| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,424,646 | C→A | 6.7% | noncoding (2138/2904 nt) | rrlD ← | 23S ribosomal RNA of rrnD operon |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,424,646 | 0 | C | A | 6.7% | 432.1 / 7.5 | 164 | noncoding (2138/2904 nt) | rrlD | 23S ribosomal RNA of rrnD operon |
| Reads supporting (aligned to +/- strand): ref base C (78/71); new base A (2/11); total (80/84) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.76e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 168 total aligned reads displayed.
CTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACTGAGTCTCGGGTGGAGACAG > NC_000913/3424505‑3424794 | ctccGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCt > 2:63231/1‑148 (MQ=11)ctccGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATAAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCt > 2:115435/1‑148 (MQ=11) cGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTaa < 1:115435/147‑1 (MQ=32) cGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTaa < 3:140270/147‑1 (MQ=32) cGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑Gc < 1:59327/149‑1 (MQ=32) ttACTCTTTAGGAGGAGACCGCACCAGTCAAACTACCCACAAGACACTGTCCGCAACACGGATTACGGGTCAACTTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCAAACTTCTAA‑GCCt > 3:237075/1‑149 (MQ=11) ctctTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTcc < 5:152770/148‑1 (MQ=32) tctTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCa > 2:58609/1‑149 (MQ=32) tttAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCAcc > 5:328295/1‑149 (MQ=32) tAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCAc < 5:258361/146‑1 (MQ=32) tAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCAc < 3:97455/146‑1 (MQ=32) aggaggAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTAt > 4:91411/1‑149 (MQ=32) gaggagACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATcc > 1:128993/1‑149 (MQ=32) gaggagACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTACCACATATcc > 3:266845/1‑149 (MQ=17) acgagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGCTCAACGTTAGAACAACAAACATAAAAGGCTGGTATTTCAAGGTAGGCTCCATGCACACTGGCCTCCACACATCTAA‑GCCTCCCACCAATcc > 2:285272/3‑148 (MQ=11) agaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTaca < 5:166185/149‑1 (MQ=32) agaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTaca < 7:308970/149‑1 (MQ=32) aCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCCGATTACGCGTCAACGTTAGAACAACAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCACACTGGCGTCCACACTTCTAA‑GCCTCCCAACTATCCTAcaca > 4:61920/1‑149 (MQ=11) cccAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAg < 1:58609/149‑1 (MQ=32) ccAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGGGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAgg < 1:250404/149‑1 (MQ=17) aGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCt > 2:327426/1‑136 (MQ=32) gTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCt > 8:81780/1‑148 (MQ=32) tCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTc > 7:277795/1‑148 (MQ=32) tCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTc > 6:143407/1‑148 (MQ=32) aaCTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATg > 4:192063/1‑149 (MQ=32) tACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCCTGCAGCCTGGCGGCCACACTTCTAA‑GCCTCCCACCTATCCTACCCATCAAGGCTCAATGtt > 3:267448/1‑148 (MQ=255) tACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGtt > 7:237204/1‑148 (MQ=32) tACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGtt > 7:74400/1‑148 (MQ=32) aCCCCCCCGACCCTGTCCGCAACCCGGATTACGGTTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGAATTTTTTTTTAATTTTTAT‑GCGTCCAACGTTTTCTACACATCAAGGCTCAATGTTCa < 8:122500/149‑1 (MQ=2) cccACCAGACACTGTCCGCAACCCGGCTTACCGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAg < 1:84351/149‑1 (MQ=17) cccACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCa < 1:236981/148‑1 (MQ=32) cccACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAg > 8:226037/1‑149 (MQ=32) cccACAAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTAAg > 2:23921/1‑149 (MQ=17) ccaccaGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCAAGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAgt < 7:223939/149‑1 (MQ=17) accaGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAgtgt > 2:275321/1‑149 (MQ=32) caGACACTGTCCGCAACCCGGATTACGGGGCAACGATAGAACATAAAACATTAAAGGGTGGTATTTCAAGGTCGGCGCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCACAAGGTTCATTGTc > 5:227600/1‑148 (MQ=11) aGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTc > 6:8034/1‑147 (MQ=32) acacTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGc > 5:145369/1‑149 (MQ=32) acTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAATGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCta < 1:98878/149‑1 (MQ=17) acTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATTCATACTTTTTTTATAATTTTTAT‑GCGTCCAACGTTTTCTACACATCAAGGCTCAATGTTCAGTGTCAAGCta < 8:115443/149‑1 (MQ=11) cTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCACACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCtat < 1:294316/149‑1 (MQ=17) tCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCATAATTGTTTTTAAATTTTTAT‑GCGTCCAACGTTTTCTACACATCAAGGCTCAATGTTCAGTGTCAAGCtata < 2:260337/147‑1 (MQ=11) gCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTaa < 3:39471/93‑1 (MQ=33) aaCCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCATCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAgg > 5:262085/1‑149 (MQ=17) aCCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGt > 8:258658/1‑149 (MQ=32) cccGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGtt > 1:266479/1‑149 (MQ=32) ccGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGtt > 1:139830/1‑148 (MQ=32) ccGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGtt > 8:127590/1‑148 (MQ=32) gATTACGGGTCAACGTTATAACATCAAACATTAAAGGGTGGTATTTCAAGTTCGGCTCCCTGCAGACTGGCGTCCAGACTTCTAT‑GCCTCCCACCTATCGTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACg < 1:285272/149‑1 (MQ=11) tCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTc < 7:81780/149‑1 (MQ=32) cGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGCCTCAATGTTCAGAGTCAAGCTATAGTAAAGGTTCACGCGGACTTTACGTc > 1:194708/1‑149 (MQ=11) ttAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTATTTACGTCtt > 3:19151/1‑149 (MQ=17) gAAAATCAAACATTAAATGGTGGTATTTCAATGTCGGCTCCATGCAGATTTTTTTTTTAATTTTTAT‑GCGTCCAACGATTTCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGc < 4:266845/148‑1 (MQ=2) aCATCAAACATTAAAGGGGGGTATTTCACGGTCGGCTCCATGCAGACTGGCGGCCACACTTCTAA‑GCCTCCCACCTCTCCTACACCTCAAGGCTCAATGTTCATTGTCAAGCTATAGTAAAGGTTCACGGGGGCTTTCCGTCTTGCcgc < 7:82622/149‑1 (MQ=11) cagcAAACATTAACGGGTGGTATTTCAAGGTCGTCTCCATGCAGA‑TTTTTTTTTTAATTATAATGCGACCAACGATTTCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCcgcg < 4:176931/146‑1 (MQ=0) aTCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCgg < 1:243872/149‑1 (MQ=32) aTCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCgg < 5:136021/149‑1 (MQ=32) tCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCggg > 4:182489/1‑149 (MQ=32) tCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCggg > 4:102993/1‑149 (MQ=32) tCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATAAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCAGCggg > 3:115068/1‑149 (MQ=17) cAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCggg > 6:326732/1‑148 (MQ=32) cAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTAACGGGGTATTTCCGTCTTGCCGCggg > 1:39670/1‑148 (MQ=17) aaCATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTa > 7:132354/1‑148 (MQ=32) aTTAAAGGGTTGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACt < 5:89233/149‑1 (MQ=17) aTTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACt > 8:35700/1‑149 (MQ=32) ttAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTg > 6:134902/1‑149 (MQ=32) aaaGGGTGGTATTTCAAGGTCGGCTCCATGCAGAATGGCGTCAACACTTCTAA‑TCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGc < 6:227600/148‑1 (MQ=12) aaGGGTGGTATTTCAAGGTCGGCTCCATGCAGATTGGTTTTAAAACTTCTAA‑GCCTCCAACCTTTGCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCa < 6:192187/148‑1 (MQ=11) aaGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCAt > 8:280627/1‑149 (MQ=32) ggtgttATTTCAAGGTCGGCTCCATGCAGACTGGCGTACAAACTTATAA‑GCCTCCCACGTATTCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCtt < 2:76648/149‑1 (MQ=11) tggtATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATTCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACt < 2:335400/140‑1 (MQ=17) ggtATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTca > 5:326454/1‑148 (MQ=32) tttCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCAc < 3:149416/105‑1 (MQ=32) tttCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGc > 8:73782/1‑148 (MQ=32) tttCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGc > 2:155623/1‑148 (MQ=32) tttCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGc > 4:136502/1‑148 (MQ=32) tttCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGc > 7:192870/1‑148 (MQ=32) tccaGGTCGGCTCCATGCAGACTGTCGTTATCATTTCTAA‑GCCTCCAACGTTTCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGa < 2:39670/145‑1 (MQ=11) tCAAGGTCGGCTCAATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTGAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCGCAGCGAg > 3:59306/1‑149 (MQ=12) aaGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGt < 7:127590/148‑1 (MQ=32) aaGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCGCAATGTTCAGGGTCAAGCTATAGTAAAGCTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGtt > 2:209615/1‑149 (MQ=12) aGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTc < 7:68669/149‑1 (MQ=32) tCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCCCCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAAt > 7:104725/1‑149 (MQ=17) tCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCTGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAAt < 6:328295/149‑1 (MQ=17) tCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCttt < 7:152938/106‑1 (MQ=32) tCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCttt > 8:152938/1‑106 (MQ=32) cTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTATCCGTCTTGCCGCGGGTACACTGCATCTACACAGCGAGTTCAATTTCa > 6:144418/1‑149 (MQ=17) ccATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTCCACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGGCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACt < 5:143407/149‑1 (MQ=17) cATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCAc < 3:300336/147‑1 (MQ=32) cATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACt > 6:213134/1‑148 (MQ=32) cATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACt < 7:265347/148‑1 (MQ=32) aTGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACt > 5:181325/1‑147 (MQ=32) gACTGGCGTGCACACTTCTTA‑GCCTCCCACCTTTCATACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACTGAGtctc < 2:260853/149‑1 (MQ=255) aCTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACTGAGTCTCg > 5:35566/1‑149 (MQ=32) cTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGTTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACTGAGTCTCgg < 3:67511/149‑1 (MQ=17) cTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACTGAGTCTCgg < 3:192063/149‑1 (MQ=32) tGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGc < 1:221029/113‑1 (MQ=32) gtagtttacacTTCTAA‑GCGTCCAACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACTGAGTCTCggg < 2:194708/141‑1 (MQ=255) gTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACTGAGTCTCGGGTGga < 7:42740/149‑1 (MQ=32) acatTTTTAA‑GCCTCCCACGTTTTCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACTGAGTCTCGGGTGGAGAc < 8:192870/148‑1 (MQ=11) | CTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACTGAGTCTCGGGTGGAGACAG > NC_000913/3424505‑3424794 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |