New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4621634 =	46 (1.230)	8 (0.230)	8/230	3.0	16.6%	intergenic (+32/‑135)	deoD/yjjJ	purine nucleoside phosphorylase 1; nicotinamide 1‑beta‑D‑riboside phosphorylase/putative protein kinase
	?	NC_000913	4621662 =	38 (1.110)					intergenic (+60/‑107)	deoD/yjjJ	purine nucleoside phosphorylase 1; nicotinamide 1‑beta‑D‑riboside phosphorylase/putative protein kinase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GTCAGCTCGCTCATTAATGAATAGATTCGTGAATAGATACTTGAATAGATTTATTAACACATTTCACTGAAAAGTATAGCGAAAATATTCAAGCTGGAGAGAAAAATGAATAGATACTAAAAAGCCGGAGCAGTCTCCCGCTCCGGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4621782‑4621634 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctccggcttTTTAGTATCTATTCATTTTTCTCTCCAGCTTGAATATTTTCGCTATACTTTTCAGTGAAATGTGTTAATAAATCTATTCAAGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTT  >  NC_000913/4621662‑4621790                                                                                                                                                                                                                                                                                        GTCAGCTCGCTCATTAATGAATAGATTCGTGAATAGATACTTGAATAGATTTATTAACACATTTCACTGAAAAGTATAGCGAAAATATTCAAGCTGGAGAGAAAAATGAATAGATACTAAAAAGCCGGAGCAGTCTCCCGCTCCGGCTT                                                                                                                                   >  3:64027/1‑149     GCTCGCTCATTAATGAATAGATTCGTGAATAGATACTTGAATAGATTTATTAACACATTTCACTGAAAAGTATAGCGAAAATATTCAAGCTGGAGAGAAAAATGAATAGATACTAAAAAGCCGGAGCAGTCTCCCGCTCC                                                                                                                                        <  1:105363/140‑1     GCTCGCTCATTAATGAATAGATTCGTGAATAGATACTTGAATAGATTTATTAACACATTTCACTGAAAAGTATAGCGAAAATATTCAAGCTGGAGAGAAAAATGAATAGATACTAAAAAGCCGGAGCAGTCTCCCGCTCC                                                                                                                                        >  2:105363/1‑140                                                                          GTATAGCGAAAATATTCAAGCTGGAGAGAAAAATGAATAGATACTAAAAAGCCGGAGCAGTCTCCCGCTCCGGCTTTTTAGTATCTATTCATTTTTCTCTCCAGCTTGAATATTTTCGCTATACTTTTCAGTGAAATGTGTTAATAAAT                                                          >  1:68911/1‑149                                                                                         TCAAGCTGGAGAGAAAAATGAATAGATACTAAAAAGCCGGAGCAGTCTCCCGCTCCGGCTTTTTAGTATCTATTCATTTTTCTCTCCAGCTTGAATATTTTCGCTATACTTTTCAGTGAAATGTGTTAATAAATCTATTCAAGTAT                                              <  5:33461/146‑1                                                                                         TCAAGCTGGAGAGAAAAATGAATAGATACTAAAAAGCCGGAGCAGTCTCCCGCTCCGGCTTTTTAGTATCTATTCATTTTTCTCTCCAGCTTGAATATTTTCGCTATACTTTTCAGTGAAATGTGTTAATAAATCTATTCAAGTAT                                              >  6:33461/1‑146                                                                                                                  ATACTAAAAAGCCGGAGCAGTCTCCCGCTCCGGCTTTTTAGTATCTATTCATTTTTCTCTCCAGCTGGAATATTTTCGCTATACTTTTCAGTGAAATGTGTTAATAAATCTATTCAAGTATCTATTCACGAATCTATTCATTAATGAGC                  >  7:96944/1‑149                                                                                                                      TAAAAAGCCGGAGCAGTCTCCCGCTCCGGCTTTTTAGTATCTATTCATTTTTCTCTCCAGCTTGAATATTTTCGCTATACTTTTCAGTGAAATGTGTTAATAAATCTATTCAAGTATCTATTCACGAAT                                  <  1:28273/129‑1                                                                                                                      TAAAAAGCCGGAGCAGTCTCCCGCTCCGGCTTTTTAGTATCTATTCATTTTTCTCTCCAGCTTGAATATTTTCGCTATACTTTTCAGTGAAATGTGTTAATAAATCTATTCAAGTATCTATTCACGAAT                                  >  2:28273/1‑129                                                                                                                         AAAGCCGGAGCAGTCTCCCGCTCCGGCTTTTTAGTATCTATTCATTTTTCTCTCCAGCTTGAATATTTTCGCTATACTTTTCAGTGAAATGTGTTAATAAATCTATTCAAGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGA           >  2:94754/1‑149                                                                                                                                  GCAGTCTCCCGCTCCGGCTTTTTAGTATCTATTCATTTTTCTCTCCAGCTTGAATATTTTCGCTATACTTTTCAGTGAAATGTGTTAATAAATCTATTCAAGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTT  <  8:96944/149‑1                                                                                                                                                                                                                                                                                        GTCAGCTCGCTCATTAATGAATAGATTCGTGAATAGATACTTGAATAGATTTATTAACACATTTCACTGAAAAGTATAGCGAAAATATTCAAGCTGGAGAGAAAAATGAATAGATACTAAAAAGCCGGAGCAGTCTCCCGCTCCGGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4621782‑4621634 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctccggcttTTTAGTATCTATTCATTTTTCTCTCCAGCTTGAATATTTTCGCTATACTTTTCAGTGAAATGTGTTAATAAATCTATTCAAGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTT  >  NC_000913/4621662‑4621790

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.