New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1411899 =114 (1.250)26 (0.360) 21/208 NT 23.4% coding (50/936 nt) ttcA tRNA s(2)C32 thioltransferase, iron sulfur cluster protein
?NC_000913 = 1434958 79 (1.090)pseudogene (51/51 nt) ttcC pseudogene, prophage Rac integration site ttcA duplication;Phage or Prophage Related

Only 100 of 155 total aligned reads displayed.

AAAAATGGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTA  >  NC_000913/1434810‑1435105
                                                                                                                                                    |                                                                                                                                                   
aaaaaTGGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTAc                                                                                                                                                     <  8:129575/149‑1 (MQ=255)
aaaaaTGGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTAc                                                                                                                                                     >  5:92018/1‑149 (MQ=255)
  aaaTGGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGATAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACtt                                                                                                                                                   <  6:27329‑M2/149‑3 (MQ=255)
  aaaTGGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACtt                                                                                                                                                   >  2:188104‑M2/1‑147 (MQ=255)
    aTGGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgt                                                                                                                                                 >  1:286368‑M2/1‑145 (MQ=255)
        ggCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGTGAGTTGTGATTTTTGCCCTTACttgttc                                                                                                                                               >  8:106907‑M2/1‑141 (MQ=255)
        ggCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcag                                                                                                                                             >  4:764‑M2/1‑141 (MQ=255)
         gCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcagg                                                                                                                                            <  3:123777‑M2/149‑10 (MQ=255)
            aaaCGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttg                                                                                                                                         <  2:30414‑M2/149‑13 (MQ=255)
              aCGCTGCAAAAGGGTCAAAAAAGGGTCAAAACAAGAGTGGATTATTGTATCTTATTGTTGTCGGTCTTGATAATTAACACATTGAAAAAAATGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgta                                                                                                                                       >  8:160132‑M2/1‑135 (MQ=255)
                gCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtatt                                                                                                                                     >  5:381134‑M2/1‑133 (MQ=255)
                    cAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtatt                                                                                                                                     >  8:262718‑M2/1‑129 (MQ=255)
                    cAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtatt                                                                                                                                     <  7:262718‑M2/145‑17 (MQ=255)
                     aaaaggggcaaaaaaggggcaaAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgttct                                                                                                                                <  8:219162‑M2/149‑22 (MQ=255)
                      aaaggggcaaaaaaggggcaaaAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgttctt                                                                                                                               <  8:191114‑M2/149‑23 (MQ=255)
                       aagggtcaaaaaaggggcaaaaAAAGAGTGGATTAGCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgttcttt                                                                                                                              >  2:120774‑M2/1‑126 (MQ=255)
                       aaggggcaaaaaaggggcaaaaAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgttcttt                                                                                                                              <  5:277338‑M2/149‑24 (MQ=255)
                        aggtgcaaataaggggcaaaaaAAGAGTTGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgttctttc                                                                                                                             >  6:92018‑M2/1‑125 (MQ=255)
                         ggggcaaaaaaggggcaaaaaaAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgttctttct                                                                                                                            <  7:180508‑M2/149‑26 (MQ=255)
                         ggggcaaaaaacgggcaaaaaaAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgttctttct                                                                                                                            >  4:26293‑M2/1‑124 (MQ=255)
                          gggcaaaaaaggggcaaaaaaAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgttctttctt                                                                                                                           <  6:208392‑M2/149‑27 (MQ=255)
                           ggcaaaaaaggggcaaaaaaAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgttctttcttt                                                                                                                          >  5:35178‑M2/1‑122 (MQ=255)
                            gcaaaaaaggggcaaaaaaAGAGTGGATTATCGTAGCTTATTGTTGTAGCTTATGATATTTAACACATTGAAAAATAACTAAAATACTAATGCGTCAGAGAGTTGTGATTTTTGCCCTTACTGTTTAAGGTTGTAGTGTACTTTCTTAc                                                                                                                         >  6:231489/1‑149 (MQ=255)
                                 aaaggggcaaaaaaAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgttctttctttgtaatt                                                                                                                    >  5:177896‑M2/1‑116 (MQ=255)
                                     gggcaaaaaaAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgttctttct                                                                                                                            >  2:280793‑M2/1‑112 (MQ=255)
                                       gcaaaaaaAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGa                                                                                                              <  8:243868/149‑1 (MQ=255)
                                        caaaaaaAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGAt                                                                                                             >  2:376488/1‑149 (MQ=255)
                                         aaaaaaaGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGAtt                                                                                                            >  2:353980/1‑149 (MQ=255)
                                          aaaaaaGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGAttt                                                                                                           >  1:151348/1‑149 (MQ=255)
                                              aaGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgttctttctttgtaatttgttgattttctt                                                                                                       >  1:30414‑M2/1‑103 (MQ=255)
                                                  gTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACAt                                                                                                   <  6:106189/149‑1 (MQ=255)
                                                  ctGGATTATCGTAGCTTATTGTTGTCGCTGATGATAGTTAACACCTTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTGCTTTCTTACTAATTTCTTGATTTTGCGACAt                                                                                                   <  6:349572/148‑1 (MQ=255)
