                                                                                                                      >  7:264551‑M1/1‑134 (MQ=255)
                  ggCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcgg                                                                                                                                <  5:144123‑M1/148‑20 (MQ=255)
                  ggCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcgg                                                                                                                                <  7:275947‑M1/148‑20 (MQ=255)
                  ggCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcgg                                                                                                                                <  8:264551‑M1/148‑20 (MQ=255)
                   gtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctcaagatgacaaacatgatctcatataacggacttgttcgcaccttccTTTGTGGTATCTTTAATATTCAccc                                                                                                                              <  1:18475‑M1/25‑1 (MQ=255)
                     cGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcgg                                                                                                                                <  8:400223‑M1/145‑20 (MQ=255)
                        acggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaccatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTg                                                                                                                            <  3:328788‑M1/27‑1 (MQ=255)
                        acggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTg                                                                                                                            <  1:126208‑M1/27‑1 (MQ=255)
                        acggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAag                                                                                                                         >  1:209334‑M1/120‑149 (MQ=255)
                         cggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAaga                                                                                                                        >  8:327891‑M1/119‑149 (MQ=255)
                          ggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGaa                                                                                                                          <  2:156589‑M1/29‑1 (MQ=255)
                          ggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGaa                                                                                                                          <  3:352568‑M1/29‑1 (MQ=255)
                            ctctGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTtg                                                                                                                                                   >  6:127606/1‑119 (MQ=255)
                            ctctGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttc                                                                                                                     >  1:318161‑M1/1‑119 (MQ=255)
                            ctctGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttc                                                                                                                     >  7:229586‑M1/1‑119 (MQ=255)
                            ctctGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagaggggaatttcttc                                                                                                                     >  3:6666‑M1/1‑119 (MQ=255)
                              cttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAAt                                                                                                                    <  2:38618‑M1/35‑1 (MQ=255)
                                ggATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcgg                                                                                                                 >  2:331308‑M1/1‑115 (MQ=255)
                                 gATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgggaataagcggggaaattcttctcggc                                                                                                                <  6:195158‑M1/149‑36 (MQ=255)
                                 gATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggc                                                                                                                >  3:46534‑M1/1‑114 (MQ=255)
                                    cATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcg                                                                                                                  >  3:359634‑M1/1‑111 (MQ=255)
                                    cATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcg                                                                                                                  <  4:359634‑M1/144‑34 (MQ=255)
                                      ttACTCACTGATTCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgact                                                                                                           <  3:149812‑M1/149‑41 (MQ=255)
                                            cactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAAc                                                                                                      >  1:71488‑M1/100‑148 (MQ=255)
                                               tgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTg                                                                                                  <  8:116019‑M1/53‑1 (MQ=255)
                                                aatgacaaccccgccGCAGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcattt                                                                                                  >  2:354206‑M1/8‑99 (MQ=255)
                                                aTCCTTGCCCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcattt                                                                                                  <  8:360823‑M1/148‑50 (MQ=255)
                                                aTCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcattt                                                                                                  >  6:132760‑M1/1‑99 (MQ=255)
                                                aTCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcattt                                                                                                  >  7:397445‑M1/1‑99 (MQ=255)
                                                 tCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttca                                                                                                >  3:298614‑M1/1‑98 (MQ=255)
                                                   ggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccatatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCa                                                                                               >  6:26731‑M1/93‑148 (MQ=255)
                                                    ttGACCCCGCCGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttc                                                                                                 <  6:61342‑M1/145‑51 (MQ=255)
                                                     cgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTa                                                                                            >  7:116019‑M1/91‑149 (MQ=255)
                                                      gaatgtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGCAGAGAATCAGGGCTTCGCAACCCTGTCATTaa                                                                                           >  5:208535‑M1/90‑149 (MQ=255)
                                                       aaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAag                                                                                          >  1:38618‑M1/89‑149 (MQ=255)
                                                        ccccGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttc                                                                                         <  4:243511‑M1/149‑59 (MQ=255)
                                                         cccGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttca                                                                                        >  5:20417‑M1/1‑90 (MQ=255)
                                                              tGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt                                                                                   <  4:46534‑M1/149‑65 (MQ=255)
                                                                tgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTa                                                                                 <  8:228022‑M1/70‑1 (MQ=255)
                                                                 ggcggGTTTGTCATTTGCGTTGCCTCAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGTTGTTTTggaaggtgctaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttttag                                                                                <  4:345358‑M1/149‑68 (MQ=255)
                                                                   cggTGTTGTCATTTGCTTTGCCACAAGGGTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaatttgagaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgag                                                                                <  6:178999‑M1/147‑68 (MQ=255)
                                                                             aTTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttc                                                                     <  5:7447‑M1/148‑79 (MQ=255)
                                                                                 gctttgcCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccg                                                                >  5:34129‑M1/1‑66 (MQ=255)
                                                                                 ccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTAc                                                                  <  8:297383‑M1/85‑1 (MQ=255)
                                                                                   tttgcCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgt                                                               >  7:100291‑M1/1‑64 (MQ=255)
                                                                                   tttgcCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgt                                                               >  8:244678‑M1/1‑64 (MQ=255)
                                                                                   tttgcCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcattccatttcttcatgttt                                                                                   <  3:54220‑M1/128‑65 (MQ=255)
                                                                                   tttgcCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcattccatttcttcatgttt                                                                                   >  4:54220‑M1/1‑64 (MQ=255)
                                                                                        cacaAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgc                                                         >  1:365201‑M1/1‑59 (MQ=255)
                                                                                         acaAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttaatgtttgagccgattttttctcccgtaaatgcc                                                        >  3:218155‑M1/1‑58 (MQ=255)
                                                                                          caAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcat                                                                                               <  3:96043‑M1/109‑53 (MQ=255)
                                                                                           aaGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcctt                                                      <  1:354206‑M1/149‑94 (MQ=255)
                                                                                            aGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcctt                                                      >  3:358741‑M1/1‑55 (MQ=255)
                                                                                             ggTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcctt                                                      <  7:247189‑M1/147‑94 (MQ=255)
                                                                                             gctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAg                                                    >  2:126208‑M1/51‑149 (MQ=255)
                                                                                               tttCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaat                                                  <  8:397445‑M1/149‑98 (MQ=255)
                                                                                               tccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGa                                                  <  8:228467‑M1/101‑1 (MQ=255)
                                                                                                ccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAAACCTGTCATTAAGGAGGAGCTATCTCGTCAACCCTACGAGAAGCCAGTAAGGa                                                  <  1:404799‑M1/101‑1 (MQ=255)
                                                                                                  ctcctcTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatca                                                <  5:31319‑M1/148‑100 (MQ=255)
                                                                                                  agatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAaggagg                                                                                      >  1:264879‑M1/46‑110 (MQ=255)
                                                                                                     ctctTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatgtcttcatggttgagccgattttttctcccgtaaatgccttgaatctgcc                                             >  4:280086‑M1/1‑46 (MQ=255)
                                                                                                       acaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGc                                          >  4:352660‑M1/41‑149 (MQ=255)
                                                                                                        ttttATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt                                                                                   <  8:59840‑M1/107‑65 (MQ=255)
                                                                                                        ttttATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt                                                                                   >  7:59840‑M1/1‑43 (MQ=255)
                                                                                                        caaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTg                                           <  2:260541‑M1/108‑1 (MQ=255)
                                                                                                              cAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagacc                                   >  7:177774‑M1/1‑37 (MQ=255)
                                                                                                               gatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCa                                    <  2:25980‑M1/115‑1 (MQ=255)
                                                                                                                aTTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggatgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccatgaatcagcctatttagaccgt                                 >  8:382473‑M1/1‑35 (MQ=255)
                                                                                                                 tttGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggatattcttctcggctgactcagtcctttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtt                                >  5:111478‑M1/1‑34 (MQ=255)
                                                                                                                 tctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGtt                                            >  3:298740‑M1/31‑137 (MQ=255)
                                                                                                                 tctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGtt                                            <  4:298740‑M1/107‑1 (MQ=255)
                                                                                                                 tctcatataagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGtt                                            <  4:303993‑M1/107‑1 (MQ=255)
                                                                                                                   tcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGAt                               <  1:299117‑M1/120‑1 (MQ=255)
                                                                                                                      tatcagggacttgttcgcaccttccTATGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATaaaa                           >  3:330941‑M1/26‑149 (MQ=255)
                                                                                                                        tcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCAGTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACt                         <  7:314811‑M1/126‑1 (MQ=255)
                                                                                                                          agggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACtt                        >  7:228022‑M1/22‑148 (MQ=255)
                                                                                                                           tggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGACTAAGGGCTTCGAAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCAACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTAc                      >  5:84622‑M1/21‑149 (MQ=255)
                                                                                                                           gggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTa                                                                   <  7:382725‑M1/84‑1 (MQ=255)
                                                                                                                            ggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTAc                      <  4:91908‑M1/129‑1 (MQ=255)
                                                                                                                            ggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCATACGAGAAGACAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTAc                      <  6:165775‑M1/129‑1 (MQ=255)
                                                                                                                             tCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatt                     >  8:15566‑M1/1‑22 (MQ=255)
                                                                                                                                  gttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCacta                 >  2:304844‑M1/14‑147 (MQ=255)
                                                                                                                                    gTTACGCGATGTTTGggaaggtgcgaataagcggcgaacttctgctcggctgactcagtcatttcatttcttcatgtttgagccgagtttttctcccgtaaattccttgaatcagcctatttagaccgtttcttcgccatttaaggc               <  4:218155‑M1/147‑133 (MQ=255)
                                                                                                                                       caccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGc          <  2:117592‑M1/141‑1 (MQ=255)
                                                                                                                                       caccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCAATACTACAGc          <  7:162147‑M1/141‑1 (MQ=255)
                                                                                                                                        cgccaggtttggcaaggtgcgaataagcgcggaaattcttctccgctgactcagtcatttcatttcttcatgtttgagccgattttatctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatc         <  4:6666‑M1/143‑139 (MQ=255)
                                                                                                                                          cttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAg                                                    >  7:409254‑M1/6‑104 (MQ=255)
                                                                                                                                          cttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCactact               <  5:87600‑M1/136‑1 (MQ=255)
                                                                                                                                          cttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCactact               >  6:87600‑M1/6‑141 (MQ=255)
                                                                                                                                          cgATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccc       <  8:177774‑M1/149‑141 (MQ=255)
                                                                                                                                          cgATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccc       >  4:136826‑M1/1‑9 (MQ=255)
                                                                                                                                           ttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATaaaa                           <  7:325557‑M1/124‑1 (MQ=255)
                                                                                                                                           ttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATaaaa                           >  8:325557‑M1/5‑128 (MQ=255)
                                                                                                                                           gATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccc       >  4:1487‑M1/1‑8 (MQ=255)
                                                                                                                                            aTGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcccca     <  1:331308‑M1/149‑143 (MQ=255)
                                                                                                                                               tttGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGGCGTCAACCCTACGAGAAGCCAGTAAGGACCCGTTGCAGGCCAAAGATAAAACTTACAACTACTACAGCCTGCCGCt  >  2:310696/1‑149 (MQ=255)
                                                                                                                                                  |                                                                                                                                                 
TCTGTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCT  >  NC_000913/1335619‑1335910

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.