New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4584195 =36 (0.970)6 (0.170) 6/242 3.6 15.4% coding (2567/3513 nt) hsdR endonuclease R Type I restriction enzyme
?NC_000913 4584232 = 32 (0.920)coding (2530/3513 nt) hsdR endonuclease R Type I restriction enzyme
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ATCCGCTTCGGTGATTTTATAGGTTTCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCGGCTGCGTACTTTACGCAGGAACACGATATTACAGATCGACGGAATATCGACGCCGGTCGTCAGCA  >  NC_000913/4584101‑4584378
                                                                                                                                   |                                                                                                                                                  
aTCCGCTTCGGTGATTTTATAGGTTTCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCATAAAGc                                                                                                                                   >  8:17258/1‑149 (MQ=255)
    gCTTCGGTGATTTTATAGGTTTCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGt                                                                                                                               >  3:11477/1‑149 (MQ=255)
       tCGGTGATGTTATAGGGTTCTGAATCGGTAATTTCATTGACCAGCGTGTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCGCTCCAGCGTGCTGTAGAAATCGACACAGTCAAAAATCTTAAAGCTGGgttt                                                                                                                            <  4:14286/149‑1 (MQ=255)
          gTGATTTTATAGGTTTCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAACTCTTAAAGCTGGTTTTAt                                                                                                                          >  4:120842/1‑148 (MQ=255)
              ttttATAGGTTTCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTa                                                                                                                           <  1:14105/143‑1 (MQ=255)
              ttttATAGGTTTCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTa                                                                                                                           >  2:14105/1‑143 (MQ=255)
                     ggTTTCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCggg                                                                                                               <  2:175515/148‑1 (MQ=255)
                      gTTTCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCa                                                                                                             >  5:148295/1‑149 (MQ=255)
                       tttCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCa                                                                                                             >  1:152764/1‑148 (MQ=255)
                          cTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATaa                                                                                                          <  6:148295/148‑1 (MQ=255)
                          cTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATaa                                                                                                          <  3:120842/148‑1 (MQ=255)
                               tCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGt                                                                                                    <  7:17258/149‑1 (MQ=255)
                                  gTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGgc                                                                                                 >  7:239/1‑149 (MQ=255)
                                        tCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGc                                                                                            <  4:11477/148‑1 (MQ=255)
                                          aTTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCgg                                                                                                                >  6:165747/1‑126 (MQ=255)
                                          aTTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCgg                                                                                                                <  5:165747/126‑1 (MQ=255)
                                              aCCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTTTTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCa                                                                                      <  5:3502/148‑1 (MQ=255)
                                                  gCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGt                                                                                 <  2:152764/149‑1 (MQ=255)
                                                                  cTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCGGc                                                                 >  2:130584/1‑149 (MQ=255)
                                                                       ggCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCGGCTGCg                                                             >  5:187/1‑148 (MQ=255)
                                                                                    cGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTc                                                                                       >  7:131097/1‑109 (MQ=255)
                                                                                    cGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTc                                                                                       <  8:131097/109‑1 (MQ=255)
                                                                                              gtgtCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCGGCTGCGTACTTTACGCAg                                                 >  5:116266/1‑137 (MQ=255)
                                                                                              gtgtCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCGGCTGCGTACTTTACGCAg                                                 <  6:116266/137‑1 (MQ=255)
                                                                                                   gACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCATAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCGGCTGCGTACTTTACGCAGGAACACGATATTa                                    >  2:68711/1‑145 (MQ=255)
                                                                                                          tcCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCGGCTGCGTACTTTACGCAGGAACACGATATTACAGATCGACg                          >  6:12913/1‑148 (MQ=255)
                                                                                                               cGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCGGCTGCGTACTTTACGCAGGAACACGATATTACAGATCGACGGAatat                    <  5:12913/149‑1 (MQ=255)
                                                                                                                     gTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCGGCTGCGTACTTTACGCAg                                                 <  2:70787/114‑1 (MQ=255)
                                                                                                                       aGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCGGCTGCGTACTTTACGCAg                                                 <  1:170599/112‑1 (MQ=255)
                                                                                                                       aGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCGGCTGCGTACTTTACGCAg                                                 >  2:170599/1‑112 (MQ=255)
                                                                                                                         atatCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTc                                                                               >  5:147847/1‑80 (MQ=255)
                                                                                                                         atatCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTc                                                                               <  6:147847/80‑1 (MQ=255)
                                                                                                                            tCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCGGCTGCGTACTTTACGCAGGAACACGATATTACAGATCGACGGAATATCGACGCCGgtcgt       >  5:8323/1‑149 (MQ=255)
                                                                                                                               acacAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCGGCTGCGTACTTTACGCAGGAACACGATATTa                                    <  2:24401/117‑1 (MQ=255)
                                                                                                                               acacAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCGGCTGCGTACTTTACGCAGGAACACGATATTa                                    >  1:24401/1‑117 (MQ=255)
                                                                                                                                 acaGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCgg                                                                  <  4:154588/85‑1 (MQ=255)
                                                                                                                                 acaGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCgg                                                                  >  3:154588/1‑85 (MQ=255)
                                                                                                                                 acaGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCGGCTGCGTACTTTACGCAGGAACACGATATTACAGATCGACGGAATATCGACGCCGGTCGTcagca  <  8:239/149‑1 (MQ=255)
                                                                                                                                   aGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCGGCTGCGTACTTTACGCAGGAACACGATATTa                                    >  2:58189/1‑113 (MQ=255)
                                                                                                                                   aGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCGGCTGCGTACTTTACGCAGGAACACGATATTa                                    <  1:58189/113‑1 (MQ=255)
                                                                                                                                   aGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCGGCTGCGTACTTTACGCAGGAACACGATATTACAGATCGACGGAat                      >  1:141049/1‑127 (MQ=255)
                                                                                                                                   aGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCGGCTGCGTACTTTACGCAGGAACACGATATTACAGATCGACGGAat                      <  2:141049/127‑1 (MQ=255)
                                                                                                                                   |                                                                                                                                                  
ATCCGCTTCGGTGATTTTATAGGTTTCTGAATCGGTAATTTCATTGACCAGCGTTTGCAGTTCCACCTTCGGGCGCACCACCACCGGACGCATGGTGTCGACGCTCTCCAGCGTGCTGTAGATATCGACACAGTCAAAAATCTTAAAGCTGGTTTTATTCACCTCCGGGCATAAGCGCGTGGCGCGGCCTTTCATCTGTTCGTACAGAATGCGGCTGCGTACTTTACGCAGGAACACGATATTACAGATCGACGGAATATCGACGCCGGTCGTCAGCA  >  NC_000913/4584101‑4584378

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.