New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3334936 =137 (1.510)4 (0.050) 4/250 NT 2.9% coding (28/279 nt) sfsB malPQ operon transcriptional activator
?NC_000913 3334956 = 133 (1.520)coding (48/279 nt) sfsB malPQ operon transcriptional activator
Rejected: Frequency below/above cutoff threshold.

Only 100 of 147 total aligned reads displayed.

TATTCTGAATATTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTCCTCAACGCTGGCGAATGCATTATCGCGCCCATGGCCGAAAGGAGAGATGATTATTGCGAAAGCCCT  >  NC_000913/3334788‑3335078
                                                                                                                                                    |                                                                                                                                              
tatTCTGAATATTCACACTCTTTTGAGGAACTTTTTAGAGCAATAGGGCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATc                                                                                                                                                <  6:331985/149‑1 (MQ=255)
ccagataacccaggggtcagttcccagggctttcgcaataatcatctctcctttcggccatgggcgcgataatgcattcgccagcgttgaggaactcaaaccatttctgcgagattccgccgccattgacgttcccttcttgcgcaaac                                                                                                                                                <  3:293431‑M1/1‑1 (MQ=255)
     tGAATATTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCt                                                                                                                                           >  8:343717/1‑149 (MQ=255)
     tGAATATTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCt                                                                                                                                           >  7:33726/1‑149 (MQ=255)
         tatTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGAca                                                                                                                                       <  1:257009/149‑1 (MQ=255)
           ttCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGAcat                                                                                                                                      <  7:116516/148‑1 (MQ=255)
              acacTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCAtt                                                                                                                                  >  1:69395/1‑149 (MQ=255)
                acTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGc                                                                                                                                <  5:90212/149‑1 (MQ=255)
                 ctctTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCg                                                                                                                               >  1:11357/1‑149 (MQ=255)
                 ctctTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCTCAATGAAAGCGACTTACTTAAGGAGTGAGGAAATATGTAAAGTAATTTCATTTACTGGCATGCCGCTGAGATCATTGCg                                                                                                                               <  8:422408/149‑1 (MQ=255)
                     ttACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATTCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATATCATTGAGTGGCATACAGCTGACATCATTGCGGGtt                                                                                                                           >  1:309595/1‑149 (MQ=255)
                       aCAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTg                                                                                                                         >  1:137671/1‑149 (MQ=255)
                         aGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTgcg                                                                                                                       >  5:82970/1‑149 (MQ=255)
                            aaCTTTTTAGCGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTgcgc                                                                                                                      >  1:102687/1‑147 (MQ=255)
                              cTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCaag                                                                                                                   >  2:273072/1‑148 (MQ=255)
                                 tttAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGACGATGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGCCATCCCGCTGACATCATTGCGGGTTTGCGCaagaag                                                                                                                <  6:282582/148‑1 (MQ=255)
                                 tttAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGTGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAgg                                                                                                               >  3:38390/1‑149 (MQ=255)
                                 tttAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCaagaag                                                                                                                <  4:47298/148‑1 (MQ=255)
                                 tttAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCaagaag                                                                                                                <  5:326934/148‑1 (MQ=255)
                                 tttAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCaagaa                                                                                                                 <  7:97081/147‑1 (MQ=255)
                                 tttAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTGCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATAGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCaagaag                                                                                                                <  6:386334/148‑1 (MQ=255)
                                  ttAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAgg                                                                                                               <  6:82970/148‑1 (MQ=255)
                                     gagCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAAc                                                                                                           >  5:137296/1‑149 (MQ=255)
                                       gCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGt                                                                                                         <  2:70256/149‑1 (MQ=255)
                                             gtccATCAGGAGTATTGTGTTGCTAGACAGAAGAAGTGTTCTGAATGAAAGCTACTAACTTAAGGAGTGAGGAAAAATGTAAAGTAATTTCATTGACTGGCATCCCGCTGAGATATTTGAGGGTTTGCGCAAGAAGGGAACGTCAAtt                                                                                                    <  8:258134/146‑2 (MQ=255)
                                              gCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCaa                                                                                                                    >  5:178299/1‑131 (MQ=255)
                                              gCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATggc                                                                                                  >  8:417251/1‑149 (MQ=255)
                                                cATCAGGAGTATAGTGATGCTCGACAGAAGTAGTGTTCTGAATGAAAGCGACTAACTTATGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATggcgg                                                                                                <  2:187065/149‑1 (MQ=255)
                                                 aTCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATAATTGCGGGTTTGCGCAAGAAGGGAACGTCAATggcggc                                                                                               >  3:16848/1‑149 (MQ=255)
                                                 aTCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAAGTTCATTGACTGGCATCCCGCTGCCAGCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATggcggc                                                                                               >  8:359282/1‑149 (MQ=255)
                                                  tCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGgcggcg                                                                                              >  7:360721/1‑149 (MQ=255)
                                                  tCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGgcggcg                                                                                              <  5:248147/149‑1 (MQ=255)
                                                    aGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCaagaag                                                                                                                <  2:8050/129‑1 (MQ=255)
                                                    aGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGcggcgg                                                                                             >  8:154796/1‑148 (MQ=255)
                                                      gAGTATAGTGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAAt                                                                                          <  8:102833/149‑1 (MQ=255)
                                                           taGTGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCaa                                                                                                      >  5:400915/1‑132 (MQ=255)
                                                           taGTGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGc                                                                                     <  8:33726/149‑1 (MQ=255)
                                                           taGTGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGc                                                                                     <  2:11357/149‑1 (MQ=255)
                                                             gTGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCa                                                                                    <  6:117115/148‑1 (MQ=255)
                                                              tGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAg                                                                                   >  7:37186/1‑148 (MQ=255)
                                                              tGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCACAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAg                                                                                   >  6:234896/1‑148 (MQ=255)
                                                               gATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGa                                                                                  >  7:311359/1‑148 (MQ=255)
                                                                    tCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCaag                                                                                                                   >  1:188012/1‑110 (MQ=255)
                                                                    tCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCaag                                                                                                                   <  2:188012/110‑1 (MQ=255)
                                                                      gACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGttt                                                                          >  6:171047/1‑149 (MQ=255)
                                                                      gACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGttt                                                                          <  5:294193/149‑1 (MQ=255)
                                                                       aCAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGACAGTCAATGGCGGCGGATTCTCGCAGAAATGGttt                                                                          >  5:12548/1‑148 (MQ=255)
                                                                        cAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATAATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGa                                                                        <  4:16848/149‑1 (MQ=255)
                                                                         agaagaAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAg                                                                       >  5:286062/1‑149 (MQ=255)
                                                                          gaagaaGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGt                                                                      <  4:231309/149‑1 (MQ=255)
                                                                           aagaagTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGtt                                                                     >  8:145944/1‑149 (MQ=255)
                                                                           aagaagTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGtt                                                                     <  3:184589/149‑1 (MQ=255)
                                                                           aagaagTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGtt                                                                     >  6:402868/1‑149 (MQ=255)
                                                                            agaagTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTc                                                                    <  4:387123/149‑1 (MQ=255)
                                                                            agaagTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGGCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTc                                                                    <  3:302009/149‑1 (MQ=255)
                                                                                   gcgttgaggaactcaaaccatttctgcgagattccgccgccattgacgttcccttcttgcgcaaaCCCGCAATGATGTCAGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCg                                                                                      <  5:115280‑M1/59‑1 (MQ=255)
                                                                                     cTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTCCTCAAc                                                              <  1:277610/146‑1 (MQ=255)
                                                                                      tgaatgaaAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTCCTCAACGCTg                                                          >  2:338850/1‑149 (MQ=255)
                                                                                       gaatgaaAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTCCTCAACGCTgg                                                         >  3:360655/1‑149 (MQ=255)
                                                                                        aatgaaAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATgg                                                                             >  8:227270/1‑128 (MQ=255)
                                                                                        aatgaaAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTCCTCAACGCTGGc                                                        <  7:145944/149‑1 (MQ=255)
                                                                                            aaaGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTCCTCAACGCTGGCGaa                                                     <  7:343717/148‑1 (MQ=255)
                                                                                            aaaGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTCCTCAACGCTGGCGAAt                                                    <  6:137296/149‑1 (MQ=255)
                                                                                            aaaGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTCCTCAACGCTGGCGAAt                                                    <  7:417251/149‑1 (MQ=255)
                                                                                            aaaGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTCCTCAACGCTGGCGAAt                                                    <  7:233458/149‑1 (MQ=255)
                                                                                            aaaGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTCCTCAACGCTGGCGAAt                                                    <  6:286062/149‑1 (MQ=255)
                                                                                             aaGCGACTAACTTAAGGAGTGAGGAAAAATGGATAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTCCTCAACGCTGGCGAATg                                                   <  8:360721/149‑1 (MQ=255)
                                                                                                  aaccatttctgcgagattccgccgccattgacgttcccttcttgcgcaaaCCCGCTGACATCATTGCGGGTTTgc                                                                                                                        >  8:100745‑M1/51‑75 (MQ=255)
                                                                                                  aaccatttctgcgagattccgccgccattgacgttcccttcttgcgcaaaCCCGCTGACATCATTGCGGGTTTgc                                                                                                                        <  7:100745‑M1/25‑1 (MQ=255)
                                                                                                    tAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTCCt                                                                  >  2:270786/1‑127 (MQ=255)
                                                                                                    tAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTCCTCAACGCTGGCGAATGCATTATc                                            <  8:311359/149‑1 (MQ=255)
                                                                                                        ttAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTCCTCAACGCTGGCGAATGCATTATCgcgc                                        >  3:41761/1‑149 (MQ=255)
                                                                                                          aaGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTCCTCAACGCTGGCGAATGCATTATcgcg                                         <  8:190685/146‑1 (MQ=255)
                                                                                                          aaGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTCCTCAACGCTGGCGAATGCATTATcgcg                                         >  7:190685/1‑146 (MQ=255)
                                                                                                          aaGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTCCTCAACGCTGGCGAATGCATTATc                                            <  3:7774/143‑1 (MQ=255)
                                                                                                          aaGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTCCTCAACGCTGGCGAATGCATTATc                                            >  4:7774/1‑143 (MQ=255)
                                                                                                          aaGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTCCTCAACGCTGGCGAATGCATTATCgcgc                                        <  3:229985/147‑1 (MQ=255)
                                                                                                          aaGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTCCTCAACGCTGGCGAATGCATTATCGCGcc                                       >  7:238549/1‑148 (MQ=255)
                                                                                                               gTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTCCTCAACGCTGGCGAATGCATTATCGCGCCCATGGc                                 >  7:43076/1‑149 (MQ=255)
                                                                                                               gTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTCCTCAACGCTGGCGAATGCATTATCGCGCCCATGGc                                 <  1:273072/149‑1 (MQ=255)
                                                                                                                    taaaaaTGGAAAGTTATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCTGCGGAATCTCGCAGAAATGGTTTGAGTTCCTCAACGCTGGCGAATGCATTATCGCGCCCATGGCCGaaa                            <  6:173780/148‑1 (MQ=255)
                                                                                                                    gAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGt                                                                            >  5:254266/1‑101 (MQ=255)
                                                                                                                    gAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGt                                                                            <  6:254266/101‑1 (MQ=255)
                                                                                                                    gAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTCCTCAACGCTGGCGAATGCATTATCGCGCCCATGGCCGaaa                            <  1:338850/149‑1 (MQ=255)
                                                                                                                       aaaTGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTCCTCAACGCTGGCGAATGCATTATCGCGCCCATGGCCGAAAGga                         <  5:315282/149‑1 (MQ=255)
                                                                                                                       aaaTGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTCCTCAACGCTGGCGAATGCATTATCGCGCCCATGGCCGAAAGga                         <  5:171047/149‑1 (MQ=255)
                                                                                                                          tGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGc                                                                                     >  8:192832/1‑86 (MQ=255)
                                                                                                                          tGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTCCTCAACGCTGGCGAATGCATTATCGCGCCCATGGCCGAAAGgagag                      <  8:238549/149‑1 (MQ=255)
                                                                                                                            gAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGGTCCTCAACGCTGGCGAATGCATTATCGCGCCCATGGCCGAAAGgagaga                     <  7:175697/148‑1 (MQ=255)
                                                                                                                              aaGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTCCTCAACGCTGGCGAATGCATTATCGCGCCCATGGCCGAAAGGAGAgatga                  >  2:271186/1‑149 (MQ=255)
                                                                                                                                   aTTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTCCTCAACGCTGGCGAATGCATTATCGCGCCCATGGCCGAAAGGAGAGATGattatt             <  2:308838/149‑1 (MQ=255)
                                                                                                                                    tttCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAATTGAACGTCAATGGCGGCGGAATATCGCAGAAATGGTTTGAGTTCCTCAACGCTGGCGAATGCATTATCGCGCCCATGGCCGAAAGGAGAGATGATTATTg            <  2:137671/149‑1 (MQ=255)
                                                                                                                                      tCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGGCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTCCTCAACGCTGGCGAATGCATTATCGCGCCCATGGCCGAAAGGAGAGATGATTATTGc           <  7:328682/148‑1 (MQ=255)
                                                                                                                                       cATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTCCTCAACGCTGGCGAATGCATTATCGCGCCCATGGCCGAAAGGAGAGATGATTATTGCg          >  3:193244/1‑148 (MQ=255)
                                                                                                                                        aTTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTCCTCAACGCTGGCGAATGCATTATCGCGCCCATGGCCGAAAGGAGAGATGATTATTGCGa         <  4:139221/148‑1 (MQ=255)
                                                                                                                                           gACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTCCTCAACGCTGGCGAATGCATTATCGCGCCCATGGCCGAAAGGAGAGATGATTATTGCGAAAGc     >  4:380650/1‑149 (MQ=255)
                                                                                                                                            aCTGGCCTCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGGCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTGCTCAACGCTGGCGAATGCATTATCGCGCCCATGGCCGAAAGGAGAGATGATTATTGCGAAAGc     <  1:395443/148‑1 (MQ=255)
                                                                                                                                               ggCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTCCTCAACGCTGGCGAATGCATTATCGCGCCCATGGCCGAAAGga                         <  3:56368/125‑1 (MQ=255)
                                                                                                                                               ggCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTCCTCAACGCTGGCGAATGCATTATCGCGCCCATGGCCGAAAGga                         >  4:56368/1‑125 (MQ=255)
                                                                                                                                                gCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTCCTCAACGCTGGCGAATGCATTATCGCGCCCATGGCCGAAAGGAGAGATGATTATTGCGAAAGCCCt  <  4:193244/147‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                              
TATTCTGAATATTCACACTCTTTACAGGAACTTTTTAGAGCAATAGGCCATCAGGAGTATAGTGATGCTCGACAGAAGAAGTGTTCTGAATGAAAGCGACTAACTTAAGGAGTGAGGAAAAATGGAAAGTAATTTCATTGACTGGCATCCCGCTGACATCATTGCGGGTTTGCGCAAGAAGGGAACGTCAATGGCGGCGGAATCTCGCAGAAATGGTTTGAGTTCCTCAACGCTGGCGAATGCATTATCGCGCCCATGGCCGAAAGGAGAGATGATTATTGCGAAAGCCCT  >  NC_000913/3334788‑3335078

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.