New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1522204	33 (0.890)	6 (0.180)	6/236	3.5	16.1%	coding (862/2103 nt)	yncD	putative iron outer membrane transporter
	?	NC_000913	= 1522222	32 (0.940)					coding (844/2103 nt)	yncD	putative iron outer membrane transporter
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GGTAATCACGCCGCCCGCATGTGACGGGTTAAGTTGTGGTGCCATGGGTATTGACTGGTACTGGGTCGTTTCTCGCTCTCCGGCATACATCATCACACTCATATCATCCCGCGAACTCAGGCTACGCTCATAGCGCAACCCAGCCTGAGTTTGCTTGATGGTTTTTCGCGTGTCGTACTGTTCTGCACGAGGCGCTTGTTGTGGATTAGCCTTCCATTCTGCTTTGGTTAGCCCACCTGGGTCATCTGCTTTGATATCCACACTATTGAAAATCAGACTTAATTTGCT  >  NC_000913/1522082‑1522369                                                                                                                                             |                                                                                                                                                    ggTAATCACGCCGCCCGCATGTGACGGGTTAAGTTGTGGTGCCATGGGTATTGACTGGTACTGGGTCGTTTCTCGCTCTCCGGCATACATCATCACACTCATATCATCCCGCGAACTCAGGCTACGCTCATAGCGCAACCCAGCCTGAg                                                                                                                                             >  1:103366/1‑149 (MQ=255)            cgcccgcATGTGACGGGTTAAGTTGTGGTGCCATGGGTATTGACTGGTACTGGGTCGTTTCTCGCTCTCCGGCATACATCATCACACTCATATCATCCCGCGAACTCAGGCTACGCTCATAGCGCAACCCAGCCTGAGTTTGCTTGATg                                                                                                                                  <  1:82508/149‑1 (MQ=255)              cccgcATGTGACGGGTTAAGTTGTGGTGCCATGGGTATTGACTGGTACTGGGTCGTTTCTCGCTCTCCGGCATACATCATCACACTCATATCATCCCGCGAACTCAGGCTACGCTCATAGCGCAACCCAGCCTGAGtt                                                                                                                                           <  4:111406/138‑1 (MQ=255)              cccgcATGTGACGGGTTAAGTTGTGGTGCCATGGGTATTGACTGGTACTGGGTCGTTTCTCGCTCTCCGGCATACATCATCACACTCATATCATCCCGCGAACTCAGGCTACGCTCATAGCGCAACCCAGCCTGAGtt                                                                                                                                           >  3:111406/1‑138 (MQ=255)                                                 tATTGACTGGTACTGGGTCGTTTCTCGCTCTCCGGCATACATCATCACACTCATATCATCCCGCGAACTCAGGCTACGCTCATAGCGCAACCCAGCCTGAGTTTGCTTGATGGTTTTTCGCGTGTCGTACTGtt                                                                                                            <  4:27889/134‑1 (MQ=255)                                                 tATTGACTGGTACTGGGTCGTTTCTCGCTCTCCGGCATACATCATCACACTCATATCATCCCGCGAACTCAGGCTACGCTCATAGCGCAACCCAGCCTGAGTTTGCTTGATGGTTTTTCGCGTGTCGTACTGtt                                                                                                            >  3:27889/1‑134 (MQ=255)                                                          gTACTGGGTCGTTTCTCGCTCTCCGGCATACATCATCACACTCATATCATCCCGCGAACTCAGGCTACGCTCATAGCGCAACCCAGCCTGAGTTTGCTTGATGGTTTTTCGCGTGTCGTACTGTTCTGCACGAGGCGCTTGTTGTGGa                                                                                     <  2:103366/148‑1 (MQ=255)                                                           tACTGGGTCGTTTCTCGCTCTCCGGCATACATCATCACACTCATATCATCCCGCGAACTCAGGCTACGCTCATAGCGCAACCCAGCCTGAGTTTGCTTGATGGTTTTTCGCGTGTCGTACTGTTCTGCACGAGGCGCTTGTTGTGGAtt                                                                                   >  1:170938/1‑149 (MQ=255)                                                              tGGGTCGTTTCTCGCTCTCCGGCATACATCATCACACTCATATCATCCCGCGAACTCAGGCTACGCTCATAGCGCAACCCAGCCTGAGTTTGCTTGATGGTTTTTCGCGTGTCGTACTGTTCTg                                                                                                         <  6:9812/124‑1 (MQ=255)                                                              tGGGTCGTTTCTCGCTCTCCGGCATACATCATCACACTCATATCATCCCGCGAACTCAGGCTACGCTCATAGCGCAACCCAGCCTGAGTTTGCTTGATGGTTTTTCGCGTGTCGTACTGTTCTg                                                                                                         >  5:9812/1‑124 (MQ=255)                                                              tGGGTCGTTTCTCGCTCTCCGGCATACATCATCACACTCATATCATCCCGCGAACTCAGGCTACGCTCATAGCGCAACCCAGCCTGAGTTTGCTTGATGGTTTTTCGCGTGTCGTACTGTTCTGCACGAGGCGCTTGTTGTGGATTAGc                                                                                >  3:45806/1‑149 (MQ=255)                                                                     tttCTCGCTCTCCGGCATACATCATCACACTCATATCATCCCGCGAACTCAGGCTACGCTCATAGCGCAACCCAGCCTGAGTTTGCTTGATGGTTTTTCGCGTGTCGTACTGTTCTGCACGAGGCGCTTGTTGTGGAt                                                                                    <  2:23626/138‑1 (MQ=255)                                                                     tttCTCGCTCTCCGGCATACATCATCACACTCATATCATCCCGCGAACTCAGGCTACGCTCATAGCGCAACCCAGCCTGAGTTTGCTTGATGGTTTTTCGCGTGTCGTACTGTTCTGCACGAGGCGCTTGTTGTGGAt                                                                                    >  1:23626/1‑138 (MQ=255)                                                                           gCTCTCCGGCATACATCATCACACTCATATCATCCCGCGAACTCAGGCTACGCTCATAGCGCAACCCAGCCTGAGTTTGCTTGATGGTTTTTCGCGTGTCGTACTGTTCTGCACGAGGCGCTTGTTGTGGATTAGCCTTCCATTCTGCt                                                                   >  7:95408/1‑149 (MQ=255)                                                                                 cGGCATACATCATCACACTCATATCATCCCGCGAACTCAGGCTACGCTCATAGCGCAACCCAGCCTGAGTTTGCTTGATGGTTTTTCGCGTGTCGTACTGTTCTGCACGAGGCGCTTGTTGTGGATTAGCCTTCCATTCTGCTTTGGt                                                              >  5:98106/1‑148 (MQ=255)                                                                                   gCATACATCATCACACTCATATCATCCCGCGAACTCAGGCTACGCTCATAGCGCAACCCAGCCTGAGTTTGCt                                                                                                                                       >  6:149175/1‑73 (MQ=255)                                                                                   gCATACATCATCACACTCATATCATCCCGCGAACTCAGGCTACGCTCATAGCGCAACCCAGCCTGAGTTTGCt                                                                                                                                       <  5:149175/73‑1 (MQ=255)                                                                                       aCATCATCACACTCATATCATCCCGCGAACTCAGGCTACGCTCATAGCGCAACCCAGCCTGAGTTTGCTTGa                                                                                                                                    >  1:44880/1‑72 (MQ=255)                                                                                       aCATCATCACACTCATATCATCCCGCGAACTCAGGCTACGCTCATAGCGCAACCCAGCCTGAGTTTGCTTGa                                                                                                                                    <  2:44880/72‑1 (MQ=255)                                                                                               acacTCATATCATCCCGCGAACTCAGGCTACGCTCATAGCGCAACCCAGCCTGAGTTTGCTTGATGGTTTTTCGCGTGTCGTACTGTTCTGCACGAGGCGCTTGTTGTGGATTAGCCTTCCATTCTGCTTTGGTTAGCCCACCTGGGTc                                               <  4:45806/149‑1 (MQ=255)                                                                                                        tcatcCCGCGAACTCAGGCTACGCTCATAGCGCAACCCAGCCTGAGTTTGCTTGATGGTTTTTCGCGTGTCGTACTGTTCTGCACGAGGCGCTTGTTGTGGATTAGCCTTCCATTCTGCTTTGGTTAGCCCACCTGGGTCATCTGCtt                                       <  8:95408/148‑1 (MQ=255)                                                                                                             ccGCGAACTCAGGCTACGCTCATAGCGCAACCCAGCCTGAGTTTGCTTGATGGTTTTTCGCGTGTCGTACTGTTCTGCACGAGGCGCTTGTTGTGGATTAGCCTTCCATTCTGCTTTGGTTAGCCCACCTgg                                                  >  1:108317/1‑132 (MQ=255)                                                                                                             ccGCGAACTCAGGCTACGCTCATAGCGCAACCCAGCCTGAGTTTGCTTGATGGTTTTTCGCGTGTCGTACTGTTCTGCACGAGGCGCTTGTTGTGGATTAGCCTTCCATTCTGCTTTGGTTAGCCCACCTgg                                                  <  2:108317/132‑1 (MQ=255)                                                                                                              cgcgAACTCAGGCTACGCTCATAGCGCAACCCAGCCTGAGTTTGCTTGATGGTTTTTCGCGTGTCGTACTGTTCTGCACGAGGCGCTTGTTGTGGATTAGCCTTCCATTCTGCTTTGGtt                                                             >  2:125550/1‑120 (MQ=255)                                                                                                                       aGGCTACGCTCATAGCGCAACCCAGCCTGAGTTTGCTTGATGGTTTTTCGCGTGTCGTACTGTTCTGCACGAGGCGCTTGTTGTGGATTAGCCTTCCATTCTGCTTTGGTTAGCCCACCTGGGTCATCTGCTTTGATATCCACACTAtt                       >  5:114540/1‑149 (MQ=255)                                                                                                                         gCTACGCTCATAGCGCAACCCAGCCTGAGTTTGCTTGATGGTTTTTCGCGTGTCGTACTGTTCTGCACGAGGCGCTTGTTGTGGATTAGCCTTCCATTCTGCTTTGGTTAGCCCACCTGGGTCATCTGCTTTGATATCcac                             <  4:113721/141‑1 (MQ=255)                                                                                                                         gCTACGCTCATAGCGCAACCCAGCCTGAGTTTGCTTGATGGTTTTTCGCGTGTCGTACTGTTCTGCACGAGGCGCTTGTTGTGGATTAGCCTTCCATTCTGCTTTGGTTAGCCCACCTGGGTCATCTGCTTTGATATCcac                             >  3:113721/1‑141 (MQ=255)                                                                                                                          cTACGCTCATAGCGCAACCCAGCCTGAGTTTGCTTGATGGTTTTTCGCGTGTCGTACTGTTCTGCACGAGGCGCTTGTTGTGGATTAGCCTTCCATTCTGCTTTGGTTAGCCCACCTGGGTCATCTGCTTTg                                     >  2:151714/1‑132 (MQ=255)                                                                                                                          cTACGCTCATAGCGCAACCCAGCCTGAGTTTGCTTGATGGTTTTTCGCGTGTCGTACTGTTCTGCACGAGGCGCTTGTTGTGGATTAGCCTTCCATTCTGCTTTGGTTAGCCCACCTGGGTCATCTGCTTTg                                     <  1:151714/132‑1 (MQ=255)                                                                                                                                tCATAGCGCAACCCAGCCTGAGTTTGCTTGATGGTTTTTCGCGTGTCGTACTGTTCTGCACGAGGCGCTTGTTGTGGATTAGCCTTCCATTCTGCTTTGGTTAg                                                           <  4:147186/104‑1 (MQ=255)                                                                                                                                tCATAGCGCAACCCAGCCTGAGTTTGCTTGATGGTTTTTCGCGTGTCGTACTGTTCTGCACGAGGCGCTTGTTGTGGATTAGCCTTCCATTCTGCTTTGGTTAg                                                           >  3:147186/1‑104 (MQ=255)                                                                                                                                       gcAACCCAGCCTGAGTTTGCTTGATGGTTTTTCGCGTGTCGTACTGTTCTGCACGAGGCGCTTGTTGTGGATTAGCCTTCCATTCTGCTTTGGTTAGCCCACCTGGGTCATCTGCTTTGATATCCACACTATTGAAAATCAGACTTAAt       <  2:170938/149‑1 (MQ=255)                                                                                                                                          aCCCAGCCTGAGTTTGCTTGATGGTTTTTCGCGTGTCGTACTGTTCTGCACGAGGCGCTTGTTGTGGATTAGCCTTCCATTCTGCTTTg                                                                >  4:135483/1‑89 (MQ=255)                                                                                                                                          aCCCAGCCTGAGTTTGCTTGATGGTTTTTCGCGTGTCGTACTGTTCTGCACGAGGCGCTTGTTGTGGATTAGCCTTCCATTCTGCTTTg                                                                <  3:135483/89‑1 (MQ=255)                                                                                                                                            ccAGCCTGAGTTTGCTTGATGGTTTTTCGCGTGTCGTACTGTTCTGCACGAGGCGCTTGTTGTGGATTAGCCTTCCATTCTGCTTTGGTTAGCCCACCTGGGTAATCTGCTTTGATATCCACACTATTGAAAATCAGACTTAATTTGCt  >  6:123937/1‑149 (MQ=255)                                                                                                                                             |                                                                                                                                                    GGTAATCACGCCGCCCGCATGTGACGGGTTAAGTTGTGGTGCCATGGGTATTGACTGGTACTGGGTCGTTTCTCGCTCTCCGGCATACATCATCACACTCATATCATCCCGCGAACTCAGGCTACGCTCATAGCGCAACCCAGCCTGAGTTTGCTTGATGGTTTTTCGCGTGTCGTACTGTTCTGCACGAGGCGCTTGTTGTGGATTAGCCTTCCATTCTGCTTTGGTTAGCCCACCTGGGTCATCTGCTTTGATATCCACACTATTGAAAATCAGACTTAATTTGCT  >  NC_000913/1522082‑1522369

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.