                                                   tGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACAtt                                                                                                  >  6:237625/1‑149 (MQ=255)
                                                   tGGATTATCGTAGCTTATTGTTGTCGCCGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgttctttctttgtaatttgttgattttcttgcat                                                                                                   <  3:361727‑M2/148‑51 (MQ=255)
                                                    ggATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCtt                                                                                                                >  1:271622/1‑134 (MQ=255)
                                                          tCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgttctttctttgtaatttgttgattttcttgcattatttca                                                                                            >  7:219162‑M2/1‑91 (MQ=255)
                                                          tCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTa                                                                                                                          <  1:281312/118‑1 (MQ=255)
                                                          tCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAg                                                                                            <  2:140176/148‑1 (MQ=255)
                                                          tCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTGCTTTCTTa                                                                                                                          >  2:281312/1‑118 (MQ=255)
                                                          tCGTAGATTATTGTTGTAGCTGATGATATTTAACACATTTAAAAATATGTAAAATTCTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgttctttctttgtaatttgttgattttcttgcattatttca                                                                                            >  3:252309‑M2/1‑91 (MQ=255)
                                                            gTAGCTTATTGTTGTCGCCGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgttcgttctttgtaatttgttgattttcttgcattatttcagt                                                                                          >  4:361727‑M2/1‑89 (MQ=255)
                                                                  tATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggtt                                                                                                                                          <  6:345189‑M2/94‑12 (MQ=255)
                                                                   aTTGTTGTCTCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCaa                                                                                    <  7:304411/147‑1 (MQ=255)
                                                                   aTTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgttctttctttgtaatttgttgattttcttgcattatttcagttctctgg                                                                                   >  8:180508‑M2/1‑82 (MQ=255)
                                                                   aTTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgttctttctttgtaatttgttgattttcttgcattatttcagttctctgg                                                                                   >  8:337405‑M2/1‑82 (MQ=255)
                                                                   aTTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgttctttctttgtaatttgttgattttcttgcattatttcagttctctg                                                                                    >  5:349360‑M2/1‑82 (MQ=255)
                                                                   aTTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCaa                                                                                    <  4:123777/147‑1 (MQ=255)
                                                                    ttgttgTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAAtt                                                                                  <  1:71362/148‑1 (MQ=255)
                                                                    ttgttgTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAAtt                                                                                  <  7:191114/148‑1 (MQ=255)
                                                                       ttgtCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgttctttctttgtaatttgttgattttcttgcattatttcagttctctggtact                                                                               <  7:126803‑M2/148‑71 (MQ=255)
                                                                        tgtCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTta                                                                             >  2:168872/1‑149 (MQ=255)
                                                                        tgtCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTta                                                                             >  7:373189/1‑149 (MQ=255)
                                                                          tCGCTTATGATATTTAACACATTGAAAAATAACTAAAATACTTATGAGTCAGAGAGTTGTGAATTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTtat                                                                            <  2:63594/148‑1 (MQ=255)
                                                                          tCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgttctttctttgtaatttgttgattttcttgcattatttcagttctctggtactaaa                                                                            >  7:426021‑M2/1‑75 (MQ=255)
                                                                          tCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTtata                                                                           >  1:240499/1‑149 (MQ=255)
                                                                              tgatgaTATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTAc                                                                                                                         <  4:362658/99‑1 (MQ=255)
                                                                              tgatgaTATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTAc                                                                                                                         >  3:362658/1‑99 (MQ=255)
                                                                              tgatgaTATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATgg                                                                        >  2:188840/1‑148 (MQ=255)
                                                                                atgatATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCa                                                                      <  7:107913/148‑1 (MQ=255)
                                                                                 tgatATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCAt                                                                     >  7:336500/1‑148 (MQ=255)
                                                                                 tgatATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTAGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATc                                                                    <  7:259829/149‑1 (MQ=255)
                                                                                  gatATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTatat                                                                          <  2:84406/142‑1 (MQ=255)
                                                                                  gatATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTatat                                                                          >  1:84406/1‑142 (MQ=255)
                                                                                  gatATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCAt                                                                     >  2:344202/1‑147 (MQ=255)
                                                                                    tatTTAACACATTGAAAAATAAGTATAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCag                                                                  >  5:287917/1‑148 (MQ=255)
                                                                                     atTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCg                                                                                >  5:24399/1‑133 (MQ=255)
                                                                                       ttAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGt                                                                               >  8:401553/1‑132 (MQ=255)
                                                                                          acacATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTTATTTTTGCCCTTCATTGTACAGGTTGTATTGTACTATCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAACAGTa                                                           <  5:149130/149‑1 (MQ=255)
                                                                                          acacATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTa                                                           <  1:353980/149‑1 (MQ=255)
                                                                                             caTTGAAAAATAATTAAAATTCTTATTAGTCATAGAGTTGTGATTTTTGCCCTTACTTGTTCAGTTTGTATTTTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTAGTTATATGTCATCAGAAGAGTATGc                                                        <  5:231489/149‑1 (MQ=255)
                                                                                              aTTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCg                                                       >  6:30599/1‑149 (MQ=255)
                                                                                              aTTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCg                                                       >  8:209131/1‑149 (MQ=255)
                                                                                               ttGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGt                                                      >  2:392231/1‑149 (MQ=255)
                                                                                                 gAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACttgttcaggttgtattgttctttctttgtaatttgttgattttcttgcattattt                                                                                              <  3:140885‑M2/107‑56 (MQ=255)
                                                                                                  aaaaaTAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCa                                                    <  5:30599/148‑1 (MQ=255)
                                                                                                                     aTGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATc                                                                    >  8:237486/1‑113 (MQ=255)
                                                                                                                         gTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGaaa                            >  6:218228/1‑149 (MQ=255)
                                                                                                                          tCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTTTATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGaaa                            <  4:27959/148‑1 (MQ=255)
                                                                                                                          tCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAAt                           >  2:155954/1‑149 (MQ=255)
                                                                                                                             gagagTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCt                         >  4:129845/1‑148 (MQ=255)
                                                                                                                              agagTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGa                       <  1:344202/149‑1 (MQ=255)
                                                                                                                                 gTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGatat                    <  2:240499/149‑1 (MQ=255)
                                                                                                                                    gtgATTTTTGCCCTTACttgttcaggttgtattgttctttctttgtaatttgttgattttcttgcattatttcagttctctggtactaaatggggcaaattgggggcaaactttgcaactacgataaccgcgcattcaacatggctatc                 <  5:402740‑M2/149‑133 (MQ=255)
                                                                                                                                    gtgATTTTTGCCCTTACttgttcaggttgtattgttctttctttgtaatttgttgattttcttgcattatttcagttctctggtactaaatggggcaaattgggggcaaactttgcaactacgataaccgcgcattcaaca                         >  7:225123‑M2/1‑17 (MQ=255)
                                                                                                                                    gtgATTTTTGCCCTTACttgttcaggttgtattgttctttctttgtaatttgttgattttcttgcattatttcagttctctggtactaaatggggcaaattgggggcaaactttgcaactacgataaccgcgcattcaaca                         <  8:225123‑M2/141‑125 (MQ=255)
                                                                                                                                    gtgATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGtt                                                                              >  2:302592/1‑88 (MQ=255)
                                                                                                                                    gtgATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATaa                  >  7:369037/1‑148 (MQ=255)
                                                                                                                                     tgATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATaaa                 >  5:322615/1‑148 (MQ=255)
                                                                                                                                      gATTTTTGCCCTTACTTCTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATaaaa                >  4:167473/1‑148 (MQ=255)
                                                                                                                                             gCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACtgtg         <  6:131679/148‑1 (MQ=255)
                                                                                                                                             gCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACtgtg         <  6:287917/148‑1 (MQ=255)
                                                                                                                                              cccTTACttgttcaggttgtattgttctttctttgtaatttgttgattttcttgcattatttcagttctctggtactaaatggggcaaattgggggcaaactttgcaactacgataaccgcgcattcaacatggctatctgttcgtcg        >  5:219334‑M2/1‑7 (MQ=255)
                                                                                                                                              cccTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGat                      >  1:59592/1‑134 (MQ=255)
                                                                                                                                              cccTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGat                      <  2:59592/134‑1 (MQ=255)
                                                                                                                                              cccTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGc       >  1:317534/1‑149 (MQ=255)
                                                                                                                                               ccTTACttgttcaggttgtattgttctttctttgtaatttgttgattttcttgcattatttcagttctctggtactaaatggggcaaattgggggcaaactttgcaactacgataaccgcgcattcaacatggctatctgttcgtcgtt      >  4:82502‑M2/1‑6 (MQ=255)
                                                                                                                                                cTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCgt     <  1:188840/149‑1 (MQ=255)
                                                                                                                                                  tACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGc                                    >  6:66036/1‑116 (MQ=255)
                                                                                                                                                   aCTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCgtgt   <  3:213137/148‑1 (MQ=255)
                                                                                                                                                   aCTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTa  >  7:232814/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
AAAAATGGGGCAAAACGCTGCAAAAGGGGCAAAAAAGGGGCAAAAAAAGAGTGGATTATCGTAGCTTATTGTTGTCGCTGATGATATTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTA  >  NC_000913/1434810‑1435105

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.