New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2565932 =21 (0.700)4 (0.140) 4/206 2.9 16.5% coding (953/1404 nt) eutA reactivating factor for ethanolamine ammonia lyase
?NC_000913 2565963 = 21 (0.750)coding (922/1404 nt) eutA reactivating factor for ethanolamine ammonia lyase
Rejected: Frequency below/above cutoff threshold.

AGATCCAGCTGAATCAGCGCCTGTTGCCAGGCCCCCACCAGATCCGTTTCATCAATCGGGATCGCCACCGGCAAATTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCACCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCCAGCAGCGGGCCAATATCGGCAAAACAGAACGG  >  NC_000913/2565797‑2566059
                                                                                                                                       |                                                                                                                               
aGATCCAGCTGAATCAGCGCCTGTTGCCAGGCCCCCACCAGATCCGTTTCATCAATCGGGATCGCCACCGGCAAATTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGcgcgcccgcgc                                                                                                                     >  2:175162/1‑148 (MQ=255)
                                     ccaGATCCGTTTCATCAATCGGGATCGCCACCGGCAAATTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCACCGTGGCGCGCACGGTTTGCGCCGGAAACTGt                                                                               <  1:175162/149‑1 (MQ=255)
                                                   ccgatattggcccgctgctggcaactgcgctgcatgaccatccgcgcctgcgtgagatgaacgtacagtttccggcgcaaaccgTgc                                                                                                                               <  4:21860‑M1/3‑1 (MQ=255)
                                                   ccgatattggcccgctgctggcaactgcgctgcatgaccatccgcgcctgcgtgagatgaacgtacagtttccggcgcaaaccgTgc                                                                                                                               >  3:21860‑M1/85‑87 (MQ=255)
                                                     aaTCGGGATCGCCACCGGCAAATTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCACCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACg                                                                 >  1:76019/1‑147 (MQ=255)
                                                      aTCGGGATCGCCACCGGCAAATTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCACCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAg                                                              <  2:76019/149‑1 (MQ=255)
                                                                               gctgcatgaccatccgcgcctgcgtgagatgaacgtacagtttccggcgcaaaccgTGCGCGCCCGCGCCAATCACCGTGgc                                                                                                        >  4:73277‑M1/57‑82 (MQ=255)
                                                                               gctgcatgaccatccgcgcctgcgtgagatgaacgtacagtttccggcgcaaaccgTGCGCGCCCGCGCCAATCACCGTGgc                                                                                                        <  3:73277‑M1/26‑1 (MQ=255)
                                                                                  gCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCACCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTc                                                                         >  8:144003/1‑110 (MQ=255)
                                                                                  gCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCACCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTc                                                                         <  7:144003/110‑1 (MQ=255)
                                                                                  gCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCACCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATg                                                     <  3:54071/130‑1 (MQ=255)
                                                                                  gCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCACCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATg                                                     >  4:54071/1‑130 (MQ=255)
                                                                                         catccgcgcctgcgtgagatgaacgtacagtttccggcgcaaaccgTGCGCGCCCGCGCCAATCACCGTg                                                                                                          <  8:118914‑M1/24‑1 (MQ=255)
                                                                                         catccgcgcctgcgtgagatgaacgtacagtttccggcgcaaaccgTGCGCGCCCGCGCCAATCACCGTg                                                                                                          >  7:118914‑M1/47‑70 (MQ=255)
                                                                                            tACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCACCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTc                                                                         <  5:131361/100‑1 (MQ=255)
                                                                                            tACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCACCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTc                                                                         >  6:131361/1‑100 (MQ=255)
                                                                                                 ccTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCACCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCCAGCAGCGGGCCAata                   >  6:57542/1‑149 (MQ=255)
                                                                                                    cAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCACCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCCAGCAGCggg                         <  3:14853/140‑1 (MQ=255)
                                                                                                    cAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCACCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCCAGCAGCggg                         >  4:14853/1‑140 (MQ=255)
                                                                                                     aaGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCACCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCCAGCAGCGGGCCAATATc                 <  5:57542/147‑1 (MQ=255)
                                                                                                                tgctgcCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCACCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGAt                                                      >  8:14993/1‑99 (MQ=255)
                                                                                                                tgctgcCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCACCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGAt                                                      <  7:14993/99‑1 (MQ=255)
                                                                                                                    gcttgagggCGAAAGGGTATGCGCGCCCGCGCCAATCACCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCCAGCAGCGGGCCAATATCGGCAAAACAGAACgg  <  8:61729/143‑1 (MQ=255)
                                                                                                                              gAAAGGGTATGCGCGCCCGCGCCAATCACCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGAt                                                      <  2:72218/85‑1 (MQ=255)
                                                                                                                              gAAAGGGTATGCGCGCCCGCGCCAATCACCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGAt                                                      >  1:72218/1‑85 (MQ=255)
                                                                                                                              gAAAGGGTATGCGCGCCCGCGCCAATCACCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCCAGCAGCGGGCCAATATCGGCAAAAc         <  6:158845/130‑1 (MQ=255)
                                                                                                                              gAAAGGGTATGCGCGCCCGCGCCAATCACCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCCAGCAGCGGGCCAATATCGGCAAAAc         >  5:158845/1‑130 (MQ=255)
                                                                                                                                       |                                                                                                                               
AGATCCAGCTGAATCAGCGCCTGTTGCCAGGCCCCCACCAGATCCGTTTCATCAATCGGGATCGCCACCGGCAAATTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCACCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCCAGCAGCGGGCCAATATCGGCAAAACAGAACGG  >  NC_000913/2565797‑2566059

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.