New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 1475100 | 49 (1.630) | 4 (0.150) | 4/202 | 2.9 | 7.9% | intergenic (+19/‑44) | ydbC/ydbD | putative NAD(P)‑binding oxidoreductase/PF10971 family putative periplasmic methylglyoxal resistance protein |
? | NC_000913 | = 1475106 | 49 (1.790) | intergenic (+25/‑38) | ydbC/ydbD | putative NAD(P)‑binding oxidoreductase/PF10971 family putative periplasmic methylglyoxal resistance protein | |||||
Rejected: Frequency below/above cutoff threshold. |
GCGAGAATAACGAATATACAAAAGGGAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1475072‑1475100 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaagggaaaTGCATCTTTCCCTTTTGTATATTCGTTATTCTCGCGAAATACCATCCAACGTAGACAACACTTCCTCAGAAAGATGCAATTTTTCAGCAGCCATATTCTCCC < NC_000913/1475106‑1475005 GCGAGAATAACGAATATACAAAAGGGAAATGCATCTTTCCCTTTTGTATATTCGTTATTCTCGCGAAATACCATCCAACGTAGA > 1:156729/1‑84 GCGAGAATAACGAATATACAAAAGGGAAATGCATCTTTCCCTTTTGTATATTCGTTATTCTCGCGAAATACCATCCAACGTAGA < 2:156729/84‑1 TAACGAATATACAAAAGGGAAAGATGCATTTCCCTTTTGTATATTCGTTATTCTCGCGAAATACCATCCAACGTAGACAACACTTCCTCAGAAAGATGCAATTTTTCAGCAGCCATATTCTCCC < 5:104156/124‑1 TAACGAATATACAAAAGGGAAAGATGCATTTCCCTTTTGTATATTCGTTATTCTCGCGAAATACCATCCAACGTAGACAACACTTCCTCAGAAAGATGCAATTTTTCAGCAGCCATATTCTCCC > 6:104156/1‑124 GCGAGAATAACGAATATACAAAAGGGAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1475072‑1475100 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaagggaaaTGCATCTTTCCCTTTTGTATATTCGTTATTCTCGCGAAATACCATCCAACGTAGACAACACTTCCTCAGAAAGATGCAATTTTTCAGCAGCCATATTCTCCC < NC_000913/1475106‑1475005 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |